Clinocottus analis (woolly sculpin): 137784214 Help Entry 137784214         CDS       T10471                                  Symbol col5a1 Name (RefSeq) collagen alpha-1(V) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism cana  Clinocottus analis (woolly sculpin) Pathway cana04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cana00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     137784214 (col5a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cana00536]     137784214 (col5a1) Glycosaminoglycan binding proteins [BR:cana00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    137784214 (col5a1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1 Motif Other DBs NCBI-GeneID:  137784214 NCBI-ProteinID:  XP_068430819 LinkDB All DBs Position Unknown AA seq 2010 aa AA seqDB search MDTHIRWKVKRRIRDAQITLAVILLFVTSQASSAEPADLLKVLDFPSLPEGVRKSTGFCS HRRSTNGPDVAYRVSKDAQLSAPTRQLYPGDVFPEDFSILATVKPKKGSQSFLLSVYNEQ GIQQLGLEVGRSPVFLYEDHTGRPSPEDYPLFRGVNLADGKWHRVAISVHQQTITLILDC KKKATQKLLRSPHPIIDTKGIVVFGTRILDEEVFEGDIQQLMIVADHRAAYDYCEHYSPD CEVPVPDQPQNQDPNTDEYNTEEDSYYYEYPYYEDGDGKPLDATSDAETTEVKVTEADDA ATKVEEVLRGSTATAGKVLTSSSSSSSSSSSSSTGASDATANGGDAYGDGEETSPYESYD GYGNYEGYDDATAAPEVDAGSRRVTLTGTGVELDLGGAGGRVDLGTGAGIDTKFITGDGG AAITTVISNKTAGVSSYDDYNGEYDYDVDGKYTSGGGGGGAGSSSTIHLGGGGGGGDSSS SSTVHLGGGGSSSTIHLGGGGGGGGGGGGGSSSSSTITIGDGSISAGGSSTTGGGAASAG AGGSVATGKDLGVEVEGDYADLEDGFKEDLVTDYGDIDVYDGDYGDYGDKEGKILPAVTD DQYYSQIDGARGEKGQKGEPAVIEPGMLVEGPSGPEGPTGLPGPPGPSGPPGSPGDSGER GLPGRSGLPGADGLPGSPGTVLMLPFRFSSGGDSGQKGPAMSAQESQMQAIMQQARLAMR GPSGPMGLTGRSGPLGSPGVPGLKGESGEGGPQGPRGPLGGMGPSGKPGRRGRSGSDGAR GMPGQSGPKGDRGFDGLAGLPGEKGHRGESGPSGPPGGPGEDGERGDDGEIGPRGLPGES GPRGLLGPKGPQGPPGPPGVTGMDGHPGPKGNIGPQGEPGPPGQQGNPGTQGLAGPQGAI GPPGDKGPTGKPGLPGMPGADGPPGHPGKEGPNGEKGHMGPAGPQGPIGYPGPRGVKGAD GVRGLKGHKGEKGEDGFPGFKGDMGLKGDRGELGPAGPRGEDGPEGPKGRSGLPGDAGPL GTSGEKGKLGVPGLPGYPGRQGPKGSQGFQGFPGANGEKGTRGLAGKSGPRGQRGPTGPR GERGPRGPTGKAGPKGNSGNDGPPGPLGERGLPGPQGPTGFPGPKGPPGPSGKDGLPGHP GQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGDRGHPGPPGPPGEQGLPGAAGKEGAK GDFGPAGPAGKDGPPGPRGFPGERGLPGPVGAHGLKGNEGPHGPPGPAGSPGERGPAGSA GPTGLPGRSGPQGPPGPSGEKGGPGEKGPQGPAGRDGIQGPVGLPGPGGPPGPPGEDGDK GELGEPGQKGGKGDKGEHGPPGPTGPQGPVGAPGPAGADGEPGPRGQQGLFGQKGDEGSR GFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGPPGADGPQGPSGGIGNP GSVGEKGDAGETGEPGLQGELGPPGPRGERGEKGESGPAGTAGPPGPKGPPGDDGPKGSP GPSGFPGDLGPPGEPGPAGLDGPAGDKGDDGEAGQAGSPGPTGESGPSGPPGKRGPPGVS GPEGRQGEKGGKGESGMEGPQGKTGPVGPQGSPGKPGSEGLRGIPGPVGEQGLPGSPGPD GPPGPMGPPGLPGLKGDSGIKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPPGSHGSKGDN GISGPSGPLGPLGPPGLPGPAGPKGAKGSSGQTGPKGETGTSGPPGPPGPPGDVIHPLPI MTSMKGRTRRNIDASQMSDDAAAGGAGGADANYKDYDDGMEEIFGSLNSLKLEIEQMKHP LGTQNNPARTCKDLQLCHPDFPDGDYWIDPNQGCSRDSFKVYCNFTAGGESCIFPDKKSE GARLTSWAKENPGSWFSEFKRGKLLSYVDAESNPISVVQMTFMRLLSASARQNMTYNCYQ SVAWHDQDPDNYDKAIRFLGSNDEEMSYDNNPYIRAVVDGCALKKGYEKTVLEINTPKVE QVPFVDIMFNDFGGSTQKFGFEVGPVCFIG NT seq 6033 nt NT seq  +upstreamnt  +downstreamnt atggatacccatataagatggaaagttaaacggaggataagggacgcccaaatcacgttg