Clinocottus analis (woolly sculpin): 137784028
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Entry
137784028 CDS
T10471
Symbol
pus1
Name
(RefSeq) pseudouridylate synthase 1 homolog
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cana03016
]
137784028 (pus1)
Enzymes [BR:
cana01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
137784028 (pus1)
Transfer RNA biogenesis [BR:
cana03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
137784028 (pus1)
Prokaryotic type
137784028 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
WC-rich
DUF2344
Motif
Other DBs
NCBI-GeneID:
137784028
NCBI-ProteinID:
XP_068430540
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MFKIRPLFSASVNRLTLGKNGGPHKVLSTMSDESRDEQTAKLLKRANEENEDSAEKEEVQ
ATKKLKAEGEHADDEKKYPKKKVALLVAYSGKGYYGMQRNPGTSQFRTIEDELVTALIKS
GCIPENHGDEMKKMSFQRCARTDKGVSAAGQVVSLKLRLIDNTMEKINEHLPSQIKVLGL
KRVTQGFNSKNNCDARTYAYMLPTVAFSPKDYDTDAIAAFRLEPETLQKVNSLFALYKGT
RNFHNFTSQKAPSDPSARRYITEMSCGEPFISGNIQFAVITVRGQSFMLHQIRKMIGLVI
AVTRGYAKEEVVERSWGQDKVDVPKAPGLGLVLERVHFDRYNKRFGGDGLHERLDWEHEE
EAIKAFKEAHIYPTIVETECQEGSMVSWMSSLPIHDFKATATAADTQNNKDQKQDTADLG
NDSD
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaatccgaccgctattcagtgcctcagttaacagacttactttaggaaaaaac
ggtggccctcataaggtgttaagcacgatgagtgacgaatccagagacgagcagacagcc
aagctgctgaaaagagccaatgaggaaaatgaggactcggctgagaaggaggaagtgcag
gctacaaaaaagttaaaagcagaaggggaacatgctgacgatgaaaagaaatatcccaaa
aagaaagtggccctcctcgtggcatactctggaaagggatactatggcatgcagagaaat
cccggaacctctcagtttaggaccatcgaagatgagctggtcactgcactcattaaatca
ggttgcattcctgaaaaccatggtgatgagatgaagaagatgtctttccaaagatgtgcc
agaacagataagggtgtgtctgctgctggccaggtggtgtctctaaagctgcggttgatt
gacaacaccatggaaaaaatcaatgagcatctgccatcacagatcaaagtgcttggactt
aaacgggtgactcaaggtttcaattccaaaaacaactgtgacgctcgtacatacgcatat
atgcttccaacagtggccttttccccaaaagactatgacactgacgccatagcagccttc
cgcctcgagccagagacacttcagaaggtgaactctctgtttgctctctacaaaggcacc
cgtaacttccacaacttcacttcccagaaggctccaagtgaccccagtgcccgccgctat
atcacagagatgtcttgtggagagcctttcatcagcggcaatatacagttcgctgtgatc
accgtgcgaggccagagcttcatgctgcaccaaatccggaagatgatcggcctggtcatt
gctgtgacgaggggctacgcgaaggaggaagtggtggaacgcagctgggggcaagataag
gtggacgttcccaaagctccagggctgggcttggtcctggaaagggtgcactttgaccgg
tacaacaagcgattcggaggggacggactgcacgagcggctggattgggaacatgaggag
gaggccatcaaggccttcaaagaggctcacatctaccccaccattgttgagacggagtgt
caggagggctccatggtcagctggatgtcctcacttcctatccatgactttaaagctaca
gccacagctgctgacacgcaaaacaataaggaccagaaacaggacactgcagatttagga
aatgactcagattag
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