Clinocottus analis (woolly sculpin): 137784505
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Entry
137784505 CDS
T10471
Symbol
thrb
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04080
Neuroactive ligand-receptor interaction
cana04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
137784505 (thrb)
04081 Hormone signaling
137784505 (thrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cana03000
]
137784505 (thrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cana03310
]
137784505 (thrb)
Transcription factors [BR:
cana03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
137784505 (thrb)
Nuclear receptors [BR:
cana03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
137784505 (thrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CpXC
Motif
Other DBs
NCBI-GeneID:
137784505
NCBI-ProteinID:
XP_068431332
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All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MNYCIPDMYEMPHSGMGGYAVQGGGEHCMYSGEGPGYCEPQPLHHPPLHHPPLMDQPWPP
GQHCSCSYAGGSPDFKSEYCSMEIPLSHFHHQPEYFPEIRPDFSHLQWMQEVHKKGYIPS
YLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLNPTYACKYEGKCVIDKVTRN
QCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEENRERRRKEEQQKTVLDRQEPTQEEW
DLIRMVTEAHMATNAQGNHWKQKRKFLSAAGVKETKPEEIGQASMVNTPEGNKVDIEAFS
QFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTL
NGEMAVTRGQLKNGGLGVVSDAIFDLGVSLSSFNLDDSEVALLQAVILLSSDRPGLSSVE
RIERCQEEFLLAFEHYINYRKHKLAHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTEL
FPPLFLEVFED
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaactactgcatcccagacatgtacgagatgcctcactcgggcatgggcggctacgcg
gtgcagggtggcggggaacactgcatgtactcgggcgagggacccgggtactgtgaaccg
cagcctctgcaccacccgcctctgcaccacccgcctctcatggaccagccgtggccgccc
ggccagcactgctcctgctcgtacgcgggcggctcgcctgatttcaagagcgagtattgc
agcatggagatccctcttagtcatttccaccaccagcctgagtatttccccgagatcaga
cctgacttctcacacctgcagtggatgcaggaggtgcacaagaaagggtacatcccaagt
tacctagacaaggatgagctatgtgtagtgtgcggggacaaagccacgggctaccactat
cgctgcatcacctgtgaaggttgcaagggtttcttcaggcggacgatccagaagaacctc
aacccgacctacgcctgtaagtacgaggggaagtgcgtcatcgacaaagtgaccaggaac
cagtgccaggaatgtcgcttcaagaagtgcatcgcggtggggatggcaaccgacctggtg
ttggacgacagcaagcggctcgccaagcggaagctcatcgaggagaaccgggagcgtcgt
cggaaagaggaacagcagaagacggtgttggaccgccaggagcccacccaggaggagtgg
gacctcatccgtatggtgactgaggcccatatggccacgaacgcgcagggcaaccactgg
aagcagaagaggaaatttctgagtgcagcgggggtgaaggaaactaagcccgaggaaatt
ggtcaagcgtccatggtcaatacgcctgaaggaaacaaagtggacatagaagccttcagt
cagtttacaaaaattatcacccctgccataacccgagtggtggactttgccaaaaaactg
ccaatgttttgtgagctgccttgtgaagaccagatcatcctgttgaaaggctgctgcatg
gagatcatgtcactgcgagccgctgttcgctatgatccggagagtgagactctcacgctc
aacggcgagatggcggtcacacggggtcagcttaagaatggaggattgggcgtagtgtcg
gatgccatctttgaccttggcgtgtcgctatcctctttcaacttggatgactcggaagtg
gctcttctacaggctgtcatcctgctttcatctgatcggccgggcctgagcagcgtggag
cgaatcgagcgctgccaggaggagttcctgctggcctttgaacattacatcaactaccgc
aaacacaaattggcgcatttctggcccaagctgctaatgaaggtgacggacctgcggatg
atcggcgcctgccacgccagccgattcctccacatgaaagtggagtgtcccaccgagcta
ttccctcctctcttcctggaggtcttcgaggactga
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