Clinocottus analis (woolly sculpin): 137783858 Help Entry 137783858         CDS       T10471                                  Symbol si:ch211-196i2.1 Name (RefSeq) collagen alpha-2(I) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism cana  Clinocottus analis (woolly sculpin) Pathway cana04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cana00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     137783858 (si:ch211-196i2.1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cana00536]     137783858 (si:ch211-196i2.1) Glycosaminoglycan binding proteins [BR:cana00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    137783858 (si:ch211-196i2.1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_3 Laminin_G_2 Laminin_G_1 Motif Other DBs NCBI-GeneID:  137783858 NCBI-ProteinID:  XP_068430297 LinkDB All DBs Position Unknown AA seq 1543 aa AA seqDB search MFCGWLKWTLCLLGLTTTSCAAPDDAKVDFGGESGSGTLQTDEVDVLQELSLQVSNSSNA SMTADGSRCPVLQVGQYSTLALPLQQLLADGFADEFSVLVQLRSPQRDERSVFTMLSPDS SVMLQLRISAYAIIFIGTHQRHYEFPVSGLADGKWHHVAVSVSAKRLALYVDCSLLESVD WVYQGMGISTDGLLMIGGIIEGFETPFEGHLRQLTLLMGDPDAAGRHCSHHPPRCGETAH KPPRSTRAHSAPEDIFRSRGTSRGDGTVPSGSIRKGAVGRGDVFVVDEDTDLLDPIFQNG GQVNPRWKPSGNGLKGSQKEKTELSSKQLEENITTDKKVDSGGRTSPLFPGKPSGDIIDL DKGNATKKPAVTFPVPKIPSDPRTSTDSGTSAKAVVKGGRPITTVQQPDREHPAIVTIVS RDGDLVLGSDGAMYRLQSGPSGRMGPPGQEGCPGEPGLLGLKGDKGKLGPEGRGGKTGEP GPPGPAGLPSLYLWKNTAEEWAAFQKTNFYQLLRTGWPSKEGPEGPPGEMGRPGIKGPPG DAGERGQPGTPGEMGERGLRGLPGKAGASGRDGVNGDDGQPGSPGAAGSQGPWGYRGERG SKGEKGDEGLIGLKGPRGDIGEPGEKGSTGLPGPPGPVGQPGPKGTRGGSGPEGPCGPDG ESGLDGPPGPPGLTGAAGFTGRVGAQGVNGSRGDMGPAGSVGPKGPQGPSGVEGQMGHPG LRGTQGHLGLVGAAGPKGDPGPVGPVGARGDLGFEGPMGAAGRQGPMGFPGLIGNRGPDG DKGDRGPGGDKGIQGAAGIRGPQGERGPNGFPGFTGTKGQSGPKGIEGNRGPDGRNGKPG PRGNKGRTGQRGHSGQPGPSGPSGAAGSAGSKGPSGPPGKPGPPGSPGLLGDKGFTGKPG MEGPQGSGIQGTVGMRGPPGFTGERGLPGTSGDKGPRGPQGRSGDEGSKGIQGPPGSPGL PGVDGAVGKPGPRGSQGPPGPQRPHGPAGIPGPRGADGVLGAAGERGHKGLPGSLGDAGP PGQDGQQGLPGQTGNEGPTGRKGDQGDQGSCGKLGPPGLTGERGLEGSKGSQGPPGPDGK EGDVGHPGEVGDPGPEGEKGELGPLGLSGREGPWGDLGENGLRGQKGDKGHIGLMGEPGL MGEGGPAGLAGLQGITGSRGPLGPDGPQGQKGESGSDGVTGPPGSQGPQGMTGARGVRGD TGGLGPPGSGGQVGPQGDTGAKGEEGPQGLKGEPGAPSPPGEQGPPGEMGPQGPPGPTGA PGVQGRAGPEGKQGMPGEKGGDGKNGSQGKTGHVGRRGKRGRAGVRGSRGDRGSKGQKGD TGQAGHSGWPGLIGIAGLRGETGDQGEKAKEGEKGDMGLPGPPGNDGMEGIRGIFGLPGP PGLIGEQGNIGPPGPRGTPGMPGLPGLFGLKGLKGYQGFSGLPGRRGLPGPPGEPGPPGQ SLNMTLTQLKDLMYVSDKPNYPLLQTLLDSLQQELRLLLDPPDGSKEHPATTCLELWICH