gcggtgatcctgctttttgtcacttcgcaagcgagttcagcggaaccagcagacctcttg aaggttttagattttcccagtttacctgagggcgttagaaaatccacgggtttctgctca catcggaggtcaacaaacggacccgatgtggcctacagagtatccaaagacgcccagctc agcgcccccaccagacagctgtatccaggcgacgtgttcccggaggacttctccatcttg gccacggtgaagccgaagaagggcagccagtccttcctgctgtccgtgtacaacgagcag ggcatccagcagctcggcctggaggtgggccgctcgcccgtgttcctgtacgaggaccac acgggcagacccagccccgaggactacccgctcttcagaggagtcaacctggcggacgga aagtggcaccgagtggccatcagcgtgcaccagcagaccatcaccctcatcctggactgt aaaaagaaggccacccagaagctgctccgaagccctcaccccatcatcgacaccaaggga atcgtagtgtttggaaccagaatacttgacgaagaagtcttcgagggagacatccagcag ctgatgatcgtagccgaccaccgcgccgcctacgactactgcgagcactacagccccgac tgcgaggtgccggtgcccgaccagccccagaaccaggaccccaacacggacgaatacaac acagaggaggacagctactactatgagtacccgtactacgaggacggggacggcaagcct ttggacgccacgtccgacgccgagacaacagaagtcaaggtgacggaggctgacgacgcg gcaaccaaagtggaggaggtcctgcggggctccaccgccaccgccggcaaagtgttgacc agctcctcctcctcctcctcctcttcttcctccagcagcaccggcgcctcggacgccacc gccaacggcggggacgcctacggagacggagaggagaccagcccctacgagagctacgac ggctacgggaactacgaaggctacgacgatgccacggcggcgcccgaggtggacgccggc tcccgacgggtcacgctcaccggcaccggcgtcgagctggatctgggcggcgcgggcgga agggtcgacttgggcacgggggccgggatcgatacaaagttcatcaccggcgacggagga gccgcgatcacgaccgtcatcagcaacaagacggcgggagtgagttcctacgatgactac aacggggaatacgactatgacgtggacggcaaatacaccagcggaggcggaggcggcggc gccggcagcagcagtacaatccaccttggaggcggcggaggcggcggcgacagcagcagc agcagtacagtccaccttggaggcggcggcagcagcagcacaatccaccttggaggcgga ggcggaggcggcggcggcggcggcggcggcagcagcagcagctctaccatcaccatcgga gacggctccatctctgcgggaggatcgtccaccaccggagggggagcggccagcgccgga gcgggcggctccgtcgccaccggaaaggacctgggcgtggaagtcgagggcgactacgcg gacctggaggacgggttcaaagaggacctggtcaccgactacggcgacatcgacgtctac gacggggactacggcgactacggcgacaaagagggcaaaatcctgcccgctgtgaccgac gatcagtattactcacagatcgacggtgcccgcggagagaagggacagaagggagagccg gctgttattgagcctgggatgctggtggagggtccgtctgggcctgaagggccaacaggt ctccccggacccccaggtccttctggcccaccaggcagtcctggagattctggagagagg ggtcttccgggtcgttccggtcttcctggtgccgacggtttgccaggaagtcctggaact gtgctgatgctgcctttcagattcagctccggaggcgactccggtcagaagggacccgcc atgtcggcgcaggagtcccagatgcaggccatcatgcagcaggccaggctggctatgcgc ggcccttcaggtccaatgggtttgactggcaggtccggccctctgggttctcccggagtt ccaggactgaagggagagtctggagagggaggccctcagggaccgcgtggacctttgggt ggcatgggaccctctggaaagcccggcagaaggggtcgttctggatccgacggcgcccgc ggcatgcccggacagtctggacccaagggagaccgagggttcgatggcctggccggactt cccggtgaaaagggacacagaggtgaatctggaccttctggaccacccggtggccccgga gaggacggagaaaggggagatgatggagagatcgggccccggggacttcctggtgaatca ggtccccgtggtttgctgggaccgaaaggacctcagggacccccaggaccccccggcgtg actggaatggatggccaccccggacccaaaggaaacataggaccacaaggagagccggga cctcccggccagcagggcaacccaggaacccagggacttgcggggccccaaggagccatc gggcctccaggagacaagggtcctacagggaaaccaggcttgccaggaatgccaggagct gatggtcctccgggtcaccccggaaaggaggggcctaatggagagaaaggacacatgggc cctgctggccctcaaggacccattggttatccggggccccgaggcgtgaagggagcggac ggtgtgcgcggactgaaaggacacaagggtgaaaagggagaagatggattccccggcttc aagggagacatgggcctcaagggcgaccggggagagctcggcccagcaggacctagagga gaggacggtcccgagggcccgaagggtcgttcgggtctcccaggagacgccggtcccttg