Clinocottus analis (woolly sculpin): 137784547
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Entry
137784547 CDS
T10471
Name
(RefSeq) collagen alpha-1(XIV) chain-like isoform X1
KO
K08133
collagen type XIV alpha
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cana00535
]
137784547
Proteoglycans [BR:
cana00535
]
Extracellular matrix (ECM) proteoglycans
Others
137784547
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
DUF4959
VWA_3
Motif
Other DBs
NCBI-GeneID:
137784547
NCBI-ProteinID:
XP_068431413
LinkDB
All DBs
Position
Unknown
AA seq
1856 aa
AA seq
DB search
MQFSVRLSLGLLGFVLVSLFPHPARSQVSSPRRFRSKLLSAGRLLVSWKEPRGAFEGYKV
VYSTRPGGEQTEVEVSKQEAKLLIEDFDPSQEYDFKIVAVSGGQQSKALQAKHEAQQAGV
EMVQSQQRQDDGATAENNEIFEDEDEYMCKTPSISDIVILVDGSWSIGRINFRLVRTFLE
NLVRAFSVGSDKTRIGLAQYSGDPRIEWHLNAHSTKDAVLEAVKNLPYKGGNTLTGLALT
YILETSFRPESGSRSGVPKIGILITDGKSQDDVIPPARSLRDAGIELFAIGVKNADENEL
RAIASPPEETHMYNVADFSVMSDIVETLSRTVCERMEQLDQQLRGGVPAPPPVSVAPPRD
FVTSDITARSFRVAWTPAPGQVEKYRVVYYPASGGQPEEKVVPGSQSSVELNYLNSLTEY
QVALFAVYRSSASEALRGSATTLALPMVNDLELFDISHSTMRVRWMTAAGASGYMILYAP
LTGGEPADEKEVKVEDSVNEVELEGLTPATEYTVTVYALYGEEASDPMTSQQTTLPLTPA
RNLRFSDVDHSSSRLTWDSASRKASGYRIMYVKTDGVQTNEVDVGRVTTWLLSNLTSLTE
YTVGVFAVYDEGQAEAATDSFTTKTVPDPVDLRSSEISTDSFRVSWKHPASDVALYRLSW
TPTDGGETDEVLVNGNLNTYLIRGLRPLTEYEVLLAAVYLNEAESDEVAIVESTVEKTTT
VATTTTTAATPRYGFRNMRIDEETTFSMRVAWQPTDTRNVRNYRLSFVSAKGDRAEEQRT
VPTGQNSLVLQPLLSDTEYRVSITPVYPDGDGPPAVRTGRTLPLSAPKSLRVSEEWYNRF
RISWDAPPSPTMGYRVVYQPVSAPGPALETFVGEDVNTMLIVNLLSGTEYSVKVIASYTT
GSSDALSGRAKTLSLGVTNLSAYQVRMSTFCGQWQAHRHASSYRVVLEALPSGQKQETKL
SGAANRHCFSGLAAGSPYRMSVYALLQDGTEGPAASVTERTQPAPTPKPTTPPTTTPLPT
IPAAKEVCKEARADLVFLVDGSWSIGDENFLKIIRFLYSTSGALDRIGPDGTQVAIAQFS
DDARTEFKLNSYSDKERLLDAINKISYKGGNTKTGRAIQHVKENIFTVEGGVRRGIPNVL
VVLTDGRSQDDVNKVSKEMQMEGYIVFAIGFADADYGELVSIASKPSDRHVFFVDDLDAF
TKIEEKLVTFVCEAATATCPSIPMSGSTTPGFRMMELFGLVESRYGGVPGVSLVPGTFNT
FPSFHLHSDAFLAQPTRYLHPEGLPSDYTVTLLFRLLPDTPEEPFALWEILDKNNEPLVG
VILDNGGKTLTFFNNDYKGEFQTVTFEGPEVKKLFYGSFHKLHIAVGKTSAKVVIDCSAV
EEKSINAAGNITMEGLEVLGRMVRSRGNKDNSAPFQLQIFDIVCSTSWASRDKCCELPGL
RKEADCPAMPKACTCTQDSKGPPGAAGPTGGPGIRGARGDRGEPGPVGLTGPVGDPGVPG
PQGPQGLQGHSGRSIIGPPGGQGEQGQKGEAGQQGAQGIAGRPGAPGREGPAGSRGLPGK
DGPLGRPGPSGTIGTPGAPGAPGNTGSSGKQGELGPPGLPGSKGERGERGDLQSTASVQD
IARQVCEQLIQSHMARYNSILTHVPSPPVSIRTVPGPPGEPGRPGAPGPQGEQGPSGRPG
FPGQNAQNGQPGERGQSGEKGDKGSQGVGVQGPRGPPGPPGSQGQGRPGSQGPSGRPGNP
GSPGRTGVPGPVGSAGPPGYCDQNSCVGYNVGEDDTDRGAAVPAVQLPPNVFQNYGEPEE
DDPYRYYEPNYPAPRPVAPDDPALQGDDADVDLRSAGVHRIARRPEGVEAGVQRRG
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccgtgagactgagcctcggcctgctgggcttcgtcctcgtctccttgttt
cctcatccagcgaggagtcaagtttcgtcgccgcggagatttcgttccaaactcctgagc
gccggccggctgctcgtctcctggaaggagcccagaggagcgtttgaaggctacaaggtg
gtttactccaccaggccaggtggagagcaaacggaggtcgaggtatcgaagcaggaagcc
