Clinocottus analis (woolly sculpin): 137784704
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Entry
137784704 CDS
T10471
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137784704
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
137784704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137784704
NCBI-ProteinID:
XP_068431671
LinkDB
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Position
Unknown
AA seq
990 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKFLHRDQLHNAANANQKEKYEADLKKEIKK
LQRLRDQIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKV
DPAQKEKEEVGVWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKENQDRIEELKKFIE
KHRHHIRMLETILRMLDNDSIQVDSIRKIKDDVEYYLDSSQDPDFEENEFLYDDLDLDDI
PQTLVATSPPGNSQLEDEIFQNSSSTPNSTTSSSPIPPSPATCTTENSEDDKKRGRSTDS
EVGQSPVKNGNPSSSLSSSSSSSSSSSSSSCSSSSVSGLTSSSLVSMAAIAGGGGLGGVS
GVGAHLGSLGGLLSNTSAGSYSNATQQPPHPSAQQQPHQQQQQQQQQQQQQQQQQQQQQQ
AKHLVGSSSSAPISIPMAPGNSHLVSSSSSPPNAITQGLFTSMSQPQALSGSTPTSNSLG
LSLGLSLGKGGMSGGMSLSGGMSGGMSGSPMSGSLGLSGMPASLSNMASLLSGSTPAPYA
QAASSGAIGSGLPGSLGGIGINPTTTNSSAGSIGSGSITVGGPTSSTGGLLGPAPGLPGV
GSGILSLSSGQSGMQMQGSSLMSLSPVGGLAPGSGVGVIGSNGGSSGSGGGGGGVLGGGG
MSLSIRPSSQQKQNGSTSYSAVLADSTTDSGLTGASQSQSIPPMSLTSAANQPKDTGSSL
LGSICLSSSSPSAAFYSEAKAVSGGGGSLLNGPLSYSQSSDGIKPQEPLSSLKSMAERAA
LSSGMEGDLPSLHLTPVSVSRLSSDIFPSSTVATSGPPSAPQLSLSEVSIPPSLGVCPLG
PVPLSKDQLYQQAMEEAAWTHMPHPSDSERIRQYLMRNPCPTLPFHNQVPPPHSDTVEFY
QRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGT
YIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaggaaactccaaggtgaaatagatcgatgtctgaaaaaagtagcggaa
ggagttgaacagtttgaagacatttggcaaaagtttctccacagagatcaacttcacaat
gcagccaacgcgaatcagaaggagaaatatgaagcagacctcaagaaagagattaaaaag
ctacagcgtcttcgagaccagatcaagacgtgggtggcatccaacgagatcaaagacaaa
aggcagctagtcgagaaccgcaaactcatagaaacgcaaatggagcggttcaaaatagtg
gagcgagaaaccaagacgaaagcgtactcaaaagaagggctgggtctggcccagaaggtg
gacccggcccagaaggagaaggaggaggtcggcgtgtggctgacgaatacgatagacacg
ttgaacatgcaggtggaccagttcgagagcgaagtggagtctctttcggtccagacgaga
aaaaagaaaggagacaaagagaaccaggaccggatcgaggagctgaagaagttcatcgaa
aagcatcggcaccacatccggatgctggagaccatcctgaggatgctggacaacgactcc
atccaggtggactccatcaggaagatcaaggacgacgtggagtattacctcgactcgtcg
caggatccggactttgaagagaacgagtttctgtacgacgacctggacctggacgacatc
cctcagacgctggtcgccacctccccgccggggaactcgcaactggaggacgagatcttc
cagaactcgagcagcacgccgaactccaccacgtcgtcttcacccatcccaccgtcgcct
gccacctgcactacggagaactcggaagacgacaagaagagaggacgttcaacggacagc
gaagtcggtcagtcgcccgtgaagaacggaaacccctcttcctcgttatcctcgtcctcc
tcctcttcctcgtcctcgtcctcctcctcgtgctcctcctcctccgtctccggtctgacc
tcgtcctcgctcgtctcgatggcggccatcgccggaggaggcggcctcggcggcgtctcc
ggggtcggcgctcacctcggcagcttggggggtctcctctccaacacgtccgccggcagc
tacagcaacgccacccagcagccgccgcacccgtcggcgcagcagcagccgcatcagcag
cagcaacagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcaacaacag
gccaaacacttagtcggctcctcctcctcggctcccatctccatccccatggcgcccggc
aacagccacctggtctcctcttcctcctccccgcccaacgccatcacacaggggctcttc
acgtcgatgtcccagcctcaggctctgtcggggtccacgccgacctccaacagcctcggc
ctcagcctggggctgtcgctggggaaaggcggcatgtccggcggcatgtctctgtccggc
ggcatgtcaggcggcatgtccggcagcccgatgtccgggagccttggcctgtcggggatg
ccggcgtccctgagcaacatggcgagcctcctgtccggctctaccccggcgccctacgct
caggcggcgtcctcgggggcgatcggctccggcctgccgggttcgctgggcggcatcggc
atcaacccgacgacgaccaacagctcggcgggctccatcggcagcgggagcatcacggtt
ggcgggccgacgtcctcgaccggcggcctgctgggcccggcgccgggtctgcccggtgtc
ggctccgggatcctgagtttgagttccggccagtccgggatgcagatgcagggctcctcc
ctcatgtcgctgagcccggtcgggggtctggcgcccggtagcggcgtgggagtcatcggg
agcaacggaggcagctcagggtcgggaggcggcggcggaggcgttctgggaggcggcggc
atgtcgctctccatcaggccgtcgagccagcagaagcagaacggtagcactagttacagc
gctgtgttagcagacagcacaacagactccggcctcaccggtgccagccaatcacaaagc
atcccacccatgtccttgacctccgcggccaatcagcctaaggacactggttccagttta
ctgggctccatttgtttgtcgtccagctccccgtcggcagccttctacagcgaggccaag
gcggtgagcggcggcggcggcagcctgctgaacgggccgctgtcgtactcgcagtcctcc
gacggcatcaagccccaggagcctctgagcagcctgaagtccatggccgagcgagcagca
ctcagctcagggatggagggagacctgccctccttgcacctcaccccagtctccgtctcc
cgcctctcctcggacatcttccccagcagcactgtggccacctcgggcccgccgtcggcc
ccccagctctcgctgtcggaggtcagcatccccccgtcactgggggtctgcccgctgggg
ccggtccccctgtccaaagaccagctgtaccaacaggccatggaggaggcggcgtggaca
cacatgccacacccgtccgactccgagagaatcaggcagtacctgatgaggaacccctgc
cccactctgcctttccacaaccaggtgccgccgcctcactctgacactgtagagttttac
cagaggctttccacggaaaccctcttcttcatcttttactacctggagggcactaaggcc
cagtatctggcagccaaagccctgaagaagcagtcgtggaggttccacacaaagtacatg
atgtggtttcagaggcacgaagaacccaagaccatcacggacgagtttgagcagggaacc
tacatttactttgactacgagaaatggggccagcggaagaaggaaggcttcacgttcgag
taccggtacctcgaagaccgagacctccagtga
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