Clinocottus analis (woolly sculpin): 137783965
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Entry
137783965 CDS
T10471
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04020
Calcium signaling pathway
cana04080
Neuroactive ligand-receptor interaction
cana04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
137783965 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
137783965 (grin1a)
04082 Neuroactive ligand signaling
137783965 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cana04040
]
137783965 (grin1a)
Ion channels [BR:
cana04040
]
Ligand-gated channels
Glutamate (ionotropic)
137783965 (grin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
137783965
NCBI-ProteinID:
XP_068430431
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MRLFLLAVLLWCSCARAGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQVYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFNWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLVQVGVYNGTQVVMSNQRKIIWPGGETEKPQGFQMSTRLKIVT
IHQEPFVYVKPTQLDGTCHEEMTLNGVLIKKVICTGPNETIPGNLSGRPIVPQCCYGFCI
DLLIKLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTIN
NERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLL
DRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFA
MIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELS
TMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGI
GMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLV
AGGIAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDTQEASGSQAVSGTPSL
PSSSLETQDDRKSGRAEPDPQKKASFRSISTTLASSIKRRRSSKDTQYPPTDITGQLNLS
DPSVSTVV
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttctgctggcggtgctcctctggtgctcgtgcgcgcgggccggctgcgag
ccgaaaatcgtgaacatcggggccgtgctgagccagaagagatacgagcaggtcttcaaa
gatgcggtgacccaggccaaccaggtctacggcagggacaaattcaagctgaccgccatc
tccgtaacgcacaaacccaacgccatccagatggctctctccgtctgcgaggacctcatc
tccagtcaggtctacgctatcctggtgagtcaccctccccagtccaatgaccacctcact
ccaacgcctgtctcctacactgcaggcttctaccgcatccccgtggtggggctcaccacc
cgcatgtccatctactcggacaagagcatccacctgtcctttctgcggacggtccctccc
tactcccaccaggcgcacgtgtggttcgacctgatgcgcgagttcaactggaaccacatc
atcttgatcgtgagcgacgaccacgaggggcgggccgctcagaagaggctcgagaccctc
ctggaggagagagaaacaaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctccagttcagccaagagactaac
ttaactgccctgctgctggaggcgaaagagctggaggcccgagtcatcatcctgtccgcc
agtgaggaggacgctgccgcagtgtacaaggctgcccgcttcctcaacatgacgggctcg
gggtacgtgtggctggtgggcgagcgagagatgtcgggtaaagccctgagcgaggcgcca
gacggtctgatcggcctccagctcatcaacgggaagaatgagtcagcccatatcaatgat
gcggtggcagtggtggctcagtccatccaggagctgtttgagaaggagaatatcacggaa
cccccgagaggatgtgtgggcaacaccaacatctggaaaacagggccgctctttaaacgg
gtgctgatgtcgtcgaaatacccagagggcctcacgggacgcgtggagttcaatgacgac
ggagacaggaagtacgcccattacagtatactcaactaccagaagagtcgactcgttcaa
gtcggcgtatacaatggaacgcaggtggtgatgagcaatcagcggaagatcatctggccc
gggggagagacagagaaaccacagggcttccagatgtccactcgattaaagatagtgacg
atacaccaggagccatttgtgtatgtgaaacccactcagctggacggaacatgccatgag
gaaatgactttaaacggagtcttaattaaaaaggttatctgcactgggcccaatgagacc
atcccaggtaacctatcaggacgtccaattgtaccccaatgttgttatggattctgtatt
gatctcctcatcaagttggctatgaccatgaacttcacctacgaggtgcatctggtggcc
gatgggaagttcggaactcaggagcgggtgaacaacagtaacaagaaagagtggaatggc
atgatgggagagctcctggggggcctggctgacatgatagttgccccactgactataaac
aacgagcgagcccagtacatcgagttctccaaaccctttaaatatcaaggcctcaccatc
cttgttaaaaaggaaatccctcgcagtacgctggactcgttcatgcaaccgttccaaagc
acgctgtggctgctggtgggtctttcggtgcatgtggtggcggtgatgctttacctacta
gaccggttcagcccgtttggaagatttaaagtaaacagtgaagaggaagaagaagatgcc
ctcaccttatcatctgctatgtggttctcctggggagtgttgctgaattctggtatagga
gaaggtgcgccacgcagcttctcagcgagaatcctgggtatggtgtgggccggatttgcc
atgataattgtggcttcatatactgccaacctggctgccttcctggtgttggaccggcct
gaggagcgcatcaccggcatcaatgacccaaggctgagaaacccatccgacaagttcatc
tacgccacggtgaagcagagctccgtggacatctacttccggcggcaggtggagcttagc
accatgtaccgccacatggagaagcacaactatgagagtgccgccgaggctatccaggcc
gtgcgtgacaacaagctgcatgctttcatctgggactctgcggtgctggagtttgaagcc
tcgcagaagtgcgacctggtgaccacgggagagctgtttttccgctcgggctttggcatt
ggcatgcgcaaggacagcccctggaaacagaatgtgtccctggccattctcagttctcat
gagaatggcttcatggaagacctagataaaacctgggtgagataccaggagtgtgactca
aggagcaatgccccagccacactcacctttgaaaacatggcaggggtcttcatgctggtg
gcaggaggaatagccgcagggatcttcctaatcttcattgaaatcgcctataagcggcat
aaagacgcccgcaggaagcagatgcagctcgcctttgcggcggtcaatgtttggaggaag
aacctgcaggacactcaggaggcctctggaagtcaagctgtgtctgggaccccctcgtta
ccctcttcctctctagagactcaggatgataggaaaagtggtagagcagagcccgacccc
caaaagaaagcctcttttaggtccatcagtaccaccttggcctccagcatcaagagacgt
aggtcctccaaagacacgcagtacccacccactgacatcacgggccaactcaacttgtct
gacccgtctgtcagtaccgtggtgtaa
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