Clinocottus analis (woolly sculpin): 137784918
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Entry
137784918 CDS
T10471
Symbol
smarcc1b
Name
(RefSeq) SWI/SNF complex subunit SMARCC1b
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137784918 (smarcc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cana03021
]
137784918 (smarcc1b)
03036 Chromosome and associated proteins [BR:
cana03036
]
137784918 (smarcc1b)
Transcription machinery [BR:
cana03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137784918 (smarcc1b)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137784918 (smarcc1b)
PBAF complex
137784918 (smarcc1b)
GBAF(ncBAF) complex
137784918 (smarcc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
SWIRM-assoc_3
Myb_DNA-bind_6
SpeFL
DUF919
Motif
Other DBs
NCBI-GeneID:
137784918
NCBI-ProteinID:
XP_068432000
LinkDB
All DBs
Position
Unknown
AA seq
955 aa
AA seq
DB search
MATSSGGINLGIPGTSHTSSGTSAHRKKDSSPSARFWESPDTLAQLEVVRQWIGKHYKKY
VLVDAPSCQALAAVTLQLLQFQEDAFGRQATSPALTKLPAQCFLDLRPGGGLCHILGTAY
KFKAEQGWRRFDLQNPSRTERNVEMFGAIERALIQNNCLSLPVVYVDSTLDQELASRLTN
IITKHQGTLTEDRTLASHHIYSKLASTEEDDWMRPVMRKDKHVLVHWGMHPDSYDSWLSS
SDVEREVEEPPHSEKPWRVHAGWVLDTDVFNEWMNEEDYCVDERNVPIIFRQRIHLKDDQ
DSKSTPSKKRRRSPSPPSSEGRKKGKKGRRRGQQGEDPEEDLTKDMEDPTPVPNMEEVVI
PKNVNLKKDSENTPVKGGTMTDLDELEDDFPGRDDDEGRGEIPRLTEGEDNITEQTHHII
IPSYTSWFNYNRIHAIEKRALPEFFNGKNKSKSPEIFLAYRNFMIDTYRLNPQEYLSSTS
CRRNLTGDVCAVIRVHAFLEQWGLINYQVDAESRPLPMGPPPTPHFNVLADTPSGLAPLQ
HKPLQVSASQHMLFFPEKSKEKPSECQNFGLRSDIYTKKHPKTKGTNAGREWTEQETLLL
LEALEVYRDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSASLGPLAYQPVPFSQS
ENPVMSTVAFLASVVDPRVASSAAKAALEEFSKVQEESMVKVSETSNQPEKTESMDAEII
ETNSISHQVSLMADGLTVEPIQAKVEGELVKRENVENILAEERDERGDDDESVGRGDVDE
ARVMELDLVEGRVATAAAAALASAATKAKHLAAVEERKVKSLVALLVETQMKKLEIKLRH
FEELETIMDREKEALEQQRQQLLTERQTFHTEQLKQAEIKVRQQREQQGQPGFTMQHSAL
PTPTGQPMSNRMMPAGGNAQVMAPRHPGAPNGMYPSSQPEGIAPAQPGPPAATHS
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggctacatcgtccggaggaataaacctcggcatacccgggacaagccacaccagctcc
ggaacatccgcacatcggaaaaaagacagcagcccgtccgctaggttctgggagagtccg
gatactttagcccagctggaggtggtgcgacagtggatcgggaagcactacaaaaagtac
gtgctggtggacgctccgtcgtgtcaggctctggctgcagtgaccctgcagcttctccag
ttccaggaggatgctttcggcagacaggcgaccagtcctgctcttaccaaactgcccgca
cagtgcttcctggacctgcggccagggggtggactctgccacattcttggcactgcctac
aagtttaaagcagagcaaggctggcggaggtttgacttgcagaatccatcaagaactgaa
agaaatgttgagatgtttggtgctattgaaagagccctgatccagaacaactgcctgtca
ctgcctgtggtatacgtggactctacactggatcaggagttggctagtagacttacgaat
