Clinocottus analis (woolly sculpin): 137785450 Help Entry 137785450         CDS       T10471                                  Symbol fdft1 Name (RefSeq) squalene synthase isoform X1   KO K00801   farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] Organism cana  Clinocottus analis (woolly sculpin) Pathway cana00100   Steroid biosynthesis cana01100   Metabolic pathways Module cana_M00101   Cholesterol biosynthesis, FPP => cholesterol Brite KEGG Orthology (KO) [BR:cana00001]  09100 Metabolism   09103 Lipid metabolism    00100 Steroid biosynthesis     137785450 (fdft1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:cana01006]     137785450 (fdft1) Enzymes [BR:cana01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.21  squalene synthase      137785450 (fdft1) Prenyltransferases [BR:cana01006]  Terpene biosynthesis   Squalene/phytoene synthase    137785450 (fdft1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SQS_PSY HAUS4 TM1266-like Motif Other DBs NCBI-GeneID:  137785450 NCBI-ProteinID:  XP_068432790 LinkDB All DBs Position Unknown AA seq 456 aa AA seqDB search MAGACCKCPVTLSMFKRSLSAASRGGGSAPRSRLPGWRVGERGLQEAARPSSAIRPSGFY RHTGFLCLSYQESMSESLRTCYLYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTV EDDMTIPLDKKVPMLNDFHTFLYQDDWRFTESQEKDRQVLADFPTISVEFRNLAQEYRDV ISDICHRMGAGMAEFLEKKVGSMKEWDLYCHYVAGLVGIGLSQLFSASQLEDPEVGRDTE LANSMGLFLQKTNIIRDYLEDTQEGRAFWPEEAWSQFAGRLEDLAEQEKLESALSCLNLL VTDALRHVPDVIAYLSRLRNQSVFNFCAIPQVMAIATLSSCYNNPMVFQGVVKIRKGQAV TLMMEATSMGAVQTIITQYSREILQKVSLTDPSRDKTLHILSLIEEKSATSQSSLPSRTH HLSPVYLSAAMLLAALSWQYLSTTAVQAQGTSDMQG NT seq 1371 nt NT seq  +upstreamnt  +downstreamnt atggccggagcttgctgcaagtgtcccgtcacgctgtccatgttcaagcgctctctctcg gctgcatcgcggggcggcgggtccgctcctcggtcccgcctgccgggctggagggtcggg gagcggggcctgcaggaggccgcccgaccctccagcgccatcagaccttcaggcttttac cgacacacgggcttcctctgtctctcctaccaggagtccatgagtgagagtctgcgcacc tgctacctgtacctgaaccagaccagccggagctttgcagctgtgattcaagcgctggac ggggagttgagacatgcagtctgtattttctacctggtgcttcgagcgctggacacggtg gaggacgacatgactatccctctggacaagaaagttcccatgctgaatgatttccacacc ttcctgtaccaggatgattggcgcttcaccgagagccaggagaaagaccgacaggttctg gctgatttccccacgatatcagtggaattcagaaacctcgctcaggaatacagagacgtc atctcagatatctgccaccgtatgggagccggaatggccgaattccttgaaaagaaagtg ggatccatgaaggagtgggacctgtattgccattacgtggcgggtctggtcggcatcggt ctgtctcagctgttctctgcgtcccagctggaggaccccgaggtgggacgtgacaccgag ctggccaactccatgggcctgttcctccagaagacgaacatcatccgggattatctagag gacacgcaagagggacgcgccttctggccagaagaggcctggagtcagttcgcaggtcgt ctggaggacttggccgagcaggagaagctggagtcggccctctcctgtctcaacctgctg gtcaccgatgctctgcgacacgtcccggatgtcatcgcctacctgtcccgcctgcgcaac cagagcgtcttcaatttctgtgccattccgcaggtgatggcgatagctactctatcgtcg tgctacaacaaccccatggtgttccagggagtggtgaagatcaggaagggacaggcggtc acgctcatgatggaagccacctccatgggcgccgtgcagaccatcatcacccagtacagc cgggagattttacagaaggtctctctcacggacccgtcgcgggacaaaaccctgcacatc ctgtctctaatcgaggagaagtccgccacgtcgcagtccagcctcccctccaggacccac cacctgtcgcccgtgtacctgtctgccgccatgctgctcgccgctctcagctggcagtac ctcagcaccactgccgtgcaggcgcagggcacgagcgacatgcaggggtag

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