Clinocottus analis (woolly sculpin): 137785207
Help
Entry
137785207 CDS
T10471
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137785207 (vps50)
Membrane trafficking [BR:
cana04131
]
Protein recycling
Others
EARP complex
137785207 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
137785207
NCBI-ProteinID:
XP_068432418
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELRELREQPIDPQAEQEIIDSIEEV
YFSNDSFDMVQHELEKLPPELNLQELEEYRDKLKRQQAAVSKKVADLILEKQPAYVKELE
RVTALQTNLQLAAVICTNARRQLSMAKEGFTEASLGLLSNQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITMDSYIPCLTDLCKALWEVMLSYHRTMQWHEEHDQHETTPTTDG
AAAAESDESVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDVIS
RLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWEHCPVKSNFNI
AQLHEFKFMGQCRSPSISPSRHAGSSTSPAQGELSLFQQYHQEGNPFEMHAEQKEEETED
VLASNGYESDELEKSVYQDYDSDSDVPEELKQDFVDEQTGDAPLKSASRETIRSKKKSDY
NLNKTNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRN
DMPVPSPSLPTHGGRDAGPVRVVGPACLYESSGLGLISSRLRTTLNRIQENLIDMEAAGE
NVTVHSAAEDRKEKVPSPHLSQLVVLTNSGTLYGLAQRVVATESLVFLAEQFESLQSHLD
TMMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMSGVKWDIREIMSQ
HNVYVDVLLKEFEQFNKRLQDVSRHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSN
EGRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQ
LANLVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaaatctctgatggcgcggcagggcctgaagagcccccaggaaagcatg
gcagacctcagtcctgtggagaacctgaggatcccgagcaaggaggagttgcgggagctg
agggagcagcccattgacccccaagcggagcaggagatcatcgacagtatcgaggaggtc
tacttctctaacgactccttcgacatggtgcagcatgaactggagaaactaccacctgag
ctgaacctgcaggagctggaggaatacagggacaagctgaagagacaacaggcagcagtt
tctaaaaaggtcgccgatcttattctggagaaacagcctgcttatgtcaaggaactggag
cgagtgactgcgttacaaaccaacctgcagctggcagcggtcatttgcactaatgcaagg
aggcaactgagcatggcgaaggaggggttcacagaagccagcttgggtctcttgtccaat
cagaggaggcgacagctgctgacaggcctgcttaagtcactgaggaccatcaagacactg
caaagaacagatgttagactcagcgagatgcttgaggaggaagactatccaggtgcaatc
cagctctgtctggaatgtcaaaaggctgccagcaccttcaaacactacagctgcatcagt
gaattaaattccaaactacaagacactctggagcaaatagaggagcagcttgacgtcgcc
ctgtcgaagacttgtaagcactttgatgtttcgcactacaccaaggtccagctggcctac
acgctcctgggcaaaacacagactgctatggaccagcttcacatgcacttcacccaggcc
atccacaacactgtgttccaagtggtgctgggatatgtggagctgtgtgccggcaacgct
gataccaagttccagaagatgcagtacaaggacctgtgcacgcacatcaccatggacagc
tacattccctgcctgacagatctatgcaaggcattgtgggaggtgatgcttagctatcac
cgcaccatgcagtggcacgaggagcacgaccaacacgagaccacacccactacagatggc
gccgcggcagcagagtccgatgagtcggtggtggaccgcagctacgtgaagaagaagctg
gagcatggactgacacggatttggcaggatgtccagttgaaagtgaaggcctacatcttg
gggacggacatgtctaacttcaagtacgacgatttcattgtggtgcttgatgtcatcagc
aggctgatgcaggtgggtgaggagttctgcggcagcaagtcagaggtcctgcaggagtcc
atcaaacgccagagtgtcaactacttcaaaaactatcacagggcacgactggaagagcta
aggatgtttctggaaaatgagacatgggaacattgcccagtgaagtctaactttaacatc
gcccagctccatgagtttaagttcatgggccagtgtcgttctccatccatttccccgagc
agacatgccggatcctcgaccagcccggctcagggggagctttctctgtttcagcagtac
catcaggagggaaatccctttgagatgcatgctgaacaaaaagaggaggagacagaggat
gtgctggcatctaacgggtacgagtcagacgagctggagaagagtgtgtatcaagattac
gacagtgacagtgatgtccctgaggagctcaagcaggactttgttgacgagcagacgggc
gacgcccccctcaagagtgcgtcccgagaaaccataagaagcaagaaaaagtcagactac
aaccttaataagaccaacgcaccgattctcaccaataccaccctcaacgtcatccggcta
gtcgggaagtacatgcagatgatgaacattctgaagccgatcgccttcgatgtcatccac
tgtgtgtcacagctcttcgactactatctgtacgctgtatacacattctttggacgcaat
gacatgcctgtcccaagcccgtctctgccaactcacggtggcagagatgcgggtcctgtc
agggtggtgggccctgcttgcttgtatgagtcatcgggtctgggccttatcagcagcaga
ctgagaaccactctgaaccggatccaggagaacctcatagacatggaggcggcgggggag
aatgttacagtccacagtgcagcagaggaccgaaaggagaaagtgccgagcccacatctc
agtcaactggtggtcctcactaacagtgggactctttatggtctagcacagagagtggtg
gccactgagtctcttgtgtttcttgccgaacagtttgaatccctccagtcccacctggac
acaatgatgcctgcagcgaagaagcccttcctgcaacagttttattcacagacggtgtcg
acagccagtgaacttcggaaaccaatatactggattgttgcagcaaaggccatcgactac
gaacaaatgttactcctgatgtctggcgttaaatgggacattagggagataatgtcgcag
cataatgtgtatgtggacgtcctgttgaaggagtttgagcagtttaacaagcggttgcag
gatgtttccagacatgtgcgcatcccgctgcctgtgtccaacgtgctgtgggagcattgc
atccgcctggccaacaggactctagttgaaggctatgctaatgtgaagaaatgcagcaac
gagggccgggccctgatgcagctggacttccaacagttcctcatgaagctggagaagctg
accgacctgcgacccattcccgataaagagtttgttgagacctacatcaaagcctattac
ctgactgagaatgacatggagcagttcatcaagaatcacagggagtactccatgaagcag
ctcgccaacttggtgaacgtttgtctgggttcacatataaacaagaaggctcgccagaaa
ctcctggcggccatcgatgacattgacaggcccaagagatag
DBGET
integrated database retrieval system