aagctgctcatcgaggactttgacccgtctcaagaatacgactttaagatcgtggctgtc
agcggaggacagcagagcaaagctctgcaggccaaacatgaagctcagcaggccggcgtg
gagatggttcagtcccagcagagacaagacgacggcgccacggcggagaacaacgagatc
tttgaagacgaagacgagtacatgtgcaagacgccgtccatctcggacatcgtgatcctg
gtggacgggtcctggagcatcgggcgcatcaacttccggctggtccggaccttcctggag
aacctggtgcgggccttctccgtggggagcgacaagacccggatcggtctggctcagtac
agcggtgacccccgcatcgagtggcacctcaacgctcactccaccaaagacgccgttctg
gaggccgtgaagaaccttccgtacaaaggagggaacacgctgacaggtctggctctgacc
tacatcctggagaccagcttcagacccgagtccggctcccggtccggcgttcccaagatc
gggatcctgatcacggacgggaagtctcaggatgacgtcatccctccggcccgcagcctg
cgggacgccggcatcgagctgttcgccatcggtgtgaagaacgctgatgagaacgagctg
cgtgccatcgcgtcgcctccagaggaaactcacatgtacaacgtggccgacttcagcgtg
atgagcgacatcgtggagacgctcagcaggacggtgtgcgagcgcatggagcagctggac
cagcagctcagaggaggagtacccgccccccctcccgtctccgtggctccgccccgtgac
ttcgtgacctctgacatcacggcgcgcagcttccgggtggcgtggacgccggcgccgggt
caagtggagaagtaccgcgtggtgtactacccggccagcgggggccagccggaggaaaag
gtggtcccgggctcgcagagcagcgtggagctcaactacctcaactccctgacggagtac
caggtggcgctcttcgccgtctaccgcagctcggccagcgaggccctgagaggcagcgcc
accacgctggcgctcccgatggtcaacgacctggagctctttgacatctctcacagcacc
atgagggtccgctggatgacggccgccggggcttctgggtacatgatcctgtacgcgccg
ctgacggggggcgagcccgcggacgagaaggaggtgaaggtggaggactcggtgaacgag
gtggagcttgaaggactgactccggccacagagtacacggtgacggtttacgctctgtac
ggagaggaggccagcgaccccatgaccagccagcagaccacgttgccgctgactccggcg
aggaaccttcgtttctccgacgtggaccacagctcctcccggctcacctgggactccgcc
tccaggaaggccagcgggtaccgcatcatgtacgtcaagaccgacggcgtccagaccaac
gaggtggacgtcggccgcgtgacgacctggttgctgagcaacctgacctcgctgacggag
tacacggtcggcgtgttcgccgtctacgacgaggggcaagccgaggccgccaccgacagc
ttcaccacgaagaccgtcccggaccctgtggatctgaggagcagtgagatctccaccgac
agcttcagggtgtcgtggaagcacccggcctctgatgtggcgctgtaccgactcagctgg
acgcccacggacggaggagagaccgacgaggttctggtgaacgggaacttgaacacttac
ctgatcagagggctccgccccctcaccgagtacgaggtcctcctcgccgccgtctacctg
aacgaggcggagagcgacgaggtcgccatcgtggagtccaccgttgaaaaaacgaccacc
gtggcaacgaccaccaccaccgcagccacgcctcggtacgggttcaggaacatgaggatc
gacgaggagaccaccttcagcatgcgggtggcctggcagcccacggacaccaggaacgtc
cggaactaccggctgagcttcgtcagcgccaaaggagaccgggccgaggagcagaggacg
gtgcccacgggccagaacagcctggttctgcagccgctgctgtcggacaccgagtacaga
gtctccatcacgcccgtttaccccgacggagacggaccgccggcggtgaggacgggccga
acgcttcccctctcggccccgaagagcctgcgcgtatcggaggagtggtacaaccgcttc
aggatcagctgggacgccccgccgtcccccaccatgggctaccgggtcgtgtaccagccc
gtgtccgctccaggcccggctctggagaccttcgtgggcgaagacgtgaacaccatgctg
atcgtcaacctgctgagcggcaccgagtacagcgtgaaggtcatcgcctcgtacaccacc
gggtccagcgacgctctgtcagggcgggccaagaccctgtctctgggcgtgaccaacctg
agtgcgtaccaggtgaggatgagcaccttctgcggccagtggcaggctcaccgccacgcc
agcagctaccgggtggtcctggaggccctgcccagcggccagaagcaggagaccaagctg
agcggagcggccaaccgccactgcttcagcggcctggcggccggctcgccgtacaggatg
