Clinocottus analis (woolly sculpin): 137784003
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Entry
137784003 CDS
T10471
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137784003 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137784003 (exosc2)
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
137784003 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
137784003 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
137784003
NCBI-ProteinID:
XP_068430503
LinkDB
All DBs
Position
Unknown
AA seq
293 aa
AA seq
DB search
MAADMRLPTIQKAVSLSVSAFDRKDLVVPGDVITSDTGFMRGHGTYVDDDKLTASVAGEV
QRVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGEL
RRRSAEDELTMREYLQEGDLISAEVQSVFSDGALSMHTRSLKYGKLGQGVLVQLSPSLIK
RQKTHFHNLPCGASMILGNNGFVWLYPTPEQQEEEAGGFYTSLEPVSLPDREVISRLRNC
LLALSAHKVLLYDTSVLYCYESSVQHQVKDILKPEVMEEIVMLTQQKLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgacatgagattaccaactattcaaaaagcagtgtcgttgtccgtttctgct
ttcgaccgaaaagatctggtcgtccccggcgatgttatcacttcagacaccggcttcatg
aggggtcatggcacctatgttgatgatgacaagctgacagcttcagttgcgggagaggtg
cagagagtagacaagctgatctgtgtcagaccacttaaaaccaggttcaacggtgaggtt
ggagatgtggtggttggcagaatcacagaggtacaacagaaaaggtggaaggtggagacc
aactcccggctggactcggttctcttgttgtcctctgttaatctgcctggaggagagctg
aggagacgatcagcagaagatgagctcaccatgagagaataccttcaggagggcgatctc
atcagtgcagaggtgcagtctgtcttctcagatggagccctatccatgcacacccgtagt
ttaaaatatggaaaattgggtcaaggagtgctggtacagctgtctccttctctgatcaag
aggcagaaaacccatttccataacctgccttgtggtgcatccatgatcctcgggaataac
gggtttgtgtggttgtatcccacacctgaacaacaggaggaggaggctgggggcttttat
accagcctggagcctgttagtctgccagatcgagaggtgatttcacggctaagaaactgc
ctactggctttgtctgcacacaaggttcttttgtatgacaccagtgttctctattgctat
gaatcttcagttcagcatcaggttaaggacatcttgaaaccagaagtaatggaggagatc
gtaatgttgacacaacagaagctgttggaacaggaaggttaa
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