Clinocottus analis (woolly sculpin): 137784247
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Entry
137784247 CDS
T10471
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cana03036
]
137784247 (sbno1)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
137784247 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
PLAC9
Motif
Other DBs
NCBI-GeneID:
137784247
NCBI-ProteinID:
XP_068430870
LinkDB
All DBs
Position
Unknown
AA seq
1405 aa
AA seq
DB search
MDPGQDLLLAALSESGICPNDMGIFDVDSQDAAQPSTTQQSISISALDVGVGTESVEIAR
TGPPAPVPIVTIRHKPQPSTTTFVLNQLNQLPSLGANVTKQSVTNPVKHTITVTKVVHVN
NSALRGCSSPSTMTFPSSASTVVPSNKDQQIQLKDLLRSGNVKGTGLKGNSLMELMRLKP
PPNIAPPVASATATGEMNNGIKKEVFSKDPARVWINDDIKMQTFPHSLKIPGMKEEDEPE
EEEEDELGHAETYAEYMPMKLKIGQRHPDPVVETSSLSSVSPPEVWYRLSISEEVIDRGC
LSALQLEAITYAAQQHETFLPSGDRAAYLIGDGAGVGKGRTIAGIIYENYLLGRKRSLWF
SVSNDLKYDSERDLRDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQ
SGGKYKTRFQQLLHWCGEDFDGVIVYDECHKAKNVCPIGSSKPTKTGLAVLELQNKLPKA
RVVYASATGASEPRNMAYMNRLGIWGHKTPFREFGNFIQAVERRGVGAMEIVAMDMKLRG
MYIARQLSFTGVTFKIEEVPLTQQYINMYNKSVRLWVSAREKFQQAANLMDAEQRMKKSM
WGQFWSAHQRFFKYLCIASKVRRVVQLAREEVQNGKCVVIGLQSTGEARTLEALEEGGGE
LSDFVSTAKGVLQSLVEKHFPAPDRQKLYSLLGIDLSAKKTPSPTETAVPLEQKGKKRKG
PEVKKQQQKKKKKPRKHGGLSGTSSEESQSEESDEESGKDSDDSFKSISSGEEDDDFNPF
RDESDDGEDDPWLIRKEPKKGKEKKKKKKKKSIDPDSIQSALLASGLGSTRPAFTATVIA
PSAPAIVKAEIQDSCLTSQDAVEHAQKMKKDLLEKLEDLAEDLPPNTLDELIDELGGPEN
VAEMTGRKGRVVSNDDGSITYESRSELDVPVEILNLTEKQRFMDGEKNIAIISEAASSGI
SLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFA
SIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVKLDSPLVPPPAH
FKGDFFKEIQRGLIGVGLINLEDRSGTMNLDKDYNNMGKFLNRILGMEVQQQNALFQYFS
DTLAAVIQEAKKSGRYDMGILDLGSGDEKVKKVDCRKFLTPGYTTSGHVELYTVSVERGM
SWEEATHAWADQNGEDDGFYVQMRNNKKTAILVKEVNAKKRLFLVYRPNTGRQVKLETYI
DIKKKFKKVLSDDAKQHWIDQYKSSANICSHAYWRGNCKKASVGLQCEVGLRCRTYYVLC
GSVLSVWNELEEVLTPVSGTNVKVQIVRLRTEDGQRIVGLIIPANCVSPLSNKLSTSDQS
QQLAVQELQKQQQLHPQSLCHAPNT
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggacaggatttacttctcgctgccctgagtgagagtggtatttgtccaaat
gatatgggcatatttgatgttgattctcaggatgctgcacagccctctacaacccagcaa
tctatttccatcagtgccctggatgttggtgtggggacagagtcagtggaaattgctcga
actgggcctccagctccagtccctatagttactatcaggcacaaacctcagccatcaacc
accacgtttgtcttaaatcagctaaatcagttgccgtcactaggagctaatgtgaccaaa
caatcagttacaaatcctgtcaaacataccataactgtcaccaaagtggtccatgtcaat
aattcagccctgcgaggatgttcgagtccctccaccatgacttttccttcgtcagcgtcc
acagtagtgccttctaacaaagatcagcagattcagttgaaagacctccttcggtccggc
aatgtgaagggcaccggtctaaagggcaacagcctgatggagctcatgaggctaaagcct
ccacctaacattgctccaccagtggcatcagctaccgccacaggtgaaatgaacaatggg
atcaagaaggaagtgtttagtaaagatcctgccagggtctggatcaatgacgacatcaaa
atgcaaaccttcccgcattctctgaaaattccagggatgaaggaggaagatgaacccgag
gaggaagaggaagacgaattgggccatgcagagacttatgcagagtacatgccaatgaaa
ttgaagatcggccagcggcatcccgatcctgtggtggagaccagctccctgtccagtgtc
agccctccagaagtgtggtacagactgtccatctcggaggaagtcattgatcgtggctgc
ctgtcggctctgcagctggaggcgataacgtatgccgctcagcaacatgagacattcctc
cccagcggtgatcgagctgcttatttaattggagatggagccggtgtggggaaaggccgg
accattgcagggatcatttacgagaattaccttttaggcaggaagagatctctttggttt
agtgtctcgaatgacttgaagtacgactccgaaagggatttaagggacataggagccaaa
aacatccaggttcattcactaaacaagttcaaatatgggaaaatctcctcgaaacacaat
