Clinocottus analis (woolly sculpin): 137784865
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Entry
137784865 CDS
T10471
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cana01009
]
137784865 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cana03021
]
137784865 (ctdp1)
Enzymes [BR:
cana01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
137784865 (ctdp1)
Protein phosphatases and associated proteins [BR:
cana01009
]
HAD phosphatases
Fcp/Scp phosphatases
137784865 (ctdp1)
Transcription machinery [BR:
cana03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
137784865 (ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
PTCB-BRCT
BRCT
Biotin_lipoyl
Nairovirus_Gn
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
137784865
NCBI-ProteinID:
XP_068431921
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MEDPSAGGVDGGGATAAAAQGPVVQVAEIRWPMGALPLRLLEWKVKPGAHVNLDSVLALC
APIPQEKGAEAATRLPERKVKSDRAGVVKELCCQLGQVIPPGGVVVRIEECSHPIVMKGL
CAECGQDLTQLQGTNGNQQTPISTATVSMVHSVPELMVSSEQAEELGREDQQRLHRNKKL
VLMVDLDQTLIHTTEQHCQRMSNKGIFHFQLGRGEPMLHTRLRPHCKAFLEKIAKLYELH
VFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVSIIDD
REDVWKFAPNLITVKKYIYFQGTGDINAPPGSREAQMAKKGGPSGRPAESTEPVGTSNAD
EQINGPKKRAKDHGLSGKEESTTPPSTQGVPANERTHPSWVVEDESGQGKKTEAKAETGE
EESALAQVLRETQVGDGTNAKEDDSNRTLVTREAPDRSNSSAPSHESNNLDFDLSSDSDN
DSITDKPPTSESDAEAKSSQAKKSGQEVVSPVEGDSRGRSEGETSADAAEPSGVLLPDPE
LGNGCSDRREPETESQNSEQSGVTMGEELLDQSMEEEEEDDDDEVDIDQDDHLIYLEEVL
ERIHAEYYARYEAYLRKEAPETPDIRKISPELKSKALDGTTIVFSGLYPTNYPMERTREY
YHAKAMGAKIGKNLVFNSQDACRTTHLIAARAGTEKVRQAQGCKHLHVVNPDWLWSCLER
WERVEEQLYPLKEDCSKMPRSNSPAAFPDMQGSLQTHVFQPAPIHHRAPPPAPEVRTYDP
VTGKLIRRGPQVPRTPSYLQAPGSLLLSDHGEQSCLRGTSKGQLDDAAGSSQDDEQPGPS
RRERQPSMSETMPLYTLCKADLESMDKEVDDMLGEESDNESECRGKEKPGNEEVEDEGQR
RSGAGQIAAAAARGGELGPQAVSVEERMQTPSSEDGVTRGHKRKHDEAKEEEDDKEKEEE
EAAEESADESSKDSNEEEEGSSSEADEMAAALELELNDFM
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggaggatccgtctgcaggaggtgtcgatggcggtggagcaacagcagcagcggcgcag
ggccccgtggttcaggtggcggaaatccgctggccgatgggggctcttcctcttcggctc
ctcgagtggaaagtcaaacccggggctcacgtgaacctagactcggtgctcgcgctctgc
gcccccataccccaagagaagggggcagaggcggccaccaggctgcctgagaggaaggtg
aaatcggaccgtgctggagtcgtcaaggagctgtgctgtcaacttggccaggtcatacct
cccggaggcgtcgttgtcagaatagaagaatgcagccatccaatagtaatgaagggttta
tgtgcagaatgtggccaggacctgactcagctgcagggcacaaatgggaaccagcaaact
cccatctccacagcaaccgtctccatggtgcacagtgtccccgagctgatggtcagctca
gagcaagcagaagagctgggcagagaagaccagcagcgactccacaggaacaagaagctg
gtcctgatggtggatctggaccagacgttgatccacaccactgaacagcactgccagcgt
