Clinocottus analis (woolly sculpin): 137784798 Help Entry 137784798         CDS       T10471                                  Symbol col11a2 Name (RefSeq) collagen alpha-2(XI) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism cana  Clinocottus analis (woolly sculpin) Pathway cana04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cana00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     137784798 (col11a2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cana00536]     137784798 (col11a2) Glycosaminoglycan binding proteins [BR:cana00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    137784798 (col11a2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_1 Laminin_G_3 Motif Other DBs NCBI-GeneID:  137784798 NCBI-ProteinID:  XP_068431835 LinkDB All DBs Position Unknown AA seq 1669 aa AA seqDB search MALVKAQAGLQAFLLSVYSEQGVQQLGIEMGRSPVFLYEDQNGKPAPEDYPLFRGVNLAD GKWHRIAISVSKKNVTLLLDCKKKMTRPLPRGNNAQIDTNGITVFGARLLDEEVFQGDIQ QLLIASNSQAAYDFCEHYSPDCDSPLPKTQAQDPNTYDVDTEYSEAGGAPTETDYYYEET APEGEVIGQEEIPEQPQVETVLVGEEVDAAKAGGVGEEAFTEEYVTGDVGLKEYDYSYRD YSEPMLETGEVDANMGPALSAVTDEGGAAVRGQKGEKGDPAVLEPGMLIEGPPGPEGAAG PTGPPGSSGPPGSVGDPGERGPSGRAGLPGADGVPGPPGTSVMLPFRFGQSGGDKGPSVS AQEAQAAAILSQARMALKGPPGPMGFTGRSGPMGNPGSNGLRGEGGDPGPQGSRGPQGTM GPPGKAGRRGRAGADGARGMPGESGTKGDRGFDGLPGLPGDKGHRGDSGPLGPPGSQGED GERGDDGEVGPRGLPGESGPRGMLGPKGPPGISGPPGVRGNDGPHGPKGNLGPQGEPGPP GQQGTPGTQGMAGPQGALGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPSGTKGNQGPN GPQGAIGYPGPRGVKGGQGIRGLKGHKGEKGEDGFPGIKGDFGVKGERGELGVSGPRGED GPEGPKGRVGPPGELGPLGLLGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGSNGEKGTR GLGGKSGPRGQRGPTGPRGQRGPRGSTGKSGAKGTSGSDGPHGPLGERGLPGPQGANGFP GPKGPPGPPGKDGLPGHPGQRGEVGFQGKMGPPGPPGVVGPQGSSGETGPMGERGHPGPS GPPGEQGLSGPSGKEGTKGDPGPSGGPGKDGPPGLRGFPGERGLPGTPGGGGLKGSEGPA GPPGPAGSPGERGQAGTAGPVGPPGRPGPQGPPGPSGEKGVLGEKGPIGPAGRDGVQGAV GLPGPAGSPGVSGEDGDKGEVGEHGQKGGKGGKGEHGPPGPPGPMGPVGQPGPAGADGEL GPRGQQGPFGAKGDEGTRGFPGAPGPIGLQGLPGPPGEKGETGDVGPLGPPGPPGPRGPA GPSGADGPQGPPGGLGNPGPIGEKGEPGEGGPPGILGEPGKKGPRGERGEKGESGQPGTA GPAGGRGGPGDDGPKGNPGPVGFPGDPGPHGEVGPRGLDGAKGERGEDGEQGESGSPGPS GENGPPGPLGKRGPAGTRGPEGRQGEKGTKGDSGAVGAPGKTGPVGLQGQPGKPGTEGLR GLPGSVGEQGSPGLAGQKGPPGPIGPPGLPGLRGDPGSKGEKGHPGLIGLIGPPGEQGEK GDRGLPGPQGSLGSKGESGMSGGTGPLGPAGPPGLPGAQGVKGAKGSSGGSGPKGEKGVQ GPAGPPGPPGEVIQPLPIQRSPKSKRSIDGSQLLPDTNSDMPASDAAGAQFLTGTEGMEE IFGSLNSLRQEIETMRFPLGTEDSPARTCQDLHLSKPELKDGEYWIDPNQGCSRDSFKVF CNFTNGAETCLYPSKNTNTVKMSSWDGETPGSWYSQFTAGSKFSYVDATGEPVGVVQLGF LRLLSVQARQNLTYHCHRSVAWADRSAKNNYDRALHLQGANDEKLSYETNPYVKALVDGC SYRKGFDRTVLEINTPQVEHLPLRDIKVSDFGESNQQFGFEVGPVCFQG NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atggctctggtgaaggcccaggccggcctccaggccttcctcctctccgtctacagcgag cagggcgtccagcagctgggcatcgaaatgggacgctcccccgtcttcctgtacgaggac cagaacggcaagccggcgcccgaggactacccgctgttcagaggcgtcaacctggctgat ggcaagtggcatcgcatcgccatctccgtctccaagaaaaatgtgactctgctgctggac tgcaagaagaagatgacgcgcccgctgccgcgcggcaacaacgcccagatcgacaccaac ggcatcaccgtgttcggggcccggctgctcgacgaggaggttttccagggagacatccag caactgctgatcgcctccaactcccaggctgcctacgacttctgtgaacactacagcccg gactgcgactccccgctgcccaagacccaggctcaggaccccaacacatacgacgtagac actgaatattcggaggctggcggcgccccgacagagaccgattattactatgaggagacg gcgccagagggtgaggtgatcggacaagaagagatccctgagcagccccaggtggagaca gtgttggtgggagaggaggtagatgccgccaaggcaggcggtgtgggcgaggaggccttc accgaggagtatgtgactggggacgtgggccttaaggagtacgactattcctacagggac tacagtgagccaatgctggagaccggggaggtcgatgccaacatgggccccgccctgtcc gctgtgacggacgagggaggcgccgccgtcagaggccagaagggagagaaaggagacccg gctgtcttggagcctggaatgctgattgaaggacctccaggacctgagggagctgctggc cccactggcccccccggctcctctggaccccctggctctgtgggagaccccggggagagg ggcccttctggtcgggctggtctgcctggagctgatggagtccccggacctccaggaacc tccgtcatgctgcctttccgtttcggtcagagcggcggcgataaggggccgtcggtttct gcacaggaagcccaggcggcggctatcttgtctcaggccaggatggctctgaaaggacct cctggaccgatgggcttcaccgggcgctccggaccaatgggaaatccaggtagcaatggt ctgaggggagagggtggagaccccggtcctcagggctccaggggcccccagggtaccatg ggtcctccaggcaaagcaggaagacgaggccgtgctggtgctgatggcgccaggggcatg ccgggagagtctggaacaaagggcgaccgtggtttcgacggccttcccggtttacccggc gacaaaggacacagaggtgactcgggcccgttgggacccccagggagtcaaggggaggac ggagagcggggagacgatggagaagttggacccaggggtctcccaggtgaatcaggacct cgtggtatgctcggacccaaaggtcctcctggaatctctggacctcctggtgtgagaggg aacgacgggcctcacggtcccaaaggaaacctgggtccccaaggagagcctggacctcca ggtcagcagggaacaccgggaactcaggggatggccggacctcaaggagccctcggaccc ccgggagagaaaggtcccacaggaaaaccaggcctgccaggaatgccaggagccgacggc cctccaggtcacccaggaaaggaggggccttctggcaccaaaggaaaccagggtcccaac ggtcctcagggtgctatcggctatcctggccctcgcggcgtcaagggaggtcaaggaatc cgtggactgaagggccacaaaggagagaagggagaagatggtttccctggaattaaggga gactttggtgtcaagggcgagaggggcgagctcggagtgtcggggcccagaggagaggac ggtccggaggggccaaagggtcgcgtcggaccccccggtgagctcggaccgctcggactg cttggagagaagggtaaactcggtgtacctggacttcctggatatcccggcagacaagga cccaagggatctcttggattcccaggattccccggctcaaacggcgagaagggaacgagg ggtctcgggggcaaatccggaccaagaggacaaagaggaccaacgggccccagagggcag agaggaccgaggggctcgacggggaaatctggagcaaagggaacttcgggaagtgacggc cctcacggtcctcttggagagaggggattgcccggacctcagggagccaatggcttccct ggaccaaagggacctccgggaccaccaggaaaggacggcctgcccggacaccctgggcag agaggagaagttggtttccaaggtaaaatgggtccacctggacctcccggagtcgttgga cctcagggttcatcaggagagaccggcccgatgggcgagcgtggccaccccggaccctcg