Clinocottus analis (woolly sculpin): 137784626
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Entry
137784626 CDS
T10471
Symbol
nfatc1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04010
MAPK signaling pathway
cana04020
Calcium signaling pathway
cana04148
Efferocytosis
cana04218
Cellular senescence
cana04310
Wnt signaling pathway
cana04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
137784626 (nfatc1)
04310 Wnt signaling pathway
137784626 (nfatc1)
04020 Calcium signaling pathway
137784626 (nfatc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
137784626 (nfatc1)
09143 Cell growth and death
04218 Cellular senescence
137784626 (nfatc1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
137784626 (nfatc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cana03000
]
137784626 (nfatc1)
Transcription factors [BR:
cana03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
137784626 (nfatc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
137784626
NCBI-ProteinID:
XP_068431546
LinkDB
All DBs
Position
Unknown
AA seq
868 aa
AA seq
DB search
MKSAEEEAYGYAPNVSLSLPLGNPCLPSQYHSLQSSAAAASVAEPLGYDGRDDASAAGYY
SSPRLNGAPTLESPRIEITAYGQFPEEEAEESNLPVAKRVNSIVTLTLPCADSYRDPSCL
SPASSVSSRSCHSDASSYESGFSYNYENSPQNSPWQSPSVSPKGSTLALPGDGCTSGGSP
SRHSPSTSPSRAGVTDDGWMGQRGSRPNSPCGAKRKYSFNGGGGAAPHKHYPYSPNVSPG
LSPQTSPRLSITEESWLPNNTNQYTNSAILAAINALTTEVDLGEGIPIKARKTSQEHGGA
TTVSLKLEPGGEELSPAELCQDEHPSNRLPLKKEIYCGGFLDVPQHPYSWSKPKQYVSPS
LPALDWQLPSSSGPYSLQIDVQPKSHHRAHYETEGSRGAVKAMAGGHPVVQLHGYMESEP
LTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTPSHEALHNNNTKILEIPLLPENNMRAI
IDCAGILKLRNSDIELRKGETDIGRKNTRVRMVFRVHINQTAGRTASLQVSSNPIECSQR
SAQELPLVDKRSLETSPAHGGERMLIDGHNFQHDSKVVFVEKAQDGHHLWETEAKVDRDA
SKPTSLLVEIPPYRSQRLSTPVHVNFYVCNGKRKRSQYQRFTYVPASAPTIKTEPRDDFD
APLVCGQRGLSLHPKPYFPPQVAAPMATSDLRPCAVGGPYSVGLAAKPSPPPASSSPSAS
PKLHDLSPPPPPPPFSKCQPSPIPHVSIIQETPGRYQPLGGFYPPSSSSSSSSPPTSQPS
TPTDGPFSPAVCATPAPPGGGGDAGSPGAEQHAKGPARGRGSLQEDGSPPALAVSIKQEP
QELDQMYLDDVNEIIRNDLSSISVHSHA
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccgctgaggaggaggcgtatggctacgcgccaaacgtcagtctgtccctccca
ctgggcaacccgtgtcttccctcccagtaccacagcctccagtccagcgccgccgccgcc
tccgtcgccgagcctctcggctacgacggccgggacgacgcgagcgcggccggctactac
tcgtccccccgcctgaacggcgccccgaccctggagagccctcgcatcgagatcaccgcc
tacggtcagtttcccgaggaggaggcggaggagagcaacctccccgtggccaagcgggtc
aactccatcgtgacgctgaccctcccctgcgccgacagctaccgcgaccccagctgcctg
agcccggccagcagcgtctcgtcccgcagctgccactccgacgcctcctcctacgagtcc
ggcttctcctacaactacgagaactcgccccagaactcgccgtggcagtcgccctccgtg
tcgcccaagggctccaccctcgccctgccgggcgacggctgcacctccggcggctccccg
tcgcgccactcgccctccacctccccgtcgcgcgccggcgtgacggacgacggctggatg
ggtcagcgcggctccaggcccaactcgccgtgcggcgccaagaggaagtacagctttaac
ggcggcggcggggcggcgccgcacaagcactacccgtactcgcccaacgtctccccggga
ctgtccccgcagacctcgcctcgcctcagcatcacggaggagtcctggctgccgaacaac
accaaccagtacaccaactcggccatcctggcggccatcaacgccctgaccacagaggtg
gacctcggggagggaatccccatcaaggcccggaaaaccagccaggagcacggcggcgcc
accactgtcagcctgaagctggagccggggggcgaggagctgagtccggcggagctgtgt
caggacgagcacccctccaaccgcctgccgctgaagaaggagatctactgtggcgggttt
ctggacgtgccgcagcacccttactcctggtccaagccaaagcagtacgtcagcccgtcg
ctgccggctctcgactggcagctgccgtccagctcggggccgtacagcctgcagatcgac
gtgcagcccaagtcccaccaccgagcccactacgagacggagggcagccggggagccgtg
aaagccatggcgggaggacacccggtcgtccagctccacggctacatggagagcgagccg
ctgaccctgcagctgttcatcggcacggcggacgacaggctgctgaggccccacgccttc
taccaggtccaccgcatcaccgggaagaccgtgtccacgccgagccacgaggccctgcac
aacaacaacaccaagatcctggagatcccgctgctgccggagaacaacatgcgggccata
atcgactgcgctgggatcttgaagctgcgcaactcggacatcgagctgaggaaaggggag
acggacatcgggcgcaagaacacgcgcgtgaggatggtgttcagagtccacatcaaccag
acggcgggcaggacggcgtccctgcaggtctcatccaaccccatcgagtgctcccagaga
tcggcccaggagctgccgctggtggacaagcgcagcctggagacgagtcccgcccacggg
ggcgagaggatgctcatcgacggacacaacttccagcacgactccaaggtggtgttcgtg
gaaaaggctcaagacggtcaccacctctgggagactgaggccaaggtcgacagagacgcc
tcaaagcctacttcactgctcgttgaaatccctccctatcggagccaaagactctccact
cctgttcacgtgaacttctacgtctgcaacggcaagaggaaaagaagccagtaccagcgc
ttcacctacgtccccgccagcgccccgacgataaagacggagccacgcgacgacttcgac
gcccctctggtgtgcggccagcgcggcctgtccctgcacccgaagccgtacttcccccct
caggtcgcggccccgatggcgacctccgacctcaggccgtgcgcggtgggcgggccctac
tcggtcggcctcgcggctaagccctccccgccgccggcctcgtcctctccgagcgccagc
cccaaactgcacgacctgtcgcccccgccgccgccgccgcccttctccaagtgccagccg
tccccgatccctcacgtgtccatcatccaggagacgcccgggcgctaccagccgctcggc
ggcttctacccgcccagcagctcctcctcctcgtcctccccaccgacctcgcagccctcc
acgccgacggacggccctttctcgccggccgtctgcgcgacgccggccccgccgggcggc
ggcggcgacgccggcagcccgggagccgagcagcacgccaaggggccggcgagggggcgg
ggctcccttcaggaggacggcagcccgccggcgctggctgtcagcatcaaacaagagccg
caggagctggaccagatgtacctcgatgacgtcaatgagatcatcaggaacgacctgtcg
agcatctccgtccacagccatgcatag
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