attatcaccaaacaccagggaactctcactgaggaccgcacgctcgccagtcaccacatc
tactccaaacttgcttctacagaggaagatgattggatgcgtcctgtaatgcggaaagac
aaacatgtcttggtacactggggcatgcaccctgacagttatgacagttggctgtcctca
agcgatgttgaaagagaggttgaagagccaccacattcagaaaagccgtggcgggtccat
gctggctgggttctggacacagatgttttcaacgagtggatgaacgaagaagactattgt
gtggatgagaggaatgtaccaatcattttccgtcagagaattcacctcaaagacgaccag
gactccaaatccaccccctccaaaaagagaagacgctccccttctcctccctcctctgaa
ggcagaaagaaaggaaagaaggggagaaggcgcggacaacagggggaagatccagaagag
gacttgaccaaagacatggaggaccctacccctgttcccaacatggaggaggttgtaata
cccaagaatgtcaacctgaagaaggacagtgagaatactcctgtcaaaggagggactatg
actgacctggatgaactggaggatgatttcccaggaagggatgatgacgaaggcagaggg
gagattcctcgcctgacagagggagaggacaacatcacagaacaaacccatcatatcata
ataccaagctacacgtcttggttcaattacaacagaattcatgcaatagagaaacgtgca
ttgcctgaattcttcaatggaaagaataagtccaaatcaccagaaatcttcctggcatac
cgtaacttcatgatagacacataccggctcaacccccaggaatacctaagttcaacgtcc
tgcagacgcaacctcactggagacgtctgcgctgtcattagggttcatgcatttttggag
cagtggggtttgattaactaccaggtggatgcagaaagcaggcccctccccatgggaccc
ccacccacccctcatttcaacgtgctggccgacacaccgtccgggctggcccccctacaa
cacaaaccactgcaggtgtcggcctcgcagcacatgttatttttcccagagaagagcaaa
gagaagccttcggaatgccagaactttggtctgcgctccgacatctacaccaagaaacac
cctaagactaaaggtacaaatgcaggaagggaatggacagagcaagagacacttttgcta
ttagaggccttagaggtctacagagacgactggaacaaagtatccgagcatgttggctcc
agaacacaggatgagtgtatcctccacttccttcgtctgccaatagaagacccttatcta
gaagactcttcggcctcccttggcccactggcataccagcctgtgcctttcagtcaatca
gagaaccccgtcatgagcactgtggccttcctggcatccgtggtggacccacgagtggct
tcatccgcagctaaggctgcactggaggagttttcaaaagtacaggaggagtcaatggtt
aaagtctctgaaacgtccaaccagccggagaaaacagagtcgatggatgcagagataatt
gaaacaaactccatctcccatcaggtctctttaatggcagatgggctcacggtggaaccc
attcaggccaaagtagagggagaactagttaaaagggaaaatgtcgaaaatatacttgca
gaggagagagatgaaaggggagatgacgacgaaagtgtcggacggggagatgtggatgag
gcaagagtgatggagctggatctggtggagggcagagtcgccacggcagcagcagctgct
ctggcctcagctgcaacaaaggccaagcacttggccgcagtagaagagaggaaggtaaag
tccctggtggctctgctggtggagacacagatgaagaagctggagatcaaactgaggcac
tttgaggagctggagaccatcatggaccgtgagaaagaggctctagagcagcagcggcag
cagctcctgacagagcgacagacgttccacactgagcagctgaaacaggcagagattaag
gttcgccagcagagggagcagcaggggcagccgggattcacgatgcagcattcagcctta
cctactcctacaggccagcccatgtccaaccggatgatgcctgctggcggaaacgcccag
gtgatggcccctcgacaccccggagctcctaatggcatgtacccatcctcgcagcctgag
gggatagcaccagcgcagccgggtcctccggcagccactcacagctaa
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integrated database retrieval system
