Clinocottus analis (woolly sculpin): 137784482
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Entry
137784482 CDS
T10471
Symbol
arid1ab
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137784482 (arid1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cana03000
]
137784482 (arid1ab)
03021 Transcription machinery [BR:
cana03021
]
137784482 (arid1ab)
03036 Chromosome and associated proteins [BR:
cana03036
]
137784482 (arid1ab)
Transcription factors [BR:
cana03000
]
Eukaryotic type
Helix-turn-helix
ARID
137784482 (arid1ab)
Transcription machinery [BR:
cana03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137784482 (arid1ab)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137784482 (arid1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
137784482
NCBI-ProteinID:
XP_068431290
LinkDB
All DBs
Position
Unknown
AA seq
2340 aa
AA seq
DB search
MAAQVASVATLNTSPPSELKKPDRDPQEESVPGEKQHENKDPGPDGGSPGQKELQDGTDA
SNAGGGGDPDMKNGNGNLPRVNNNSSNQNDSGGPEGNNHPGMGHHHPGPFPPPPYGYNQH
YSRAPFHQHGGQQSPGMAAASGPGMMDPYPPNSHEHGYPNHYNNYSPFQNRTSYQGQGYG
AMNSPRNNQPPAAGGQPGKQQPAGGTTAMAASYNNQRYNMGTQQPTSTPTLNQLLTSPSS
ARSYPNYPQGDYNNQEGASKGPGDMGSSQYGGVHPGWQQRAQHQPPMSPGNTGQPPNRNQ
PPSPMDQVGKMRGQSYGGGPNPYSQQQQQQQQQQQQQQQQGAPAGPGPQQGGSYPGQGYG
PPGPQRYPMGMQNRTPGAMGGMQYGQQISAYGQQGPGGYSQQSQGYYGQHGAPPHPGQQQ
QQQPPYSGQPQGSSGAPYPQQGHPAQPSGQHGQPGPPYQQSQGPHGPSPGQPPYSQPPQS
QPGQPPYAPPQQQPQQQQGPGPQSQQGPQGQPGYQQPSGPGQTPQQQTPQQQPQPQQGPP
QQQQQQQQQQQQHQQQQQQQQQQQQQHQQQQQQQQQQQQQQQQQQQPGGPSPQAQQPPGH
GQQGQPTPYSQTPPLQQPPQQQQQSPYQRFPPPPQELSQDSFSSQSSAPPSNQPMASNKS
SQEDSMQGRPSSLPDLSGSIDDLPTGAEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTS
PHLPGIRGPSPSPVGSPASVTPSRTGPLSPAAVPGNQMPPRPPSVQSDTIMHSSMNQSAM
GQERVYMRNPQMPPYGSPGQPGSALSPRQSSGGQMHAGMGPYPQNNSMGNYGPQGAQYGP
QGYPRQPGYTGMPNANYPTGPGMSGSMNPMPGQASGAPYGNIPPGRIGPGQMGARPFGPA
MASNMAGMPPQVASGMCPPPAMNRKDGGPSMHHGGPTNSVHNRPPGYPNMSQGMMGTGSP
YGPGMNSMHGMMNQGGPGPYPMGANIVNNTPGMAPTPEFGVEKMNPTQKINNKVEGTPKP
ETKKKSSSSTITNEKITRLYELGPEPERKMWVDRFLAFAEEKVMGMNNLPAVGRKPLDLF
RLYMSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGED
PPADFFNTDTKKNQPKVQPPSPAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPASTPHTQM
PPMPGVRSSVNLQDPFADGGDPAFSRRNALTPNSQGFQPGMGGPEMIARMGPYESNKDPF
GGMRKAGEQFMQPGPNSGMAEQYNRGPPGPMGNMQMGQRQSYPYGYDRRPEPGMGPDGSM
GPGAPQPNMMPSGADTGMYSPSRPPPQQRHESYTNQYPGQGAPPGGPYPNQQPGMYPQQQ
PNYKRPVDGGYGPPAKRHEGEMYNVPYSGQQQPGPQPSGPQGQQEMYNQYNAYPGGDRRP
PGPQNQFPFPFGRDRVPSSAGPNSQSPMPPQMMSSAMPSGPDGPQGPMWQGRNEMGYPNY
PNRQGPPVPGQGPGYHGMNRSEEMMPSDQRMNHEGQWPGHVNQRQPPFGPGGSGPPMTRP
LPSTYQTSQNHIPQVSSPTPMPRPMESRTSPSKSPYMHPGIKVQKAGPPVPASHIGQAPV
QQPMIRRDVAFPPGSVEASPPHLKPRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDT
