Clinocottus analis (woolly sculpin): 137785609
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Entry
137785609 CDS
T10471
Name
(RefSeq) neurexin-3b isoform X1
KO
K07377
neurexin
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
137785609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137785609
Membrane trafficking [BR:
cana04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
137785609
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
137785609
NCBI-ProteinID:
XP_068433091
LinkDB
All DBs
Position
Unknown
AA seq
1712 aa
AA seq
DB search
MNPISLPGHVLLLLSTMLGLSVGLEFPGSGGQWARYLRWDASSRSDLTFQFKTSESAGLL
LYFDDGGYCDFLLLTVSEGKLQLRVSIDCAETTITSDKAVNDSRWHFATINRHNLRTGLA
VDGHTKTEEVRPQRRFMKIVSDLFLGGLPGDIRTSAITLPSVREVPPFKGIIKDLSYGSK
LPTLINSQKVRLEMMGLCTENPCENGGICSLADGEPYCDCSKTGYVGRYCTEAVQRKPGL
AHLKAEPAREENVATFRGSEYFCYDLSQNPIQSSSDEITLSFKTWQRNGLLLHTGKSADY
VNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNSWHDIKVTRNLRQQSGIGHAMVNKL
HCLVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLREVVY
KNNDIRLELSRLARIVDPKMKLQGDVVFKCENVPTLDPINFETPDSYLALPKWNTKRVGS
ISFDFRTSEPNGLILFTHGKPQDRRDAKGQKNNKVDFFAVELLDGGLYLLLDMGSGTIKV
KATQAKVNDGAWHHVDIQRDGRSGIISVNSRRSPFTASGENEILDLEGDLYLGGLPDSRA
GLVLPTELWTAMLNYGYVGCVRDLFIDGRSKDIRQIAQSQNVTGIKSSCSKVTGKQCDSS
PCKNNGACKEGWNRFVCDCTGTGFWDSTCEREASILSYDGSMYMKVVIPNVMHTEAEDVS
LRFMSQRAFGLLMAATSRESADTLRLELDSGRVKLTVNLDCVRINCNTSKGPEVLYAGQK
LNDNEWHSVRVVRRGKVFKLTVDDDMAEGQMAGDHTRLEFNNVETGILTERRFVSSAPSS
FIGHLQSLKFNGMQYIDMCKNGDIDFCELNARFGMRFIIADPVTFKTKGSYLGLATLQAY
TTMHLFFQFKTTSPDGFIIFNSGDGNDFIAVELVKGFIHYVFDLGNGPSLLKGNSDNSLN
DNQWHNVVITRDASNTHTLKVDAKSVTQNVNGAKNLDLKGDLFVGGLGPNMYQNLPKLVV
SREGFQGCLASVDLNGRLPDLINDALFRSGQIERGCEVGFTKADLQGPSTTCQEDSCANM
GVCIQQWENFTCDCSMTSYSGTHCNDPGTTYIFGKGGGLITYTWPNNERPSTRTDRLAVG
FSSTIKDGILVRIDSAPRLGDYIMLHIEQGKVCVTFNIGTIDISVKETTTAINDGKYHLV
RFTRNGGNATLQVDNWPVNEHFPTGNSDIERYQMANKKIPFKYTRPVEDFLQEKGRQLTI
FNTQATISIGGNDRKRPYQGQLSGLYYNGLKVLNMAAEGHVNIKVNGSVRLVGDVPVSRG
AARTTTSVPPEMSTTFIETTTTLSTTTTRKQRSPPTIQTTDDIVSSAECSSDDEDLEECD
SGHAGGELVIPVLVEDPIDIPSVSTRSPFIPFPPTLRPVLTIIETTKESMAMATEAGVPC
LSDRGGDDCDDGDGGDDGDDDDDDGMVISGFGSGEAFDSSLPPTDDEDFYTTFSLVTDKI
LTTSAYEGGYKALAPKWEAKDLRPSKASEAGRTTPTSPLPDLRGTPPAAVPSDTPPKLPA
GKMNNREVKPPQPDIVLLPLPTSFDLDGTKPRGPFITSPMLRTVPAALPTVPGVVRRVPP
GASEVIRESSSTTGMVVGIVSAAALCILILLYAMYKYRNRDEGSYQVDETRNYISNSAQT
NGAVVKDKTPSGSTKGSASSKRPKDKDKEYYV
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatcagcctacctggtcatgtcctcttgctgctgagtaccatgctgggcctg
agcgtaggcttggagttccctggctctggaggtcagtgggctcgctacctgcgctgggac
gccagctccagaagtgacctgacatttcaattcaagacttcagaatccgcaggcctgctg
