Clinocottus analis (woolly sculpin): 137785764
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Entry
137785764 CDS
T10471
Symbol
prpf39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
cana Clinocottus analis (woolly sculpin)
Brite
Spliceosome [BR:
cana03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
137785764 (prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
TPR_16
Focal_AT
TPR_MalT
TPR_12
ARM_TT21_5th
TPR_10
ARM_TT21_2nd
Motif
Other DBs
NCBI-GeneID:
137785764
NCBI-ProteinID:
XP_068433345
LinkDB
All DBs
Position
Unknown
AA seq
793 aa
AA seq
DB search
MEDTDLHLSDDTITGMLDTESPVMESNGDAFLPDLPVIGQTSDWSPDQVTPEPMNNILPE
DSDASQDAPLQQRSPNEEMDSTELSSVEKAVEQFQIANAQLFQIEQPPPPPLPAEEEERP
QQPAEQKTESEESELDGPEMTVRPEADGSQGGTEAPQETDDGMELEEAPKESPPEPTVLL
EPEPSELEKLFKGCEDNPEDFNGWVYLLQFVEQENDLSAVRRSFDAFFLRYPYCYGYWKK
YADIEKKHENIQVAEEVYRRGLQAIPLSVDLWLHYLTYIKENSDLTDPETEGRIRAAFEH
SVLAAGTDFRSDRLWESYIAWETEQEKLANVTAIYDRVLGIPTQLYSTHFQRFKDHVQNN
NPKHYLSEEEFVQLRLELSKASLLAMIGEVEETPITAQDELPPGTDDLVDPAKRVTEIEN
MRHKVIEVRQEVFNHNEHEVSKRWAFEEGIKRPYFHVKALEKTQLNNWKEYLDFEIENGI
PERVVVLFERCLIACALYEEFWTKYAKYLEGYSIDGVRHVYKKAATIHMPKKPTIHLLWA
AFEEQQGNVEEARSILKSLEESVPGLAMVRLRRVSLERRHGNLEEAEALLREAMDSAKNA
TETSFYAVKLARQMMKVQRSLSKARKVLLDAIEKDQTSPKLFLNLLELEYSGDVIQNEVE
ILACFDRALKSQMPLESRLLFCQRKVEFLEDFGSDINVLVAAYEEHQKLQKESETSKRKA
ENGYDSSQEPDAKRQRVDDDTSGDPNAVTDAHANNSAYNSWYQQQYGGWGQQNSWGQYNQ
YAQYNQYYPPPPT
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggaagacacagatctgcatctttccgacgacactattactggaatgctggacactgag
tcccctgtcatggagagcaatggggatgcctttctgcctgaccttcctgttataggccaa
acttctgactggtcccctgaccaggttactccagaaccaatgaacaacatcttgcccgag
gactctgatgcgtcccaggatgctccactgcaacagcggtctccaaacgaggagatggat
tccactgagctgagttctgtggagaaggctgttgaacagtttcagattgccaatgctcag
ctcttccaaattgagcagccgccacctccaccgctacctgctgaagaagaagaacggcca
caacagccggctgaacaaaaaacagagtctgaagaatctgaactagacggcccggagatg
accgtcaggccagaagctgatggcagtcaaggtgggactgaggcaccacaggagaccgat
gatggcatggagctggaagaagcacccaaagagagcccaccagaaccaactgttctttta
gagccagagccgagtgagttggaaaaactcttcaaaggatgtgaggacaacccagaagac
ttcaatggctgggtctacttgttgcagtttgtggaacaagagaatgacctttcggctgtg
agacgctcatttgatgcattcttcctacgttatccctactgctatggctactggaagaag
tatgctgatattgagaaaaagcacgagaatatccaggttgcagaagaggtatacagaaga
ggcttgcaggccatccctctcagtgtggatctgtggctccattacctaacctacatcaaa
gagaactcagacctgactgacccagagactgagggacgcattagagcggccttcgaacac
tcggtgcttgcagcaggcacagactttcgctcggaccgtctgtgggagtcctatatcgct
tgggagacggagcaggagaaattggctaacgtcaccgccatctatgaccgagtcttggga
atcccaacccagctgtattccacgcacttccagaggttcaaagatcatgtgcagaacaac
aaccccaagcactacttgtcggaagaggagtttgttcagctgaggctcgagctctcaaaa
gccagcctattggcgatgattggcgaggttgaggagacgcccattactgctcaggacgag
ttgccacctggtacagatgatctcgtggaccctgccaagagggtgaccgagattgagaac
atgcgccacaaggtgatcgaggtgcggcaggaagtgttcaaccacaacgaacatgaagtc
agcaagcgctgggccttcgaagaagggattaagagaccatacttccatgtcaaagcccta
gagaagacccagctcaacaactggaaggagtacttggactttgaaattgaaaatgggatc
cctgaacgcgtggttgttctttttgaacgatgcctcatcgcttgtgcactctacgaagag
ttctggaccaagtatgcaaaatatctagagggctacagcattgacggcgtgagacatgtc
tacaagaaggcggctaccatccacatgcccaagaaaccaaccatccatctgctgtgggcc
gcttttgaagagcagcaagggaatgtggaggaggcgcgtagcatcctgaagtccctggag
gagtccgtcccgggtctggccatggtgcgtctccggagggtcagccttgagcgtcgccac
ggaaacttggaggaggcggaggctctgttgcgggaggccatggactctgcgaagaatgct
actgagacatcgttctatgctgtgaagttggcccggcagatgatgaaggtgcagagaagt
ctgagcaaggccaggaaagtgctgctggatgccatcgagaaagatcagacgagtccaaaa
ctctttctcaacctgcttgagctggaatacagcggggatgtgatccagaacgaggtggag
atcttggcgtgtttcgaccgagccctgaagagccagatgccccttgaatcccgcctcctc
ttctgccagcgcaaggtcgagttcctcgaggactttggcagtgacatcaatgtgctcgtg
gccgcatatgaggaacaccagaagctccagaaagaaagcgaaacctcaaagaggaaggcc
gagaacgggtatgacagctctcaggagcccgacgcaaagagacagcgcgtggacgacgac
acctcgggtgaccccaacgcagtgaccgacgctcatgctaacaactctgcatacaacagc
tggtaccagcaacaatacggcggttggggacaacaaaactcctggggacagtacaaccaa
tatgcccaatacaaccagtactaccctcctcccccaacatga
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