INILLYDDNSITTFNLCQLPGFLELVVEYFRRCLIEIFGILKEYEVGDPGQRTLIDPNAA
EDPDDDILMPEGEGMDVDEEDEEDEEVEETKATPDILALVQVKQEEESSHKRTSSEDEDE
EKEREPSIKEPNTSTSGSSQEPNLHSEMPKQASKFDKLPIKVVRKKNPFLVNHSSKLGQR
QSFDSGLTHWSIGGGDTTEHIQTHFESRMDLLKQRKRKPTATESRKKVQATETATDPDKS
KSNGESRPRQQPPESSEPQKSPAEKTPPPPPLLPIGAPVTATIDDVLSARPGSVTEEVVR
GGAEEQKENGKYLFSINPDLQSRRNIKILEDEPHSKDETPLSTLSDWQDSLARRCICVSN
IVRSLSFVPGNDLEMSKHPGLLLLLGRLVLLHHRHPERKQAPVTYEKEEEEDEGVSCERD
EWWWDCLEVLRENCLVTLANISGQLDLSIYPESICLPLLDGLLHWAVCPSAEALDPFPTL
GPHGSLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGSLVRLVGERKVAVCREM
AVVLLANLAQGDSLAARSIAVQKGSVGNLLGFLEDSLAATQYQQSQSSLLQMQGGPQFEP
TSVDMMRRAARALHALAKVEENHTEFTLFESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
7023 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgctagcgtcgccactctcaacactagcccgccatccgaactcaaa
aagccggatcgggacccacaggaggagtcggtaccaggagagaaacagcatgaaaataag
gatccgggacctgacggcggatctcccggccagaaggagctgcaggacgggaccgatgct
tcaaatgctgggggaggaggggatcctgacatgaagaacggcaacgggaatttgccgagg
gtaaataataatagcagtaatcagaatgattcaggcgggcccgaggggaataaccatccc
ggaatgggacaccatcatccgggccccttccctccacctccttacggttacaaccagcac
tacagccgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgca
tcggggccgggcatgatggacccgtacccccctaattcacacgaacacggctacccaaac
cattataacaactacagccctttccagaacaggacttcttatcagggccaaggatacggg
gccatgaattccccgcgtaacaaccagcctccggcggctggggggcagccaggcaagcag
cagccagcaggaggaaccaccgctatggctgcctcttacaataatcagaggtataacatg
ggaacccaacaaccaacgtccacgccaactttaaatcagcttttgacatcccctagctcc
gcgaggagctacccgaattacccccaaggagactataacaatcaggaaggggccagcaag
gggccaggagacatgggcagcagtcagtatggtggggtccatccgggttggcaacaaagg
gcccagcatcagcctcccatgagcccgggaaacactggacaacctcccaacagaaaccag
cctccaagcccaatggaccaggtcggaaaaatgcgcgggcagtcatacggaggagggccc
aacccctactcgcagcagcagcagcaacaacagcagcagcagcagcagcaacagcagcaa
ggggctcccgcagggcccggaccccagcagggaggctcttacccaggacagggctacgga
cccccgggccctcagaggtatcctatggggatgcagaaccgaacacctggcgctatgggc
ggcatgcagtacggacagcagatttcagcttatggacaacaggggcctggtggctacagt
cagcagagccaaggctactacggtcagcacggcgccccccctcaccctggccagcagcag
cagcagcagcctccatactctggtcaaccccagggcagctctggagctccctacccccaa
caaggccaccccgcgcagccttctggccaacacgggcagcctggacctccgtaccaacaa
tcccaaggtccacacggtccttctccgggtcagcccccatatagccagcccccacagtct
cagccaggacagcctccctacgcccctccccagcagcagcctcaacagcagcaggggccg
ggtccccaaagtcagcagggcccccagggccagcctggctatcaacaaccctctgggccg
gggcagacgccacagcagcaaactccgcagcagcaaccgcaaccgcagcaaggacctcca
caacagcaacaacaacaacaacaacagcagcagcagcatcaacaacaacaacaacaacaa
caacaacagcagcagcagcatcaacaacaacaacagcagcagcagcagcaacaacagcaa
caacagcagcagcaacaaccaggaggtccatctcctcaagcccagcaacctccaggtcac
ggccagcagggtcagccgacaccttactcccagacacctccactgcagcaaccaccacaa