atgtccaataagggtattttccacttccagctcgggcgaggagagccgatgctccacacg
cgactgcgcccacactgcaaggccttcctggagaaaattgccaaactctacgagttgcac
gtcttcacgttcgggagccgcctctatgcacacaccattgctggttttctggatcccgaa
aagaagcttttctcacatcggatcctttccagagacgaatgcatcgacccgttttccaag
acggggaatctgaggaatcttttcccgtgtggcgactccatggtctccataatcgacgac
cgagaggacgtgtggaaatttgcgccgaacctcatcactgtgaagaaatacatctacttc
cagggcacaggggacatcaacgctccccccggatcacgggaagctcagatggcaaagaaa
ggaggcccgtcaggtcggccagcagagagcacagaaccagttgggacgtcgaacgccgac
gagcaaatcaatggccccaagaaaagggcgaaagaccacggcctttctggaaaggaagag
tccacgacccctccgtctactcagggagtaccagcgaatgaacggacacacccctcatgg
gttgtggaggatgaatcgggacaaggtaaaaagactgaggctaaggcggagactggggag
gaggagtctgcattggcgcaggtgttgagggaaactcaggtgggcgacggaacaaatgct
aaggaagacgatagcaacaggacactggtgacgcgagaggcgccggacaggtcaaactcc
tcggcaccgagccacgagtccaataacttggactttgatctttctagtgacagtgacaat
gactccattacggataagcctcccacatcagagagtgatgccgaagccaagtcgagccag
gcgaagaaatctgggcaggaagtagtctcgcctgtcgaaggggacagtagaggccggagc
gaaggagaaaccagcgccgacgcggcagaaccgtcaggggttctcctcccggaccccgag
ctggggaacggctgctcggaccggagggagccggaaacggagtcgcagaacagcgaacaa
tcgggcgtgaccatgggggaggagctgctggaccagagcatggaggaggaggaagaggac
gacgacgacgaagttgatatcgaccaggacgaccacctgatctacctggaggaggtgcta
gaaaggatccacgccgagtactacgcgcggtacgaggcctacctgaggaaggaggcgccc
gaaacgccggacatccgcaagatttccccggagctgaagagcaaggcgctggacggcacg
acgatagtgttcagcggcctgtacccgaccaactaccccatggagaggacccgcgagtac
taccacgccaaagcgatgggggccaagattggcaagaatctggtgtttaactcccaagat
gcctgtcggacgacacatctcatcgcagcaagagccggcaccgagaaggtccgtcaggca
caaggctgcaagcacctccatgtggtcaaccccgactggctgtggagctgtctggagcgc
tgggagagggtggaggagcagctgtacccgctaaaggaggactgctccaagatgccacgg
agcaacagtccggcggcgttcccggacatgcagggttccctgcagacgcacgtcttccag
ccggctcccatccaccacagagctccgcctccggcccccgaggtccgaacctacgacccc
gtcacggggaagctgatccgcaggggcccccaggtgccacggacgccgtcctacctccag
gcaccggggtccttgttgctctctgatcacggagagcagtcttgtctcaggggaacgtcg
aagggccagctggacgacgcggcggggtccagccaagacgacgagcagccggggccgtct
cgtcgggaacgacagccgagcatgtcggaaactatgcctctgtacacgctttgcaaggcg
gatctggagagcatggacaaggaggtggacgacatgttgggcgaggagagtgacaacgaa
agtgagtgccgagggaaggagaagcccggtaatgaggaggtggaggatgaagggcagcgg
cggtccggagctggacagatcgccgccgcagcagcacgaggaggagagctcggccctcag
gcggtgagcgtggaggagaggatgcagacgccttccagtgaggacggcgtgacaaggggc
cacaaacgtaagcacgacgaagctaaggaggaagaggacgacaaggagaaggaggaggag
gaggcggcggaggaatctgctgacgagtcatccaaagactccaacgaggaagaagaaggg
agcagctcggaggcggacgagatggccgccgccttggagttggagctcaatgacttcatg
tga
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