Clinocottus analis (woolly sculpin): 137784876
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Entry
137784876 CDS
T10471
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cana03000
]
137784876 (irx1b)
Transcription factors [BR:
cana03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
137784876 (irx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PAT1
Motif
Other DBs
NCBI-GeneID:
137784876
NCBI-ProteinID:
XP_068431939
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MSFPQLGYPQFLSASHEVYGGERPASAREGGTEGGLSSSATAAAVGSMLGMYGSPWAAHN
YSAFLPYSGAADLALISQMGSQYELKDSPGSHPASLPVHAAQGFYPYGQYPYGDPSRAKT
ATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKVTW
GRSAEDRDGRIFSSDNEDDVKNGSDDEEEEEEIDLETVDIERPEEGEQQPGAGEQPGSGK
GEGEGREGEAEGEGEEEEGEAGLADREQASEPKSSESSRTLSVEALRGVEAALSLNRSPV
VVKLAVDRSPSRQECQRPPQSKPKIWSLAETATAPDSAHRASAAAHAHTHHHHHQHHQQQ
QQQQQQQHPALASAGHPALLPGHGIYTCQIGKLHNWANAAFLNANSLLNMRSLLGGAPAG
HLPLHGAVPVARHDARTTTAAAAAAGPEASGTEEDSDVESSGSFSPKRDDEESDHRPDSR
KSPFQLITDRPHHGTAPQRVVTTTL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccctcagctggggtacccccagttcctcagcgcctcccacgaggtgtacggg
ggcgagcggccggcctctgcccgggaaggaggcactgaaggcggcttgagctcgtccgct
accgccgcggctgtcggctccatgctggggatgtacggaagcccgtgggcggctcacaac
tacagtgcctttctgccgtacagcggagccgcagacctcgccctcatctcccagatgggc
tcccagtacgagctgaaggacagcccgggctcccaccccgcctctctgccggtccacgcc
gctcaaggcttctacccgtacggccagtacccgtacggggacccgtcgagggccaagacg
gccacgcgggagaccaccagcaccctgaaggcctggctgcaggagcaccagaagaacccg
taccccaccaagggagagaagatcatgctggccatcatcacccggatgacactcacacag
gtgtccacgtggttcgcgaacgcgcgcagacgcctcaagaaggagaacaaggtcacctgg
ggccgcagcgccgaggaccgggacggccgcatcttcagcagcgacaacgaggacgacgtc
aagaacggcagcgacgacgaagaggaggaggaggagatcgatttggaaactgtcgatatc
gagaggcccgaggagggggagcagcagcccggagccggggagcagccgggctccgggaag
ggagagggcgaaggacgggagggagaggctgagggagagggagaggaagaggagggggag
gccggcctggccgaccgagagcaggcctcggagccgaagagctccgagagcagcaggacg
ctttccgtggaggccctgcggggcgtggaggcggcgctttccctcaacagatcgccggtt
gttgtcaaactcgcagtggatcgttcccccagcagacaggagtgccagaggccgccgcag
agcaaacccaaaatctggtccctggctgagaccgccacggccccggacagcgctcacaga
gcttccgccgcggcccacgcgcacacgcaccaccaccaccaccaacaccaccaacagcag
cagcagcagcagcagcagcagcacccggctttggcctccgccggccacccggccttgctc
ccgggtcatgggatttacacatgccagattggcaaactgcacaactgggccaacgcggct
tttctgaacgccaactctcttttgaacatgcgctcgctcctcggaggggcgccggccgga
cacctgccgctccacggcgcggtgccggtggcgcgtcacgacgcacggacgacgacggcg
gcggcggcggcggcggggcccgaagcctcggggacggaggaggacagcgacgtggagtcg
tcggggagcttcagtccaaaaagagatgacgaggagagcgaccacaggcccgattcccgg
aagtccccattccagctgatcaccgacagacctcaccacgggacagcgccacagcgagtt
gtgacaacgacattatga
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