cagcagcagcagtcaccatatcagaggttcccgcctcctccacaggaactctcccaggat
tcctttagctcccaatccagcgctcctccttccaaccagcccatggcttccaacaagagc
agtcaagaagacagcatgcagggccggccatccagtctgccggatctgtcgggctcgatc
gacgacctgcccaccggtgcagagggggccctgagccccggcgtcagcacctcaggtgta
tccagcagtcagggcgagcagagcaatcccgcccagtcgcccttctcgccgcacacgtcg
ccccacttgccaggcatacgtgggccctcgccatcacccgtgggttcccccgccagcgtc
accccctcccgcaccggccctctgtcccctgctgccgtgccaggtaatcagatgcctccg
cggccgcccagcgtccagtccgacaccatcatgcactcttccatgaaccagtccgccatg
ggccaggaaagggtgtacatgcgtaaccctcagatgcctccctacgggtcccctggtcaa
cctggctccgccttatctccacgccagtcctcgggaggccagatgcatgctgggatgggg
ccgtatcctcagaacaactcaatggggaactacgggcctcagggggcgcagtacggtcca
caaggttaccccaggcagcccggctacacggggatgcccaatgccaactaccccaccggc
cccggcatgagcggctccatgaaccccatgcctggtcaggcgagtggggctccatatggc
aacatcccgcctggcagaataggcccggggcagatgggtgctcggccctttggtcccgca
atggcctcaaacatggccggcatgcctcctcaggtggcgtctgggatgtgtccccctccg
gctatgaacaggaaggacggcggcccctccatgcaccacggggggcccacaaactccgta
cacaacaggcctcctggctaccctaatatgtcccagggcatgatgggaacaggctctcca
tacggccccggcatgaacagtatgcacggtatgatgaaccagggagggcctgggccttac
ccaatgggagcaaatatagtcaacaacactcctggaatggctcccacaccggagtttggc
gtggaaaaaatgaaccctacccaaaagataaacaacaaagtggaggggactcccaagcct
gaaacaaaaaagaagtcgagctcttccaccatcactaacgagaagatcactcgtctgtac
gagcttggtccggagccagagaggaagatgtgggtggatagattcctggccttcgctgag
gagaaggtgatgggcatgaacaacctgcccgcagtcggacgcaagcctctcgatctcttc
aggctctacatgtccgtcaaagagatcggcggcctcacccaggtgaacaagaacaagaaa
tggagggagctggccaccaacctgaacgtgggcacgtcgagcagcgcagccagttcactt
aagaaacagtacatccagtgtttgtacgccttcgagtgcaagattgagcgtggcgaggac
ccgcccgcagacttctttaacacggacaccaaaaagaaccagccgaaggtccagcctccc
agcccagctggttctggatccctgcaaggaccccagactcctcagtccaccagtagttcg
atggcagaaggtggagacctgaaacccccgaccccagcctccaccccgcacacgcaaatg
cctccaatgcctggcgtcaggagtagcgttaacctgcaggacccctttgcggatggcgga
gacccagcgttttccagaaggaacgcattgactcccaattcacagggcttccagcctggg
atgggtgggccggagatgatcgctcgaatgggtccctacgagtccaacaaggaccctttc
ggtggcatgaggaaagctggagagcagttcatgcaaccaggtcccaacagtgggatggca
gaacagtataaccgaggcccaccaggcccgatgggtaacatgcagatgggccagaggcaa
tcgtacccttacggatacgacagaagaccggagccgggcatgggccctgacggcagtatg
ggaccaggagcgcctcagcccaacatgatgccttccggtgccgacacggggatgtactcg
cccagccgccctccgccacagcaacggcacgaatcctataccaatcagtaccccggccaa
ggagctccccctggtggcccatacccaaatcagcagccaggaatgtatccacagcagcaa
ccgaactacaagcgtcccgtggatggagggtacgggcctcctgccaagcgccacgaggga
gaaatgtacaatgtcccctacagtggtcagcagcagccaggaccccagccctcgggaccc
cagggccaacaggaaatgtataaccagtataatgcgtatccaggaggggaccgcagacca
ccgggcccacagaaccagttccccttcccctttggccgggaccgagtaccgtcatctgct
ggccccaactctcagtctccaatgcctccccaaatgatgtcaagcgccatgccttcgggt