ctctacttcgacgacggcggctattgcgactttctgcttctcactgtatccgagggtaag
ctgcagctccgcgtcagcatcgactgtgctgagaccaccatcacctctgacaaggcggtc
aacgacagccgctggcactttgcaaccatcaacaggcacaatctgcggactggcttggct
gtggatggacacaccaagacggaggaggtgcggccccagaggcggtttatgaagatcgtt
agtgacctcttcctcggagggctcccgggggacatccgcacatctgccattaccctgccc
tctgtccgtgaggtaccaccattcaagggaattatcaaagacctcagttatgggagtaag
ctgcccacactcatcaatagtcagaaagtacgcttggagatgatgggcctttgcacggag
aacccctgtgagaatggcgggatctgctctctggctgatggagaaccctactgtgactgc
tccaaaactggatatgtaggtcgatactgcactgaagcagtccagagaaaaccaggcctc
gcacacctgaaggcagagccagcgagggaggagaacgtggccaccttccggggctcggag
tacttctgctacgacctgtcgcagaaccccattcagagcagcagtgacgagatcacgctg
tccttcaagacctggcagcgtaacggcctcctcctccacacggggaaatccgccgactat
gtcaacctggcgctcaaagacggggccgtctccctcgtcatcaatctgggctccggggcc
ttcgaggccatcgtggagccggtcaatggaaagttcaacgacaactcctggcacgacatc
aaagtgacacgcaacctgagacagcaatcaggcattggacacgctatggtaaacaaacta
cattgtctggtgactatctccgtcgacgggatcctcactaccacgggctacacccaggaa
gactacaccatgctgggctcagatgatttcttctacgtgggtgggagccccagcacggcg
gacctgcccggatctcctgttagcaacaatttcatgggctgcctccgagaggtggtgtat
aagaacaatgacatcaggctggagctgtcccgcctcgcccgcatcgtggaccccaagatg
aaactccagggcgacgtggtcttcaagtgcgaaaacgttcccaccctcgaccccatcaac
ttcgagacgccagactcctacctggccttgcccaaatggaacaccaaacgcgttggttcc
atctcgtttgatttccgcacctccgaacccaatggcttgatcctcttcacccacggcaag
ccccaggaccggagggacgccaagggccagaagaacaacaaggtggacttctttgcggtg
gagctgctggacggagggctgtacctgctgctggacatgggctccggcaccatcaaggtc
aaggccacgcaggccaaggtcaatgacggcgcctggcaccatgtggacatccagagggac
ggccgctcaggcatcatctcagtcaacagccgccgatcccctttcacagccagcggggaa
aacgagatcttggacctggagggagacctttatctggggggtctgcctgacagccgggcg
ggcctggtgctccccaccgagctctggaccgcgatgctgaactacggctacgtgggctgc
gtccgagacctgttcatcgacggacgcagcaaagacatccggcagatagctcagtcccag
aacgtgaccggcatcaagtcctcgtgcagcaaggtgacggggaagcagtgcgacagcagc
ccctgcaagaacaacggcgcctgcaaggagggatggaaccgcttcgtctgcgactgcact
ggaaccggcttctgggatagcacctgtgagagagaggcatccatcctgtcgtacgacgga
agcatgtacatgaaagtggtgattccaaacgtcatgcacacggaggccgaggacgtctcc
ctgcgcttcatgtcccagcgggcgttcggcctgctcatggccgccacgtcccgcgagtcg
gcggacacgctgaggctggagctggacagcggcagagtcaaactgacggtcaacctagac
tgtgtcaggataaactgtaacaccagcaagggccctgaagttctttatgccggacaaaag
ctcaacgacaatgagtggcactcagtacgagtggtccgccgcggtaaagtcttcaaactc
acggtggatgacgacatggctgaaggtcagatggcgggcgaccacacccgcctcgagttc
aacaacgtggagacgggcatcttgaccgagaggcgctttgtctcgtcggctccctcctcc
ttcatagggcatcttcagagccttaagttcaacgggatgcagtacatcgacatgtgcaag
aacggggacatcgacttctgtgagttaaacgcccgctttggcatgcgcttcatcatcgcc
gaccccgtgaccttcaagaccaagggcagctacctgggcctggccactctgcaggcctat