ggtccaccaggagagcaggggctttccggtccctctgggaaggagggcaccaagggagac cccggaccctccggaggccccggcaaagacggacccccgggactgagaggcttccctggg gagagaggactccctggaacccctggaggcggaggactgaagggaagtgaaggacctgcc ggacctcctggacccgccgggtctcctggtgagagggggcaagctggtaccgctggacct gtcggacctcctggcagaccgggccctcaggggcctcccggaccatccggagagaaggga gttctcggcgagaaaggtcccatcggcccggccggtcgcgatggcgtgcagggcgccgtg ggtctgcccggccccgccgggtcacccggagtatccggagaggacggagacaagggtgag gtcggagagcacgggcagaagggcggcaagggaggaaaaggagaacacggtcctcctggt ccacccgggccgatgggtcccgtcggtcagcccggtcccgctggtgctgacggagagctt ggaccaaggggccagcaggggccatttggagccaaaggtgacgaaggaaccagaggattc ccaggagccccaggacccatcggactgcagggactgccaggaccgccaggtgagaaggga gagaccggagacgtcggacctctgggtcctccaggaccccctggacctcgtggccccgcc ggacccagcggcgctgacggtcctcaaggtcctcccggtggtttgggtaatcctggacct atcggagagaagggagagcctggcgaaggcggaccacctgggatcctgggggagccggga aagaagggtcctcgcggcgagcgcggcgagaagggagaatccggacaacctggaaccgcc ggacccgccggaggacgaggaggacccggagacgacggacccaaaggaaaccctggtcct gttggtttccctggtgatcctggtccccacggggaggtcggacccagaggtctagatggc gccaagggagagagaggagaagacggcgaacaaggagaatccggctcgcccggaccttct ggcgagaacggacctcccggccccttaggaaagaggggccccgctggaacaagaggacca gagggacgtcagggagagaagggaaccaagggagactccggcgctgtcggtgctccggga aagaccggccccgtcgggctccagggccaaccaggaaaaccgggaacagaaggcctcaga ggactcccgggatcagtgggtgaacaaggatctccaggacttgccggacagaaaggacca cctggacccatcgggcctcctggtttgccgggtctgcgtggagaccctggatctaaggga gagaagggacatccgggtctcatcggtctcatcgggcccccgggagagcagggggagaag ggagaccgagggctgcccgggcctcagggatccctcggatccaaaggagagtctggaatg tccggaggcaccggacccctcggtcccgccggtcctcctggtctgcctggtgctcaaggt gtcaagggtgctaagggctcttctggtggatctggtccaaagggagagaagggcgtccaa ggccccgccggacctcccggcccaccgggcgaggtcatccagcccctgcccatccagagg agtcccaagtccaagcgctccatcgacggcagccagctgctgcccgacaccaactccgac atgccggcgtccgacgccgccggcgcccagttcctgacgggcaccgaaggcatggaggag atcttcggctcgctcaactcgctgcggcaggagatcgagaccatgcgcttccctctcggc accgaggacagcccggcccgcacctgccaagacctgcacctcagcaagccggagctcaag gacggtgaatactggatcgaccccaaccagggctgctccagagattccttcaaggtcttc tgtaatttcaccaacggagcagaaacctgcctgtatcccagcaagaacaccaacacggtg aagatgagttcctgggacggcgagactccaggatcctggtacagccagttcaccgccggt agcaagttctcctacgtggacgccactggtgagcccgtgggcgtggtccagctgggcttc ctgcgtctcctcagcgtccaggcccgccagaacctcacctaccactgccaccgctcggtg gcctgggccgaccgcagcgccaagaacaactacgaccgggcgctgcacctccagggcgcc aacgacgagaagctgagctacgagaccaacccttacgtcaaggccctggtcgacggctgc tcttatcgtaagggctttgacaggacagtcctggagatcaacacgccacaggtggagcat ctgcctctgcgggatatcaaggtgtcagactttggggagagcaaccagcagtttggcttt gaagtgggacctgtttgtttccaaggctga

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