PEYSSGMYYIDPNQGSTADALLAYCSFSSTSKQTCLHPRDSQV NT seq 4632 nt NT seq  +upstreamnt  +downstreamnt atgttctgcgggtggttgaaatggacgctgtgcctcctcgggctcacaacgacgagctgc gccgcgccggacgacgccaaggtggattttggaggcgagtccggctccgggacgcttcag acagatgaggtggacgttctgcaggagctttccctccaggtgtccaacagcagcaacgcc tccatgaccgcggatggcagcaggtgtccagtcctgcaggtgggacagtactccaccttg gctctccctcttcagcagctcctcgctgacggctttgcagatgagttcagtgtcctggtg cagctgaggagccctcagagagacgagcgcagcgtcttcaccatgctcagcccggacagc agcgttatgctgcagctgcggatcagcgcctacgccatcatcttcataggaacacaccag cgacactatgagttcccagtcagcggcctggcggatggaaagtggcaccatgtggccgtc agcgtgtctgccaagcggctggcgctgtatgtggactgctctctgctggagagcgtggac tgggtctaccagggcatggggatcagcaccgacggtctgctcatgatcggaggcatcatc gagggctttgagactccatttgagggtcatctccgacagctgaccctcctgatgggcgac ccggacgccgccgggcgacactgcagccaccacccgccccgctgtggcgagaccgcccac aagcctcctcgctccacacgcgcccacagcgccccggaggatatattccggagccgaggg acttctcgaggggacggaacggtgccctcaggatccattcggaaaggtgcagtaggccgt ggggatgtcttcgtggtggacgaggacaccgacttgttggatccaatcttccaaaatggc ggacaagtcaaccctcggtggaaaccttccggaaatggacttaagggaagccaaaaggaa aagactgaactgtcctctaaacagctggaggagaacattaccacagacaagaaggtggac tccggtgggaggacatcaccactgttccctggaaaaccctccggtgacattattgacctg gacaaagggaatgccaccaagaagcctgcagtgacatttcctgtccccaagatcccttca gatcctagaacatccacagactctgggacatctgcaaaggcagtagtcaagggggggaga cccatcaccactgttcaacaaccagacagagagcaccctgccattgtcaccattgtatcc agagatggagatctggtcctgggctccgatggcgcaatgtaccggcttcagagtggacca tcaggccgaatgggtcccccagggcaggaaggctgtcctggtgagcctggtctgcttggg ctgaaaggtgataagggtaagttgggccctgaagggcgtggaggaaaaacgggggagcca ggacccccaggaccggcaggtttaccatccctctacctgtggaagaacacggcggaggaa tgggctgcctttcagaaaaccaatttctaccagttactgcgcactggttggcctagtaaa gaaggccctgaaggaccacctggagagatgggcaggcctggcataaaggggccacctggt gacgctggggagcgaggacaaccaggaacgcctggagagatgggcgagcggggcctcagg ggccttccaggaaaagccggggcctcagggagagacggggtaaacggagacgacggtcag cccgggtcacctggtgctgctggatcacagggcccgtggggataccggggagaacgaggg tccaaaggggaaaagggtgacgagggtctcattggcctcaaaggtcccagaggggacatt ggggaacctggtgagaagggctctactggtttaccgggcccacctggtcctgtcgggcaa ccagggcctaaggggactcgaggtggctccgggccagaggggccctgtgggcctgatggg gagagtggactggacggccctccaggtccgccagggctgacgggcgcagcaggtttcaca ggacgagttggtgctcaaggagttaacggctcgaggggcgacatgggacctgctggcagc gttggtcccaaaggcccacaggggccctcaggtgtagagggacagatgggacatccagga ctccgagggacccagggacatctcgggctggtcggtgctgctggacctaaaggcgatcct gggcctgtggggcccgttggtgcccggggggatctcggctttgaggggcccatgggcgct