gggagtgtgaagaaaggtgtgatattcgccacctactcttcattgattggagagagccaa
tcaggtgggaagtacaagaccagattccagcagctcctccactggtgtggggaggacttt
gacggagttatcgtctatgacgagtgtcacaaagccaaaaacgtgtgtccaattggatcg
tccaaacctacaaaaaccggactcgccgtgttggagctgcagaacaaactccccaaggct
cgggttgtgtatgcaagtgcgacaggtgcctctgagccgcgaaatatggcctacatgaat
cgcctgggtatctgggggcataaaacacccttcagagaatttggcaactttatccaggct
gttgagcgcagaggtgttggcgccatggagatagtagccatggatatgaaattgaggggg
atgtatattgccaggcaattgagttttacaggtgtgacttttaagattgaggaagttccc
ctgactcagcaatacatcaacatgtacaacaaatctgtgaggctgtgggtgagcgcgcgt
gagaagttccagcaggcagcgaacctgatggacgccgagcagcgcatgaagaagtccatg
tggggccagttctggtccgctcaccagaggttcttcaaatacctctgcatcgcctccaaa
gtccgccgagtggtgcagctggccagagaagaggtccaaaatggaaagtgtgtggtcatc
ggtctccagtccactggagaagcaagaacactggaggccttggaggaaggaggaggagag
ctcagcgacttcgtttcaactgcaaaaggtgtgctgcagtccctggtcgagaagcacttt
ccagctcctgacagacaaaagctttacagcctgctcggcatcgacctctcggcgaagaag
accccgtctcccactgaaacagcagtaccgttagaacagaagggcaagaaaaggaaaggt
ccagaggtaaaaaagcagcagcagaagaagaagaagaagccgcgcaagcatggcggcctg
tcgggtaccagctcggaggagagccagtcggaggagtcggacgaagagtccggcaaagac
agcgacgacagcttcaagtccatcagctcaggcgaagaagacgacgacttcaaccccttc
agagacgagtctgacgacggggaagacgatccgtggctcattagaaaggaaccaaagaaa
gggaaagaaaagaagaagaaaaagaaaaagaagagtattgatccagactccattcaaagt
gccttgttggcctctggtctgggctccaccaggcctgctttcactgccactgttatcgct
cccagcgcccccgccatagtcaaggcagagattcaggatagctgcctaacgagtcaggac
gcagtggaacatgctcagaaaatgaagaaagatctgctggaaaaacttgaggacctagct
gaggatctacctcccaacactctggacgagctgatagacgagctgggaggacctgagaac
gtagccgagatgaccggtcgcaaaggtcgcgtggtcagcaatgacgatggcagcatcacg
tacgagtctcgctccgagctggacgtcccggtggaaatcctcaatctcacagagaagcag
aggttcatggatggagagaagaacatagccatcatctcggaagctgccagctcgggtatt
tcccttcaggccgaccggcgggtgaagaaccagcggcggagagtccacatgacactggag
ctgccgtggagcgccgacagagcgatacagcagttcgggagaactcacaggtcaaaccag
gtcacggctccagaatacgtcttcctcatatcagagctcgcaggagagcagcggtttgca
tccattgttgccaaaagactagaaagtctgggagctctcacgcatggagacagaagagct
acagaaactcgagatctcagcaggtttaattttgacaacaaatacggaagaaatgctctg
gaaattgtgatgaagtcaatcgtgaagctcgattctccgctagtgcctccgcccgctcac
tttaaaggagatttcttcaaagaaattcaaagaggattaattggtgtgggcctcataaac
ctggaggacagatctggcacaatgaacctggacaaagactacaacaacatggggaagttc
ctgaaccgtattttggggatggaggtccagcagcaaaatgccttgttccagtacttctcc
gacactttggcagctgtcatccaggaagccaagaagagcggcagatatgacatgggcatt
ctggatctgggctccggtgatgagaaggtgaagaaggtagactgcaggaaatttctaaca
ccgggctacacaacttcaggacatgtagaactctacacggtgagtgtggagagggggatg
tcgtgggaggaagccacgcatgcttgggcagatcagaacggagaagatgatggtttctat
gttcagatgaggaacaacaagaaaacagccatactggtcaaagaggtgaacgctaagaag
aggctcttcctggtttacaggccgaacaccggcagacaagtcaaactggagacgtacata
gacatcaagaagaagttcaaaaaggttttgtctgacgacgccaagcagcactggattgac
cagtacaagtcatctgcaaatatctgctctcatgcttattggaggggaaactgcaagaaa
gcgtcggtgggcctccagtgtgaagtcggtctccggtgtcggacatactacgttctgtgc
ggctcagtgctcagcgtgtggaacgagctggaggaggttctcacgccggtcagtggaacc
aacgtaaaggtgcagatcgtccgactcagaacagaagacggacagagaatagtcggacta
atcattccagcaaactgcgtgtctccgttaagtaacaagctgtcgacgtcggaccagagc
cagcagctcgccgtgcaggagcttcagaagcagcagcagctccacccccaaagtctctgt
catgcccccaacacatag
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