Clinocottus analis (woolly sculpin): 137785891
Help
Entry
137785891 CDS
T10471
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04140
Autophagy - animal
cana04148
Efferocytosis
cana05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
137785891 (vps18)
04148 Efferocytosis
137785891 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
137785891 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137785891 (vps18)
Membrane trafficking [BR:
cana04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
137785891 (vps18)
Hops complex
137785891 (vps18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_16
zf-RING_11
DUF1664
zf-C3HC4_2
DUF5600
zf_RING_Vps8
zf-ANAPC11
zf-RING_Vps41
zf-rbx1
zf-RING_UBOX
zf-C3H2C3
DUF2175
DUF4446
zf-RING_5
zf-C4H2
Motif
Other DBs
NCBI-GeneID:
137785891
NCBI-ProteinID:
XP_068433551
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MASILDEYEDSQNSRQSAPQHSRLSTANIGIAHSGFVNVRLEEEKPIFNKQRIDFTPPER
INHLAVCNNQLCMSLGKDTLLRIDLAKPDQPNQTELGRKDDSKVYRLFLDPTGSHLLICL
NTSECLYLNRNTQKVRSLSRWRGHLIESVGWNKLLGSETNTGPILVGTSQGIIFEAEISA
TEGSLFNTNPDQYFKQVHSVEEDGKPAPVCCLEVERGLENKYFIIATTRKRLFQFVGKLA
EGSEQQGYSSIFSQNHDLLPSFQEFPANMGYSEITFYTPKLRTAPKAFAWMMGNGVLYGQ
LDYIRPDSLLSDVQVWDYTPDIDLSLNKPISIVLTQFHFLLLLHDRVKAICTLNGQVVHE
DVFPDKFGTLKKMIKDPVGGLVWIYTERAVFRYHIQREARDVWQMYMSMTKFDLAKEYCR
DRPECMDMVLAREAEHCFQNKRYLESAKCYAMTQNYFEEIALKFIEAKQEEALKEFLLKK
LNNLKPSERTQITLLVTWLAELYLNRLGQLESDGNSVIFQETREEFRQFLSNSKHKECLY
NNRSTIYDLLASHGNVDDMVYFSVVMQDYERVISHYCQHDDYSAALDVLSKHCDQKLFYK
FSPVLMQHIPKKVVDAWIQMGKRLDPKKLIPALMNYSQMGSTQQISETIRYMEFCVYELT
VTEEAIHNYLLSLYAKYKPDSLLWYLEQAGTHVSDIRYDLKYALRLCAENGYLRACVLVY
RIMELYEEAVDLALQVDVDLAKSCADLPDDDEELRKKLWLKIARHVVQEEKDVKKAMNCL
SSCNLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNQHIEELKQEMEEATESAKRIREDI
QEMRNKYGVVDSQEKCAACDFPLLNRPFYLFLCGHMFHYDCLFQEVTPHLTAFKQSRLED
LQKKLAATTQSSKSRHRPAPKEEGDTASLGKGNAGTSREQIKSDMDDIIACECVYCGELM
IKSIDKPFIDPQKFEEEKSSWL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgattctcgacgagtacgaggactctcaaaacagcaggcagagtgcgccgcag
cacagccgcttgtcgactgccaacatcgggatcgctcattcaggcttcgtgaacgtgaga
cttgaggaagagaagccgatattcaacaagcagaggatcgacttcacaccgcccgagagg
atcaaccacctcgcagtctgcaacaatcagctatgcatgagcctggggaaggacaccctg
ctgaggattgacttggccaagccagatcagcctaatcagactgaattagggaggaaagat
gacagtaaagtgtacagactgttcctggatcccacaggctcccatctgctgatctgcctg
aacaccagtgagtgtctgtacctcaacaggaacacgcagaaagtgcgcagcctgtcccgc
tggaggggccacctcatcgagagtgtgggctggaacaagctgctgggcagtgagaccaac
acgggccccattctggtcggcaccagtcaaggcatcatctttgaggcggagatctccgcc