gcagggaggcagggtcccatgggctttccaggcctcataggtaacaggggaccagatggg gacaagggggatcgaggacccggaggcgacaaaggcattcagggggcagcaggtattagg ggtcctcagggagagaggggccccaacggcttcccaggtttcacaggaaccaagggccag tctggccccaaaggcatcgagggaaacagaggaccagacgggcgtaacggcaagccagga ccccgagggaacaagggccggactggacagaggggccactccggtcaaccgggtccatcg ggtccctcgggtgcagccggcagcgcaggcagtaaaggaccatcgggcccaccggggaaa ccaggacctccaggatcaccaggactcctgggagacaagggtttcacagggaagccaggc atggagggacctcagggctcaggcatccaggggaccgtgggcatgcgtggacctccgggg ttcacaggagaaaggggtctgccaggtacttctggagataaaggacctcggggacctcag ggtcggtctggagatgaaggctccaaagggatacagggcccaccaggctctccaggtctc ccaggtgttgatggagcagttgggaaacctggacccaggggaagccaagggcccccagga cctcaaaggccacacgggcctgcaggaatcccaggcccacggggagctgatggcgtatta ggagcagcaggggaaagaggacacaagggtttacccggctcgctcggcgacgctggcccc ccaggccaagacggacaacagggtctcccaggccaaacaggaaacgaaggcccaactgga cggaaaggagaccagggggaccaagggtcttgtgggaagcttggccctcccggcctcaca ggagagcgaggactcgagggctcaaagggctcacaagggccaccaggtccagacggtaaa gagggtgatgtcgggcatcctggggaagttggagatcccggacccgaaggggagaagggc gagttgggacctcttggtttgtccggtcgagaaggcccctggggtgaccttggagaaaat ggccttaggggccaaaagggggacaagggccacattggactaatgggtgaaccggggctg atgggtgaaggggggccggcaggtctggccgggttacagggaatcacaggctctcgtgga cctctggggccagatggacctcaaggccagaagggggagtccgggtctgacggagtcacc ggacctccggggtcccaaggccctcaggggatgacgggtgctcgtggcgtcagaggagac acgggggggctcggtccaccgggctcaggaggacaagttggacctcagggagacacggga gcgaaaggggaagaggggccccagggactgaagggagagccaggagctccgagtccaccg ggggaacaggggcctcctggagagatgggaccccagggtcctccaggtcccacaggggct cctggagtgcaaggaagagcggggcctgaggggaaacagggcatgccaggggaaaaggga ggcgatggcaagaatggatcacaggggaagacgggtcatgttggaagaagggggaaacgg ggaagggccggagtcagagggagcagaggagaccgaggatctaagggccagaagggggac accggacaggctggccactcggggtggccggggctcatcggaatcgcaggcttacgggga gagacgggggatcaaggtgaaaaggcgaaagagggggagaaaggagacatgggactgccc gggccccctggaaatgatggcatggagggcattcgtggtatttttgggttgccaggtcca ccgggtctgataggagagcagggaaatattggtcccccaggaccaaggggaacaccgggg atgccaggactgcctggcttgtttggactcaagggtttgaaaggctaccagggtttctct ggcctgcccggcaggagggggctccctggcccgcctggggaacctggacctccaggacag tcactgaacatgacgttgacccagctcaaggacttgatgtacgtgtccgacaagcccaac tatcctctgctccaaactctgctggattctctgcagcaggagctccggctgctgctggat cctcctgatggcagcaaggagcatcctgccaccacatgcctggagctctggatctgtcac cccgaatacagcagcggaatgtattacatcgacccaaaccagggcagcacagcggacgct ctgctggcctactgcagcttctcctccacatcaaaacagacctgccttcatcctcgagac tctcaggtatga

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