accacaatgcacctcttcttccagttcaaaaccacctcgcctgacggcttcatcatcttc
aacagcggagacgggaacgacttcatcgctgtagagctggttaaagggttcatccactat
gtgtttgacctggggaacgggcccagtctgctgaaggggaacagtgacaactcgctgaac
gataaccagtggcacaacgtggtcatcacgagggacgcctccaacacgcacacgctcaag
gtggacgccaagtcagtcacccagaatgtcaacggagccaagaacctggacctcaaaggt
gacctgtttgtcggaggtctggggcccaacatgtaccagaacctcccgaagctggtggtt
tctcgggagggcttccaaggctgcttggcctcagttgacctcaacggccgcctgccagat
ctcatcaacgacgcccttttccgcagcgggcagattgagcgaggctgtgaagttggtttc
accaaagccgacctgcaaggcccgagcaccacctgccaggaggactcgtgcgccaacatg
ggcgtgtgtatccagcagtgggagaacttcacttgtgactgctccatgacgtcttactcg
ggaactcactgcaacgaccctggcaccacctacatcttcggtaaaggaggaggtctgatc
acctacacgtggcccaataacgagaggccaagcacacggacggaccggctggccgtgggt
ttcagctccaccatcaaagacggcatcctcgtccgcatcgacagcgcccctcgcctgggt
gactacatcatgctccacatcgagcaaggcaaagtgtgtgtgacgttcaacattgggaca
atagacatcagcgttaaggagacgaccacggcgataaacgatggcaaataccatttggtc
cggttcaccaggaacgggggtaacgccaccttgcaggtggacaactggccggtcaatgaa
cacttccccacaggcaacagcgacattgagcgctatcaaatggcaaataagaaaatcccg
ttcaaatatacccggccagtagaagattttcttcaggagaaaggccggcagctgaccatc
ttcaacacccaagccaccatctccatcggcggaaacgaccggaagcggccctaccagggc
cagctctccggcctctactacaacggcctcaaggtgctcaacatggccgccgagggccac
gtcaacatcaaggtgaacggcagcgtgcggctggtgggcgacgttccggtcagccggggc
gcggcgcgcaccaccacctcggtgccgccggagatgtccaccaccttcatcgagaccacc
accaccctgtccacgacaaccacccgcaagcagcgctcaccacccaccatccagacgacg
gatgacatcgtttcgtcggcggagtgctccagcgacgacgaggacctggaagagtgcgac
tcgggacatgcaggaggggaactagtcatccccgtgctagtcgaggaccccatagacatc
ccctctgtatccacccgttctccattcatccccttccccccaaccctccgccccgtcctc
accattattgagaccaccaaagaatccatggccatggccactgaggcgggggtaccttgc
ttgtcggaccgaggcggcgatgattgtgatgatggtgatggtggtgatgatggtgatgat
gatgatgatgatggcatggtgatttcggggtttggctctggcgaagctttcgactctagc
ctgcccccgactgacgatgaagatttttacaccaccttctccctggtaacagataagatc
ttgaccacatcggcctatgaaggcggctacaaagccctcgcgcccaagtgggaggccaag
gacttgaggcctagcaaagcctcagaggcaggtaggactacacccacctcgcctctgccc
gacctccggggcacgccgccggcggcggtcccctcggacacgccacccaagctgcccgcc
gggaaaatgaacaaccgcgaggtaaaacccccgcagccagacatagtcctgctgccgctg
cccacgtccttcgatctggacggcaccaagccgcggggccccttcatcacctcccccatg
ctgcgcacggtgcccgccgccttgcccaccgtgcccggcgtggtgcggcgggtgcccccg
ggggcctcagaggtgatccgggaatccagcagcaccacgggcatggtggtgggcatcgtc
tcagccgccgccctctgcatcctcatcctcctctacgccatgtacaagtacaggaacaga
gacgagggctcctaccaggtggacgagacgcgcaactacatcagcaactcggcgcaaacc
aacggcgccgtggtgaaggataaaacgcccagcggaagcaccaaaggcagcgccagtagc
aagagaccgaaagacaaggacaaggaatattatgtatag
DBGET
integrated database retrieval system