Clinocottus analis (woolly sculpin): 137784702
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Entry
137784702 CDS
T10471
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04510
Focal adhesion
cana04512
ECM-receptor interaction
cana04518
Integrin signaling
cana04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137784702 (col9a2)
04518 Integrin signaling
137784702 (col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137784702 (col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
137784702 (col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cana00535
]
137784702 (col9a2)
Proteoglycans [BR:
cana00535
]
Extracellular matrix (ECM) proteoglycans
Others
137784702 (col9a2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
137784702
NCBI-ProteinID:
XP_068431669
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MAALSALLKTWVILQTLCLALAQVRGPPGPQGQAGPPGPSGTPGSDGIDGDKGPPGAPGA
PGLKGEPGEPGSDGAPGENGIDGLIGAKGDRGPLGSMGPKGKPGPSGELGPPGPGLPGLA
GAPGPIGLPGEIGASGPKGTSGSPGPPGLPGPPGKPGPPGKFIGGEEGSADFQCPLNCPA
GAKGPQGLQGVKGHKGRGGVLGEPGSIGKSGPRGELGISGEQGIPGPSGPMGLRGYPGMM
GPKGEAGPRGYKGINGHVGIPGPPGEEGPQGPPGEAGDKGDKGSRGIQGPHGAVGKKGEN
GLPGIDGKDGTPGIPGIKGGPGQAGMPGPPGPQGAAGLPGSPGSKGGAGFKGEPGPRGHI
GMSGSPGPLGEPGLPGEGGMEGVPGPKGDRGQRGPAGPQGVVGKAGIKGERGPIGVPGAQ
GLSGTKGDKGFQGKVGSKGDDGDPGVEGLAGEKGEKGLSGEPGPKGQQGIRGDSGHNGPT
GDPGKPGDLGPSGLPGPRGLNGERGVPGMPGIQGPSGRDTSDQHIIEVVLKMLQERLAAV
AVSAKRAVLGGAGVMGPPGPPGPPGSSGPQGPHGLPGARGMPGMFGGPGQIGNTGLKGKR
GAKGDRGGPGKPHSGAPGPPGIQGPAGVDGVARDGRHGERGPQGSAGEAGHPGKAGSTGL
PGFCEAAMCLAASAYTSPRLQEAGTIKGPNL
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctctcggccttgctgaagacctgggtaatactgcagaccttgtgcctggct
ctggcccaagtgaggggtccacctggacctcagggccaggccggcccgccaggcccctct
ggcactcctgggtcagacggcatcgatggagacaaaggaccacctggagcccccggtgca
ccaggactaaagggagagccaggagagccaggttctgatggagcaccaggagagaacggc
attgatggtttgattggagcaaagggggatcgaggccctttagggagcatggggccgaag
ggtaaacctggaccaagtggcgaacttggacctcctgggcccggccttccaggactggct
ggcgctccagggccaattgggcttccaggtgaaattggagcatctggtccaaagggtacc
tcgggatcccctggacctccaggacttcctggacctcccggcaagccaggcccgccaggg
aagttcattggtggagaagagggaagtgcagacttccagtgccctcttaactgtccagca
ggagctaaaggcccccagggactgcagggagtcaagggacacaaaggacgtggcggtgtt
ctcggagagcccggtagcatcggaaaatcgggtcccaggggagaattgggcatctctgga
gagcagggcatcccaggaccttcgggtccaatgggccttagaggttatccaggaatgatg
ggtcctaaaggggaagcagggcctcgtggttacaagggaatcaacggacatgtaggaata
cctgggcctcctggtgaggagggacctcagggaccacccggagaggcaggagacaaggga
gacaaaggcagccgaggcattcagggcccacacggtgcggttggcaagaagggagagaat
ggtctgccgggtattgatggaaaagatggcacacctggtattccagggatcaagggcggc
cctggccaggctgggatgcccggtcctcctggtcctcagggagcagcgggattgcctggc
agtccagggtcaaaaggtggagctggatttaagggcgagcctggaccgaggggtcacatt
ggcatgtctggttcccccggacctctgggtgagcctggtcttcctggtgagggtggtatg
gaaggagtccctggacccaagggtgacagaggccagcgaggaccagctggaccacagggg
gttgtcggcaaggctggaattaaaggagagagaggaccaatcggtgttccaggcgcccag
ggtctaagcggaactaagggagacaagggcttccaaggaaaagttggctcaaagggagac
gatggtgaccccggtgttgagggattggctggcgagaaaggtgaaaagggtttgtctggt
gagcccgggcctaaaggacagcaaggaattaggggcgactccggacacaacggacccacg
ggagaccccggtaaacccggagacctgggaccatcgggactgcccggtcctcggggactc
aacggagagcgaggagtacccggcatgccgggcattcaggggccatccggacgcgataca
tccgaccagcacattatcgaagtggtgttgaagatgctgcaggagaggctcgccgccgtg
gcggtgagcgccaagagggctgtgctcggtggagcgggtgtgatgggaccaccggggccc
cccggaccgccggggtcatctggacctcaggggccacacggcttacccggtgcccgtggc
atgcctggcatgtttggaggaccgggacagattggaaacactggacttaaaggaaaaaga
ggggcaaagggagacagaggaggtcctggtaaaccccattcaggagcgccaggaccccca
ggaatacaaggtcccgcgggtgtcgacggcgtggctcgggacggtaggcacggcgagaga
gggcctcagggatccgccggagaggcgggtcaccctggcaaggcgggttcgacaggtctc
cccggtttttgcgaggccgcgatgtgtttagccgcgtcggcgtacacatccccgagacta
caggaagcgggaacaatcaagggacccaatctttag
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