agcgtctacgcgctgctgcaggacggcaccgaggggccggcggccagcgtcacggagagg
acgcaacccgctccgaccccgaagccgaccacgccccccaccaccacgccgctacccaca
atccccgctgccaaggaagtctgtaaggaagccagagccgacctggtgttcctggtggac
gggtcctggagcatcggggacgagaacttcctgaagatcatccgcttcctgtacagcacg
agcggagcgctggaccggatcggaccggacggcacgcaggtcgccatcgctcagttcagt
gacgacgctcgcacggagttcaagctgaactcgtacagcgacaaggagcgactgctggac
gccatcaacaagatctcctacaagggaggcaacaccaagacggggcgagccatccagcac
gtgaaggagaacatcttcacggtggagggcggggtcaggaggggcatccccaacgtgctg
gtggtcctcacggacggccgctcgcaggacgacgtcaacaaggtgtccaaggagatgcag
atggaaggctacatcgtcttcgccatcggcttcgcggacgcagactacggcgagctggtg
agcatcgccagcaagcccagcgaccgccacgtgttcttcgtggacgacctggacgccttc
accaagatcgaggagaagctggtgaccttcgtgtgcgaggccgccaccgccacctgtccg
tccataccgatgagcggcagcaccacgcccggcttccgcatgatggagctcttcggcctg
gtggagagccggtacggcggcgtccccggcgtctcgctggtgcccggcaccttcaacacc
ttccccagcttccacctgcacagcgacgccttcctggctcagcccaccaggtacctgcac
cccgaggggctgccctccgactacaccgtcacgctgctgttccggctgctgcccgacacc
ccggaggagccctttgcactctgggagatcctggacaagaacaacgagccgctggtgggc
gtcatcctggacaacggagggaagacgctgaccttcttcaacaacgactacaagggagag
ttccagaccgtgaccttcgaagggcccgaggtcaagaagctcttctacggcagcttccac
aagctgcacatcgccgtcggcaagacgagcgccaaggtggtgatcgactgcagcgccgtg
gaggagaagagcatcaacgcagcggggaacatcaccatggagggcctggaggtgctgggg
aggatggtgcggtccagagggaacaaggacaactctgcaccgttccagctgcagatcttc
gacatcgtctgcagcacgtcgtgggccagcagagacaagtgctgcgagctgccgggactg
aggaaggaggccgactgcccggccatgcccaaagcctgcacctgcacccaggacagcaaa
ggcccgcccggcgccgccggacccacaggcggccccggcatcagaggagcccgaggggac
cgtggagagcccggcccggtggggctgacgggacctgtaggggacccgggagtaccagga
cctcaaggaccccaaggactgcagggacacagcggacgctccatcatcggacccccaggc
ggccaaggagagcaaggacagaaaggtgaagctggacaacaaggagctcagggaatagct
ggcagacctggagctccaggaagagaaggacctgcaggatccagaggtctgccgggtaaa
gacgggccgctggggaggccggggccttcagggaccatcgggacgccaggagccccagga
gcgcccggtaacacgggttcctctgggaaacaaggagaactgggaccgccgggtcttcct
ggaagcaaaggagagagaggtgaacggggcgacctgcagtccaccgcctccgtccaggac
atcgcccgccaggtctgtgagcagctgatccagagccacatggcgcgctacaactccatc
ctgacccacgttcccagtccaccggtgtccatccgcaccgtgccgggcccccccggtgag
cccggcagaccgggggccccggggccccagggggagcagggaccctcggggagacccggc
ttcccgggacagaacgcacagaacgggcagcccggagagagaggtcaatcaggagagaag
ggcgataaaggatctcaaggtgttggagtccaaggcccccgaggacctccaggacctcca
ggttcccagggtcagggtagacctggtagtcagggtccgtcgggtcggcccggtaacccc
ggttctcccggtcggaccggcgtccccgggcccgtcggctctgccgggccgccgggctac
tgcgaccagaactcctgcgtgggctacaacgtgggagaggatgacactgaccgcggcgcc
gctgtccccgcagtccaactgccgcccaacgtcttccagaactacggcgagcccgaggag
gacgacccgtaccgctactacgagcccaactacccggccccgcggcccgtggcgcccgac
gacccggcgctccagggcgacgacgccgacgtcgacctcaggtcggccggcgtccaccgc
attgcccggcgcccggagggagtggaggcgggagtccagcgaagaggctaa
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