Clinocottus analis (woolly sculpin): 137783640
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Entry
137783640 CDS
T10471
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cana03009
]
137783640 (ddx55)
Enzymes [BR:
cana01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137783640 (ddx55)
Ribosome biogenesis [BR:
cana03009
]
Eukaryotic type
Pre-60S particles
Helicases
137783640 (ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Cas3-like_C_2
SBF_like
Helicase_C_2
YbjM
Motif
Other DBs
NCBI-GeneID:
137783640
NCBI-ProteinID:
XP_068429905
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MENSTEGTWDSLPVKLTDGILKTLEEVKFTHMTPVQSACIPLFMSNKDVAAEAVTGSGKT
LAFVIPIIELLLRREEKLKKMQVGALVVTPTRELALQISEVMALFIQKFPQFTQILLIGG
TNPMDDVEKFKDKGANIVIATPGRLEDMFRRKGDGLDLAGYVKSLDVLVLDEADRLLDMG
FEASLNTILGHLPKQRRTGLFSATQTQELEKLVRAGLRNPVRIAVKEKGVAASAAAQKTP
SRLCNYYTICRTENKFNNLVAFLRQNKLEKHLVFFSTCACVEYYGRALETLVKKVTVLCI
HGKMKSKRNKIFADFRALKSGILVCTDVMARGIDIPDVNWVLQYDPPSSASAFVHRCGRT
ARIGNQGNALVFLLPMEESYINFLSINQKCPLQKKVLAGEVLDVLPKVKALSLADRAMFD
RGMRAFVSYVQAYAKHECSLIFRLKDLDLARLAQGFALLRMPKMPELKGKTFPGFSRTPL
DTDTIRYKDKQREKQRQKMLAELKEKVKEPFVKKNFIKNKSWSKTKTKTERRKKRSAKRK
REEGSDVEDEDLKELLKDTRLLKRLKKGQISEEDFEKQITSETTSKPAVAGAPGAEEA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggagaactctaccgaagggacgtgggacagtttaccggttaaactcacggacgggatt
ttaaagacgctcgaggaagtcaagttcacgcacatgacacctgttcagtctgcttgtatt
ccgctcttcatgagtaacaaagatgtggctgctgaggcggtgaccggcagcggaaagacg
ctggccttcgtcatccccatcatagagctgctcctgaggagagaagagaagctgaagaag
atgcaggtcggtgctctggtggtcactccgacgagagaactggcccttcagatcagcgaa
gtgatggcactcttcatccagaagtttcctcagtttacgcagattttgctgattggtggc
accaacccgatggacgacgtggagaagttcaaggacaaaggtgccaacattgtgattgcg
acaccgggccgtctggaggacatgttcaggaggaagggggacggtctggacctcgccggc
tatgtgaagagtctggacgttctggttctggacgaagccgaccggctgctggacatgggc
ttcgaggccagtctgaacaccatcctgggccacctgcccaaacagcggcggacgggcctg
ttctcggccacgcagacgcaggagctggagaagcttgtgcgcgccggcctgaggaacccg
gtgcgcatcgccgtgaaggagaagggtgtcgccgccagcgccgccgcgcagaagacgccg
tcacgcctctgcaactactacaccatctgcagaacagagaacaagttcaacaacttggtg
gcgtttttacggcaaaacaaactggagaagcatctggtcttcttcagtacatgtgcgtgt
gtggagtactacggccgtgctctggagacgctggtgaagaaggtgacggtgctctgcatc
cacggcaagatgaagagcaaacgcaacaagatctttgccgacttccgggccctgaagagt
gggatcctggtgtgtacggacgtgatggcccgggggatcgatatccccgacgtcaactgg
gtgctgcaatacgacccgccgagcagcgccagtgcgtttgtgcatcggtgcggccgcacg
gctcgtatcggtaaccagggcaacgccctcgtcttcctgctgccgatggaggagtcctac
atcaactttctgtccatcaaccagaagtgtcccctccagaagaaggtcctggcgggcgag
gtcctggacgtgcttcccaaagtgaaggccctgtctctggccgacagagccatgttcgac
cgcggcatgcgggcattcgtgtcgtacgtgcaggcctacgccaagcacgagtgcagcctc
atcttcaggctcaaagatctggacctcgcccgcctggcccaaggctttgcgctcctccgc
atgccgaagatgccggagctgaaggggaagacgttccccggcttcagccgcacgccactg
gacactgacaccatccgctacaaggacaagcagcgcgagaagcagcggcagaagatgctg
gccgagctgaaggagaaggtgaaggagcccttcgtcaagaagaacttcatcaagaacaaa
tcctggtctaagaccaagaccaagacggagcgccggaagaagaggtcggccaagaggaag
cgcgaagagggctccgacgtggaggacgaggacttaaaggagcttttaaaagacactcgc
ctcctcaagcggctgaagaaaggtcagatcagcgaggaggactttgagaagcagatcacg
agcgagacgacgtccaaacccgccgttgccggagcgccaggggccgaggaggcgtga
DBGET
integrated database retrieval system
