Clinocottus analis (woolly sculpin): 137785710
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Entry
137785710 CDS
T10471
Symbol
trim54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
137785710 (trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cana04121
]
137785710 (trim54)
Ubiquitin system [BR:
cana04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
137785710 (trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-RING_6
zf-RING_2
Sina_RING
DUF5799
DUF885
zf-RING_10
Prok-RING_4
CYP38_PsbQ-like
Zn_ribbon_FGT1_2
Aldedh
Zn_ribbon_FGT1_1
Motif
Other DBs
NCBI-GeneID:
137785710
NCBI-ProteinID:
XP_068433262
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MNFAVRPPSAGSSGPGAGRGATMENLEKQLICPVCLELFSKPVVILPCQHNLCRKCANDI
FQSANPLWQSRGSSSTAPSGTRFRCPSCRHEVALDRHGVYGLQRNLLVENILDIYRQQES
SRLVNIKPGQQQQQQQLLCEEHDEEKINIYCLSCETPTCSMCKVFGKHKDCDVAPLSSVY
MRQKTDLSDGIAVLVASNDHVQAVITQMEEICHSVEESGRRQTEQLISRLDGLVAVLDQR
KQELVGLIAREQDDKLKHVRSLIRRHSDHLEAAAALVESAIQSIEELHMPVFIQSASVIL
ERMAETTRDSNMERPELGYEDMSHFVMDTDELADMLRNMDFSPDTLRGVGHDGEEDPEGD
GEDAELDFCSKF
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgctgtcaggcctccatcagcaggcagttctgggcccggcgccggcagagga
gccaccatggagaacctggagaagcagctgatctgccccgtctgcctggagctgttctcc
aaacccgtggtcatcctgccctgccagcacaacctctgccgcaagtgtgccaacgacatc
ttccagtcggccaaccctctgtggcagtcccgtggctcctccagcacggctcccagtggc
actcgcttccgctgcccatcgtgccgccacgaggtggcgctggaccgccacggggtctac
ggtctgcagaggaacctgctggtggagaacatcctcgacatctacagacagcaggagtcc
tccaggctcgtgaacataaagccggggcagcagcagcagcagcagcagctgctgtgcgag
gaacacgacgaggagaagatcaacatctactgcctgtcctgtgagacgccgacctgctcc
atgtgcaaagtgttcggaaaacacaaagactgtgacgtcgctccgctcagcagcgtctac
atgagacagaagaccgacctgagcgatggcatcgcggtcctggtcgccagtaacgaccac
gtccaggcagtcatcactcagatggaagaaatctgccactctgtggaggagagcggtcgc
cggcagacggagcagctgatctctcgcctcgacggcctggtggccgtcctggaccagcgg
aagcaggagctggtggggctcatcgcccgagagcaggacgacaagctcaaacacgttcga
tcgctcatccgccggcacagcgaccacctggaggccgcggcggcgctggtggagtcggcc
attcagtccatcgaagagctccacatgcccgtgttcattcagagcgccagcgtcatactg
gaaaggatggcggagacgaccagggactcgaacatggagcgaccggagctcggttatgag
gacatgagccacttcgtcatggatactgacgagctggccgacatgctgaggaacatggac
ttctcaccggacacgctccgtggtgtgggacatgatggagaggaagatcctgaaggagat
ggagaggacgcagaactggacttctgctccaaattttga
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