Clinocottus analis (woolly sculpin): 137785194
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Entry
137785194 CDS
T10471
Symbol
tap2a
Name
(RefSeq) antigen peptide transporter 2a
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana02010
ABC transporters
cana04145
Phagosome
cana05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
137785194 (tap2a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
137785194 (tap2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
137785194 (tap2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cana02000
]
137785194 (tap2a)
Enzymes [BR:
cana01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
137785194 (tap2a)
Transporters [BR:
cana02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
137785194 (tap2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
MFS_1
AAA_30
RsgA_GTPase
AAA_16
AAA_29
AAA_15
Zeta_toxin
Rad17
Motif
Other DBs
NCBI-GeneID:
137785194
NCBI-ProteinID:
XP_068432397
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MAGSTAALSRRAAALVLAVFVDLCLFYAAGLVVTTRGESGHAARLWALAAVRCSVLTAVT
RLLLGDLHPVLMRVIAAHSLLPAVFQTGTDALRHEDTECGSSADVRCWLMGAGAALAAAL
FWEFTFPDADDAAGGQEKKQKQKARVLFVRVLRLFRPEYLMLLGGFVMLTLAVSCDMFIP
FYTGKVIDILGTRYQPNEFISALLFMGLFSLGSSLGAGCRGGVLLCAISSFTCRMKLTLF
GSLTKQEIGFFETTKTGEITSRLSKDTTLMARAVCLNINVLLRTFIKTLGMIALMMSLSW
KLTFLVLMETPVTGLIQNIYDTHNQRLTLAVQDSMAQAAEVVNEVVSSVRAVRSFNAEKH
EARRYDDRLMDTHILRTRQSTIRAVYLLARRLTGLAMQVLMLYYGRLFIQSGQMTAGNLV
SFILYQSNLGDNIRTLTYIFGDMLNSVGAAGKVFEYLDRKPEVCMEGKLKPDQLTGHVIF
RKLNFAYPRDPEKPVLQDFSLELKPGKMTALVGPSGNGKSTCVSLLQRLYQQQDGEILLD
NEPLKSYDHHFLHKKISVVSQEPVLFSGSIRDNIAYGLAGCSLDEIQEAARKANAHDFIM
KLEKGYDAEVGEGGGHLSKSGKQQIALARALVRRPQVLILDEITSSLDTDSENKVLQTLA
GCPDQTRLVIAHKLRTIETADQIVVIEGGRVRERGTHRELMAEQGSYYNLYCTGRDARQP
NGS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagcacagcggcactgagccgcagagctgcagctctggtcttggccgttttt
gtcgacctctgcttgttttacgcagcggggctcgtggtgacgacccgcggcgagtccgga
cacgcggcgcgcctctgggcgctcgcggctgtgcggtgctcggtgctgaccgccgtaacc
cggctgctcctcggagacctgcacccggtgctgatgcgcgtcatcgcggcgcacagtctg
ctgcccgcggtgttccagaccgggaccgacgcgctccgccacgaggacaccgagtgcggc
tcgtctgcggatgtgcgctgctggctcatgggcgccggcgcggcgctggccgccgcgctg
ttctgggaattcaccttcccggacgcagacgacgcggccggcggtcaagagaagaagcag
aagcagaaagccagggtgctgttcgtcagagtcctgcgcctgttcagacccgaatacctc
atgctgctggggggctttgtgatgctgacgctggctgtttcctgtgacatgttcatcccg
ttctacactgggaaagtcatcgacatccttggcactcggtatcagccgaatgaattcata
tctgcgctcctcttcatgggcctgttctctctgggaagctctctgggtgcaggctgcaga
gggggtgtcctcctctgtgccatcagttccttcacatgcagaatgaaactcacgctgttt
gggtctttgaccaaacaggaaattggattctttgagaccacaaagacaggtgagatcacg
tccaggttgtcgaaagacaccaccttgatggcgagagcggtctgtctgaacatcaatgtg
ctgctgaggacgttcatcaagacgctgggcatgatcgccctgatgatgagtctttcatgg
aagctcacgttcctggtgttgatggagacgcccgtcaccggcctcatccagaacatctac
gacacacacaaccagcggctgaccctggcggtgcaggactcaatggctcaggcggccgaa
gtcgtgaacgaggtggtgtccagtgttcgtgcggtacggagcttcaacgcagaaaaacac
gaggcccgtcgatatgacgaccgcctgatggacacacacatcctcaggacccgccagagc
accatcagggcggtttaccttctcgcacggaggttgacagggttggccatgcaggtcctt
atgttgtactacggcaggctgttcatccagagtggacagatgacagctggcaacctggtt
tccttcatcctctaccagtcgaatctcggagataacatcaggacactcacctacatcttt
ggcgatatgctgaactcggtgggcgctgctgggaaagtgtttgagtacctggaccgaaaa
cctgaggtctgcatggaggggaaacttaaaccggaccagctgacgggtcatgtgatcttc
cgcaagctcaacttcgcctatcccagagaccccgaaaaacccgtactgcaggacttttct
ttggagctgaagccgggtaagatgacggcactagtgggtccctctggaaacggaaagagc
acgtgtgtgagtctgctgcagcgcctctaccagcagcaggatggagaaatcctcctggac
aacgaaccgctgaagtcctatgaccaccatttcctccacaagaagatctcggtggtgagc
caggagcccgtgctcttctcgggctccatcagagacaacatcgcctacgggctcgctgga
tgctcattggatgagatccaggaagcggcgcgcaaagccaacgcccatgacttcatcatg
aagctggagaagggctacgacgcagaggtgggtgagggcggcggccatctctccaagagc
gggaagcagcagatcgccctcgctcgagctctggtcaggaggccacaggttctcatcctg
gacgagataaccagctctctggacacggacagtgaaaacaaggtcctgcagacgctggcc
ggctgtcccgaccagacccggctggtgatcgctcacaagctgaggaccatcgagacggcg
gatcagatcgtcgtgatcgagggcggcagagtccgcgagcgagggactcaccgggagctg
atggccgagcaggggagctactacaacctgtactgcaccggtcgtgacgcacggcagccc
aacggcagctaa
DBGET
integrated database retrieval system
