Clinocottus analis (woolly sculpin): 137784529
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Entry
137784529 CDS
T10471
Symbol
snx27a
Name
(RefSeq) sorting nexin-27a
KO
K17936
sorting nexin-27
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137784529 (snx27a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cana04990
]
137784529 (snx27a)
Membrane trafficking [BR:
cana04131
]
Protein recycling
Others
Others
137784529 (snx27a)
Domain-containing proteins not elsewhere classified [BR:
cana04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
137784529 (snx27a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
PDZ_2
VirE3
SNX17-31_F2_FERM
SNX17_FERM_C
DarA_N
USP7_C2
Motif
Other DBs
NCBI-GeneID:
137784529
NCBI-ProteinID:
XP_068431386
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MDKMADVEDDETQSAPPSASRNGPAVGSSAGQNIATVTVTSGPRMVRIVKSESGYGFNVR
GQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGIGKGDRILEVNGVSVEGATHKQVV
DLIRAGEKELVLAVLSVPAQEADGLEVGDDVQPNYDYSDKQAVPISVPTYKHVEQHAERF
VVYNVYMSGRQLCSKRYREFAILHQNLKREFSNFNFPKLPGKWPFSLSEQQLDARRRGLE
EYLERVCSVRVVGESDIMQEFLSESDENYNGVTDVELRIALPDKTTISVRVRKNSTTDQV
YQALVMKVGMDSIMASYFALFEVINHSFVRKLVPNEFPHKLYVQNYTSAVPGTCLALRKW
LFSFQEEELLRDNPLALHYCFHQALEDVKKGFIKTEDKSYQLQKLAEQRKMATYLSLLRT
CEGYNEVAFPHCSCDSRRKGHVITAISIHHFKLHACTEDGTLENQVIAFEWAEMQRWDTD
EEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQVEEEASDKDNKNCS
NNDYLPPLETQQKGWRHLGGEIATS
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggataagatggcggatgttgaagacgatgagactcagtcggctcccccttcggcatcc
cgtaacggcccggctgtcggttcgtctgcgggccaaaacatagcgaccgtgacggttacg
tcaggtccgcggatggtgaggatagtcaagtcggagtccggctacgggttcaacgtccgc
ggtcaagtcagcgaaggtgggcagctccggagcatcaacggggagctgtacgctcctctt
cagcatgtcagcgccgtgctgcccgggggagcggcggaccgagccgggataggaaagggt
gaccggatcttggaagttaatggtgtgagtgtggaaggtgccacccataaacaagtggtg
gacctcatccgtgctggggagaaggagcttgttctggctgtgctgtctgttcctgctcag
gaggctgatggattggaagtaggagatgatgtccaacccaactatgactacagcgacaag
caggcagtgcccatttcagttcccacgtacaaacatgtagagcagcacgccgagaggttt
gtggtctacaacgtgtacatgtcaggtagacagctgtgctcaaagcgctaccgggagttt
gccatcctgcaccagaacctaaagagggagttttctaacttcaacttcccaaagcttccc
ggtaaatggcccttctccctctctgaacagcagctggacgctcgccgtagaggcctggag
gaatatctcgagcgagtttgctctgtgcgggtggtcggagagagtgacatcatgcaggag
tttctctctgaatcagatgagaactacaatggagtgacagatgtagagctgcggatagcc
ctgccagacaagaccaccatctctgtcagagtacgcaagaacagcaccactgatcaggtg
taccaggcattagtgatgaaggttgggatggacagtattatggcgagctactttgccctt
tttgaagtcatcaaccactcctttgtgcggaagctggttcctaatgagtttccccacaag
ctctatgtgcagaactacacgtcagcagtgccggggacttgcttggcgctccgcaaatgg
ttgttcagcttccaggaggaggagttactaagagacaacccgctggcactgcactactgc
tttcaccaggcactggaagatgtgaagaagggattcataaaaacagaggacaaatcctac
cagctgcagaaactggcagagcagcgcaagatggccacgtacctgagtctgctgcggaca
tgtgagggctacaacgaggtggccttcccccactgctcctgtgactccaggaggaaagga
catgtcatcacagctatcagcattcatcacttcaagctgcatgcttgtaccgaggacggc
acgctggagaaccaagtgatagctttcgagtgggcggagatgcagcgctgggacacggat
gaggaggggatggctttctgctttgaatatgccagaggagagaagaaacctcgctgggtc
aagatcttcactccatatttcaactacatgcatgagtgctttgagcgggtcttttgtgag
ctgaagtggaggaaacaggttgaggaagaggcatctgacaaagacaacaaaaactgcagt
aacaacgattatctgcctcctctggagacacagcagaagggatggcgccacctcggggga
gagattgcaacttcctaa
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