Clinocottus analis (woolly sculpin): 137784402
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Entry
137784402 CDS
T10471
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03082
ATP-dependent chromatin remodeling
cana03083
Polycomb repressive complex
cana04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137784402 (rbbp4)
03083 Polycomb repressive complex
137784402 (rbbp4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
137784402 (rbbp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cana03036
]
137784402 (rbbp4)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
137784402 (rbbp4)
Histone modification proteins
HAT complexes
HATB complex
137784402 (rbbp4)
HDAC complexes
Sin3A-HDAC complex
137784402 (rbbp4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
137784402 (rbbp4)
PRC2.2
137784402 (rbbp4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
137784402 (rbbp4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
137784402 (rbbp4)
Chromatin remodeling factors
NuRD complex
137784402 (rbbp4)
NuRF complex
137784402 (rbbp4)
NuRF complex (fruit fly)
137784402 (rbbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
WD40_RFWD3
eIF2A
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
137784402
NCBI-ProteinID:
XP_068431108
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MSAMADKEAGILSSVGAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWL
PDVSRPEGKDYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFEASHYDSEKGEFGGFGS
VSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSEVLVFDYTKHPSKPVDASGECHP
DLRLRGHQKEGYGLSWNPNLSGSLLSASDDHTICLWDISAVPKEGKIVEAKTIFTGHTAV
VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFIL
ASGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK
IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMTKRGS
EQASLNLQLKTAKKEISVEIDLMYHLQRFSQGRVRKTDRVNG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaatggcggacaaggaagccggcatcctctcttcagtaggggcatttgacgat
gcggtcgaggagagggtgataaacgaggagtacaagatctggaagaaaaacactcccttc
ctgtacgacttggttatgacccacgctttggagtggccaagcctcactgctcagtggctg
cccgacgtctccaggccagagggaaaggactatagtgtgcaccgactggtgttgggcacc
cacacgtccgatgagcagaatcacctggtcattgctagcgttcagctgcccaacgatgac
gcccagtttgaagcctcacactatgacagcgaaaaaggagagtttggaggcttcggctca
gtgagtggcaagatcgagatagaaatcaagatcaaccatgaaggagaggtgaaccgtgct
cgctacatgccccagaacccctgcatcatcgccaccaagacccccacctcagaagtgctg
gtgtttgactacaccaagcacccctcaaagccagttgacgcttcgggagagtgtcaccct
gacctgcgtctcagaggccatcagaaagaaggctatggtctctcctggaatccaaatctg
tctggctctctcctcagtgcgtcagatgaccatacaatctgtctgtgggacataagtgct
gtgccaaaggaggggaagatcgtagaggcaaagacgatcttcactggtcacaccgctgtg
gtggaagacgtctcctggcacctgcttcacgagtcgctctttggatccgtagccgatgac
cagaagcttatgatttgggacactcgttcaaacaacacctccaaacccagccacgcagtc
gacgcccacacggcagaggtcaactgtttgtcattcaacccgtacagcgagttcatcctt
gcatccggctctgcggacaagactgtggctctttgggacttaagaaacttgaaactgaag
ctgcattccttcgagtcgcacaaggatgagatcttccaggttcagtggtcacctcataat
gagaccatactggcatccagtggaacagaccgccgcctcaacgtctgggacctcagtaaa
atcggggaggagcagtcaccagaagatgcggaggacggcccccccgagcttctgtttatc
cacggaggccacactgctaagatctctgacttctcctggaatcccaacgagccctgggtc
atctgctcggtgtctgaagacaacattatgcaagtctggcagatgactaaacgtggatca
gagcaggcgtccctgaatttgcagctaaagactgcaaaaaaggaaatctcagtcgagatc
gatttgatgtatcatttgcagcgattcagtcagggcagagtgaggaagacagacagggtg
aatggctga
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integrated database retrieval system