ggaaccagcggcgagaagggtaaactcggagtccccggattgcccggatacccaggaaga caaggaccgaagggatctcaaggtttccaaggttttccaggcgccaatggcgagaaggga actcggggattagcaggaaagtctggcccacgcggacagagaggacccacgggccctcga ggagagaggggaccgagaggaccgacggggaaagccggaccaaagggtaactcaggaaac gacggcccaccgggaccgctcggcgagaggggtctgccaggccctcagggaccgacgggt ttcccaggaccaaagggacctcctggaccttcggggaaagacggactgcccggacatccc ggacagagaggagagactggattccaaggcaagactggtcctcccggcccgcccggcgtg gtcggacctcagggaccgacaggtgaaactggaccgatgggagaccgaggtcacccggga cccccgggcccacctggtgagcaaggtctaccgggcgctgcaggaaaagaaggagccaag ggtgactttggtcctgccggcccggcgggtaaggacggccccccgggtcccagagggttc ccgggagagcgaggtctgcctggccctgtgggggctcacggcttgaaagggaacgaagga cctcacggaccacctggccccgctggttctccaggtgagcgcggtcctgccggctcagcc ggacccacgggtctccccggacgttctggaccccagggacctccgggcccctccggagag aaaggtggaccgggagagaaaggacctcaaggcccagctggaagagacggtattcaggga cctgtaggtctgcccggacccggaggacctcctggaccgcctggggaggacggagacaag ggagagctcggagagccgggccaaaaaggaggcaagggagacaaaggagagcacggtcca cctggtcccaccggcccccaagggcccgtcggagcacccggtcctgctggtgcagatgga gagcccggtcccagaggtcagcagggtctgttcggccagaagggagacgaggggtcgcga gggtttcccggacccccgggtccagtcgggctgcagggcctgccaggtccacccggagag aaaggtgaaactggagacgttggtcaaatgggtccacccggcccccctggtccgagaggc ccctccggacccccaggagccgacggtcctcagggcccatcgggcggtattggaaacccc ggttctgtcggagaaaagggagatgctggtgaaaccggagagccaggtcttcagggagaa ctcggcccacctggtcctagaggcgagcgaggagaaaagggagagtccggtccggccggc acagcgggacctccgggccccaagggcccccctggagacgacggtcccaaaggcagcccg ggtccaagtggtttccccggtgacctgggaccccccggagagcctggtccagccgggtta gacggtcccgctggtgacaagggagacgacggagaggccggtcaagccggttctcctgga cccaccggagagtcaggtccctctggaccaccaggaaaaagagggccccctggagtctca gggcccgagggaagacaaggagagaagggaggcaagggagagtctggcatggaaggcccc caaggaaagacgggtcccgtcggacctcaagggtcacccggcaagcccggttctgaaggc ctcaggggcatcccgggcccagttggggagcaaggccttcccggttctccgggcccggac ggacctcccggtcccatgggtcctcccggcttacccggcttgaaaggagactctggtatc aagggagaaaagggccacccgggtctcatcggtctcatcggacctccgggcgaacaggga gagaagggcgacaggggtctccccggcccgccgggatcgcacggatccaaaggagacaac ggtatttcaggtccctcgggtccgctcggccccctcggccctccaggattacctggtccc gccggtcccaaaggagctaaagggtcgtcgggtcaaaccggaccaaagggagagaccggt acatctgggcctcccggccctcctggccctcccggcgacgtcatccacccgctccccata atgacctccatgaagggccgaactcgcaggaacatcgacgccagccagatgtcggacgac gccgccgccggtggcgccggcggcgcggacgcaaactacaaggactacgacgacggcatg gaggagatcttcggctcgctcaactccctgaagctggagatcgagcagatgaagcacccg ctgggcacgcagaacaaccccgcgcgcacctgcaaggacctgcagctctgccaccccgac ttccccgatggtgactactggattgatcccaaccagggctgctctcgggactccttcaag gtttactgcaacttcacagcgggcggcgagagctgcatcttccccgataagaagtctgaa ggggctaggctcacatcctgggccaaggagaatcccggctcatggttcagtgaattcaaa cgtggtaaactgctctcctacgtggacgcggagagcaaccccatcagcgtggtccagatg accttcatgcggctgctgagcgcgtcggcccgacagaacatgacgtacaactgctaccag tcggtggcgtggcacgaccaggaccccgacaactacgacaaggccatccgcttcctgggc tccaacgacgaggagatgtcttacgacaacaacccctacatccgcgccgtggtcgacggc tgcgcgttgaaaaagggttatgaaaagacggtgctggagatcaacacgccgaaagtggag caggtgccgtttgtggacatcatgttcaacgatttcggcggctccacgcagaagtttgga tttgaagtgggccccgtctgtttcatcggctga

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