cccgacggcccccagggcccaatgtggcaaggtcgcaatgagatgggctaccctaactat
cccaacagacagggacctcccgtaccaggccagggccccggctaccacggcatgaaccgc
tcggaggagatgatgccctcagaccaacgcatgaaccacgaggggcagtggcccggccac
gtcaaccagcggcagccaccgtttggccccggcggttctgggcctcccatgaccagaccc
ctgccctccacctaccagacttcccagaaccacattcctcaggtgtcaagcccaacacca
atgccccggcccatggaaagcaggacgtcacccagcaagtccccctacatgcatccgggg
attaaggtgcagaaagctggacccccagtacccgcctcccacattggccaggccccagtg
cagcaacccatgatcaggcgagatgtggccttcccacctggctctgtggaggcctcccca
ccccatctcaaacctcgcagacggctcaccatgaaagacattggcactcctgaggcttgg
agagtgatgatgtcactaaagtcaggcttactagctgagagcacctgggccttggacacc
attaacattttactgtatgatgacaatagcattactactttcaacttatgccagctgcct
ggtttcctggagctggtggtggagtacttcagacgctgcctcatcgagatctttggcatc
ttaaaggagtacgaagtcggagaccccggccagcgcaccctcatagaccccaacgcggct
gaggatcctgatgatgacattcttatgcctgaaggcgagggcatggacgtggacgaagag
gacgaagaggacgaggaggtggaggaaacgaaggccactcccgacatcctcgcactggtc
caggtgaaacaggaggaggagagctcacacaaacgcacgtcttcagaggacgaggacgag
gagaaggaaagggagccttctatcaaggaacccaatacctctacctcggggtcctcccag
gagcccaacctccactcggaaatgcccaagcaggccagcaagtttgataaactccccatc
aaggtggtgcggaagaagaatcccttcctggtcaaccactcgtccaagcttgggcagcgg
cagagctttgacagcggcctgacacactggagcattggtggcggcgacaccaccgaacac
atccagactcacttcgagagccggatggaccttctcaagcagcggaaacgcaagccaaca
gccacggagagccgcaagaaggtccaggcgactgagactgcgacagaccccgataaatcc
aagtccaatggggagagtagacctcggcagcagccgcccgagtcttctgaacctcagaag
tctccggcggagaagactcctcctcctcctcctcttcttccgattggtgcaccagtcact
gccaccatcgacgatgtgctatctgcccgcccgggctcggtcacagaggaagtggtgcgt
gggggcgcggaagagcagaaggagaacggcaagtacctgttcagcatcaaccctgacctc
cagagccgacgcaacatcaagatcctggaggacgagcctcacagcaaggacgaaacgccg
ctcagcactctgtcggactggcaggactcgctagcccggcgctgcatctgcgtttccaac
atcgtgcgcagcctctcattcgttcccgggaacgacctggagatgtcgaaacacccgggc
ctcctgctgctgttgggccgcctggtgctgctccaccacaggcaccccgaacgcaaacag
gccccggtcacctacgagaaggaggaagaggaagacgaaggcgttagctgcgagagagac
gagtggtggtgggactgcctcgaggtgttgagggagaactgcctcgtcactctggcgaac
atctcaggccagctggacctttctatctatccagagagtatatgcctgccgctgctggat
ggcctgctccactgggccgtctgcccctcagcagaggccctggaccccttccccacgctg
gggccccacggctcactttccccccagagactggtcctcgagaccctcagcaagctcagc
atccaggacaacaacgtcgacctcatactggcaacgccaccgttcagccgcttggagaag
ctgtacggctcgctggtgcgcttggtcggtgagcgcaaagtggcggtttgtcgagaaatg
gcggtcgtcctgttggccaacttggcccagggcgacagcctagcggcgcggtctatcgct
gtacagaaaggcagcgtgggtaacctgttgggcttcctggaggacagcctagctgccaca
cagtaccagcagagccagagctccctgctacagatgcagggaggacctcagtttgagccc
acgagtgtggacatgatgcggcgggcggcccgggccctgcacgcgctggctaaggtggag
gaaaaccacacggagttcacgttgttcgagtcgcggctactggacatctcagtgtcccca
cttatgaactctctggtgtcccaagtgatctgtgacgtactgtttctgatcggccagtca
tga
DBGET
integrated database retrieval system
