Clinocottus analis (woolly sculpin): 137783683
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Entry
137783683 CDS
T10471
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137783683
03041 Spliceosome [BR:
cana03041
]
137783683
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
137783683
Spliceosome [BR:
cana03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
137783683
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_Nup35
Calcipressin
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
137783683
NCBI-ProteinID:
XP_068429995
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MDDDQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEYRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT
NETPNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDMVSPIQQVQMPQQSTVSFAAQP
YSQWGQWYSNTAAAQQIGQYVPNGWQVPSYGVYGQGWDQQGYNHLHAGAGWTGVGAVSNG
AMVEPGQGVNGAVLTNTAGMSTAGYHTH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaccagcctaaaacgctgtatgtggggaatctgtcccgggacgtgacagag
gccctcatcttggagttgtttggccagattggaccctgcaaaagctgcaaaatgatagta
gatacggcaggtcatgatccatactgctttgtggagttctatgaatatagacatgccact
gccacaatcgcagccatgaatggtcggaaaatactgggtaaggaggtcaaggtcaactgg
gccacgacgccaaccagccaaaagaaagacacaagtagtcactttcacgtctttgttgga
gatttaagtcctgaaatcaccacagatgatataaaagcagcattcgctccatttgggaaa
atatcggattgtcgagtggtgaaagacatggccacaggtaaatctaaaggctatggcttt
gtctccttcttcaacaaatgggatgcggagaatgccatacagcagatgggaggacagtgg
ctgggaggaaggcagatccggaccaactgggccacaaggaagcctgccccgaaaactaca
aacgagacgcccaacaccaagcagctatcctttgacgaggtggtgaaccagtccagcccc
agcaactgcaccgtctactgcgggggagtcacaacaggcctcacagagcaaatcatgaga
cagaccttctcgccttttggccaaataatggaaatccgggttttcccagacaaaggctac
tcgtttgtgaggttcaactcccacgaagcagccgctcatgccatcgtgtctgttaacggt
acgtccatagagggctacgttgtgaagtgttactggggcaaagaaacgacagacatggtc
agccccatccagcaggtacagatgccccagcagagcacggtgagcttcgcggcgcagccc
tacagccagtggggtcagtggtacagcaacacggccgccgcccagcagattgggcagtac
gtgcccaacggatggcaggtgccgagctacggcgtctacggacagggctgggatcagcag
ggatacaatcatttacatgccggtgccggatggaccggcgtgggcgccgtgagcaacggg
gccatggtggagccggggcagggcgtcaacggggccgtgctcaccaacacggccggcatg
agcactgccggctaccacacccactga
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