Clinocottus analis (woolly sculpin): 137783779
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Entry
137783779 CDS
T10471
Symbol
pdlim5b
Name
(RefSeq) PDZ and LIM domain protein 5b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
137783779 (pdlim5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cana04990
]
137783779 (pdlim5b)
Domain-containing proteins not elsewhere classified [BR:
cana04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
137783779 (pdlim5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
Zn_ribbon_IS1595
PDZ_2
Motif
Other DBs
NCBI-GeneID:
137783779
NCBI-ProteinID:
XP_068430189
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MSSSYSVSLAGPAPWGFRLQGGKDFCMPLTISRLTEAGKAARAKMSVGDIILSINGVSTD
GINHLDAQNKIKACTGNLSLTVQRPSSAPKDGVPKDEPQEIIKPVPITHPATSTAYTKPS
SQPSAAYNKTARPFGGDGGVVTASSPAAPTIPSQSSAFKPAAPSQPPQPPFLLKSSLPAT
DSPPATSVPVPGPARHTFTSPSASSSSSNSSSPARVTAPSSHPNVPQPSVYNTPINLYSN
TNACEAVIGQRRGLLESQGLSDAFNGKLNLEEHALSDASKKRLIEDTEDWHPRSGTSQSR
SFRMLAQLTGTENESVAENSGKKTFYICFSSEGLDKSSPAAHTSPAAKTFSKSAASPRNG
NSVPASTFKSPVVQNKPSFQPGGPTGFLKAGAAPSFGNVTNLPKGPDRPTPQPHPQDLKC
VVQRAEHIPAGTRTPMCNKCNNVIRGPFLVAMGMSWHPEEFNCAHCHSSLTENGFVEERG
QVYCGHCYEQFFAPTCARCQQKILGEVMNALKQTWHVSCFVCVGCQQPIRGNTFHMEDGQ
PYCEIDYYKLFGSSCHGCDFPIEAGDKFLDALGFTWHDTCFVCAVCSTSLEGQKFFSKKD
KPLCKKHAHSVNV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagctacagtgtctccctggccggcccggccccctggggcttcagactgcaa
ggggggaaggatttctgtatgcccctcaccatctcacggctgaccgaagccggcaaagca
gccagagccaagatgagtgttggagacatcattctgtccattaatggcgtttccacagat
ggcataaatcacctcgacgcccagaacaagattaaggcctgcacaggcaatctcagcctc
actgtccagagaccctccagtgccccgaaagatggagtaccgaaggacgaacctcaagag
atcattaagcctgtcccaatcactcaccccgccacgagcaccgcatacaccaagccgtcc
agtcagcccagtgctgcgtacaacaagacagcccggccttttgggggcgacggcggcgtg
gtcacagcttcctccccggctgcccccaccattccctcacaatcctccgctttcaagcca
gctgccccttctcagccaccgcagcctccgtttctgctgaagtcgagcctccctgccacg
gactcgcctcccgccacctcggttcccgtgcccggccccgctcgccacaccttcacttcc
ccgtccgcctcttcctcctcatctaactcctcttctccagctcgagtgacagcaccctcc
tcccatcctaatgtcccacagccgtccgtctataacacgccgatcaacctctactccaac
accaatgcatgtgaggcggtcattggacagagacgcggccttttggaaagccaggggctg
tcagacgccttcaatgggaaactcaatctggaggagcacgcactgagcgatgccagcaag
aagcgtctgattgaggacacagaggattggcatccgaggtctggcacctcccagtcccgc
tctttccgtatgctggctcagctcaccggcactgaaaatgagtccgttgcagagaacagt
ggaaagaaaacattttacatctgtttttctagtgagggacttgacaaaagctctcctgct
gcgcacacctcgcctgcagccaaaacattttccaaatctgcagcatcgcccaggaatggc
aacagcgtccctgcttccacgtttaagagtccagtggtccagaacaagccttccttccag
cccgggggtccaacaggttttctcaaggctggagcagctccttcatttggcaacgtgacc
aaccttcccaaaggtccagatcggcccaccccacagccacacccacaggacctcaagtgt
gtggtgcagcgggctgagcacatcccggccgggactcgcaccccaatgtgcaacaagtgc
aacaacgtcatcaggggcccattccttgtggccatgggcatgtcatggcacccagaggaa
ttcaactgtgctcactgccactcctccctgacagagaacgggtttgtggaggagagaggc
caagtgtactgtgggcattgctacgagcagttcttcgctcccacctgcgcccgctgccag
cagaagattctgggggaagtcatgaatgccctgaaacagacctggcatgtgtcctgtttc
gtctgcgttggctgccagcagccaatcagaggcaacacatttcacatggaggatggacag
ccatactgtgaaatagactactacaagctgtttgggtccagttgccacggctgtgacttc
cccatcgaggccggggacaagttcctggatgctctgggattcacctggcatgacacctgc
tttgtgtgtgcggtctgctctactagtctggaaggtcagaagttcttctccaaaaaagac
aagccgctgtgcaagaaacatgcccacagtgtcaacgtctga
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