actgagggcagtctgttcaacaccaatccggatcaatacttcaaacaggtccactctgtt
gaggaggatgggaagcccgcaccagtctgctgcctggaggtggagcggggactggagaac
aagtacttcatcatcgccaccacccgcaaacgcctgttccagtttgtgggtaagttggcc
gaggggtcggagcagcagggctacagctccatcttcagccagaaccatgacctgctgccc
agcttccaggagttccccgccaacatgggctacagcgagatcaccttctacaccccgaag
ctccggaccgccccgaaggcgttcgcctggatgatgggtaatggagttctctacggtcag
ctggactacatccggcccgattccctgctgagtgatgtgcaggtgtgggactacaccccc
gacatagacctcagtctcaacaagcccatctccattgtgctgacgcagttccacttcctg
ctgctcctccacgaccgagttaaagccatctgcactctgaatggacaggtggtgcacgag
gatgtgttcccagataaatttggcaccctcaagaagatgatcaaggacccggtcggtggg
ttggtgtggatatacactgagcgggcggttttccggtaccacatccaacgcgaggccagg
gacgtctggcagatgtacatgagcatgactaagtttgacctggccaaggagtactgccga
gaccgcccagagtgcatggacatggtgctggccagggaggcggagcactgcttccagaac
aagcgctacctcgagagtgccaagtgctacgccatgacgcagaactacttcgaggagatc
gcgctcaagttcatcgaagccaaacaagaggaagccctgaaagagttcctgctgaagaag
ctgaacaatttgaaacctagcgagagaacgcagatcaccctgctggtcacctggctggcc
gagctctacctgaaccggctcggccagctggagagcgacggcaacagcgtcatcttccag
gagacccgcgaggagtttcggcaattcctcagcaactccaagcacaaggagtgcctgtac
aacaaccgcagcaccatctacgacctgctggccagccacggcaacgtggacgacatggta
tacttctccgtggtcatgcaggactacgagagggtgatatcgcactactgccagcacgac
gactacagcgccgctctggacgtgctctccaagcactgtgatcaaaagcttttttacaag
ttctccccggtcctcatgcagcatattcccaaaaaggtggtggacgcgtggatccagatg
ggcaagcggctggacccaaagaagctcatcccagcgctgatgaactacagccagatgggc
agcacgcagcaaatcagtgaaaccatccgctacatggagttctgcgtgtacgagctgacc
gtgacggaggaggccatccacaactacctgctgtctctgtacgccaagtacaagccagac
tccctgctgtggtatctggagcaagcgggcacacacgtttcggacatccgctatgacttg
aagtacgccctcaggctgtgcgccgaaaacggctacctccgggcatgtgtcctggtttac
aggattatggagctgtatgaggaggcggtggatcttgctttacaggtagacgtggacttg
gccaagtcatgcgccgacctgcccgacgatgacgaggagctgaggaagaagctttggctg
aagatcgcccggcatgtggtgcaggaggagaaggatgtgaagaaagccatgaactgtctg
tccagctgcaacctgctcaagattgaagacatcctgccattcttcccagactttgtcacc
attgaccattttaaggaggccatatgcagctccctggaggagtacaatcagcacatcgag
gagctaaaacaggaaatggaggaggccacggagagcgccaaacgcatcagggaagacatc
caggaaatgaggaacaaatatggcgtcgtggattcccaagaaaagtgtgctgcttgtgac
ttcccgttgctcaacaggcccttctatctgttcctatgtggacacatgttccactatgac
tgtctgttccaggaagtaacccctcacctgacggcctttaagcagagccgtctggaggat
ctgcagaaaaagctggccgcgaccacgcaatcctccaagtctcgacaccgcccggcgccc
aaggaagaaggagacactgccagcctgggaaagggcaatgcaggcacaagtcgtgagcag
ataaaatcggacatggatgacatcattgcgtgtgaatgcgtgtactgcggggaactgatg
atcaagtccatcgacaagccgttcatcgatccgcagaaatttgaggaggagaaatccagc
tggctataa
DBGET
integrated database retrieval system
