KEGG   Clinocottus analis (woolly sculpin): 137785941
Entry
137785941         CDS       T10471                                 
Symbol
ddb1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana03420  Nucleotide excision repair
cana04120  Ubiquitin mediated proteolysis
Brite
Ubiquitin system [BR:cana04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     137785941 (ddb1)
DNA repair and recombination proteins [BR:cana03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      137785941 (ddb1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      137785941 (ddb1)
SSDB
Other DBs
NCBI-GeneID: 137785941
NCBI-ProteinID: XP_068433620
LinkDB
Position
Unknown
AA seq 1140 aa
MSYNYVVTAQKPTAVNACVTGHFTSADDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTSKYNACILEYKQTGDSIDIITRAHGNVQDRIGRPSETGI
IGIVDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELQVIDVHFLYGCQAPTVCF
IYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH
NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGTVALKDL
HVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDQGSYVGVMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGKE
TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVAHQQLIQITSGSVRLVL
QESKALVSEWKEPQGRNISVAACNHTQVVLAVGRALYYLQILAGELKQISTMEMEHEVAC
LDITPLGDGGGESPLCAVGLWTDISARVLKLPCFTALHKEMLGGEIIPRSILMTTFEGSY
YLLCALGDGALFYFGLDLQTGTLSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRRICYQEVSQCFGVLSSRVEIQDVSGSTSAVRPSASTQALSSSVSSSKLFPSSTSPHET
SFGEEVEVHSLLVVDQHTFEVLHAHQFLPSEYALSMVSCRLGKDPSVYFIVGTAMVYPEE
AEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFCHGSLVLQNLGES
STPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTER
KTEQATGFIDGDLIESFLDLGRAKMQEVVSTLQIDDGSGMKREATVDEVIKIVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtggtaacagcccagaaacccacggcggtgaacgcctgcgtcaca
ggccacttcacctctgcggatgacctcaatctgctcatcgctaaaaacacccggctggag
atctatgtggtgacagcagaggggctgaggcccgtcaaggaggtgggcatgtacgggaag
atcgccgtcatggagctcttcaggccaaagggtgagagcaaagacctgctgttcatcctc
acatccaagtataacgcctgcatcctggaatacaaacagaccggggacagcatcgacatc
atcacccgggcccacggcaacgtccaggatcgcatcgggcgtccgtcagaaacgggcatc
atcggcattgtggacccagaatgccgtatgatcggcctgcggctgtacgacgggctgttc
aaggtgatcccactggaccgggacaaccgcgagctcaaggccttcaatatccgactggag
gagctgcaggtcatcgacgttcacttcctgtacggctgccaggccccaacagtctgcttc
atctaccaggacccccaaggacgccatgtgaagacctacgaggtttctctgagggagaag
gagttcaacaagggcccctggaagcaggagaacgtggaagctgaggcgtccatggtcatc
ccagtgccagaaccatttggtggcgctataatcataggacaagagtccatcacctaccac
aacggagacaaatacttggccattgcaccaccgactatcaagcaaagcaccattgtctgc
cacaatcgggtggaccccaacggctctcgctacctgctcggggacatggagggccggctg
ttcatgctgctgctggagaaggaggagctgatggatggcacagtggcgctcaaagacctg
catgtggagctgctcggcgagacgtccatcgcggagtgtttgacctacttggacaacggt
gtggtgttcgtgggctccagactgggagactcccagttagtgaagctcaacgtggacagc
aacgaccagggctcgtatgtcggggtgatggagaccttcaccaacctgggccccatcgtg
gacatgtgtgtggtcgacctggagaggcagggccagggccagctggtgacgtgctctggt
gcgttcaaggagggctcccttcggatcattcgcaacggcatcgggattcacgagcacgcc
agcatcgacctgccgggaatcaaaggtttgtggccactccgctccgaggccggcaaggag
acggacgacatgctggtgctgtctttcgtgggtcaaacgcgagtgttgatgctgagtggc
gaggaagtagaggagaccgaacttcccggctttgtggacaaccagcagacgttttactgc
ggcaacgtggcgcatcagcaactcattcaaatcacgtcgggctctgtgcgcctggtgctc
caggagagcaaggcgctggtaagcgagtggaaggagccacagggcaggaacatcagcgtg
gccgcctgcaaccacactcaggtggtgctcgccgttggacgagccctctactacctgcag
atcctggccggggagctcaaacagatcagcaccatggagatggagcacgaggtggcctgt
ctggacatcacgcctctgggggacggtggcggcgaatcaccgctctgcgccgtgggcctc
tggaccgacatctctgcccgggtgctcaaactgccctgcttcacagcgctgcacaaggaa
atgctgggcggagagatcatccctcgctccatcctaatgaccacctttgaaggcagctac
tacctgctgtgtgcgctaggagacggagcactcttctatttcggtctggacctgcagact
ggcaccctgagcgagcgcaagaaggtcaccctgggcacgcagcccactgtgctgaggacc
ttcagatccctttccacctccaacgtcttcgcctgctccgaccggcccaccgtcatctac
tcctccaaccacaagctggtcttctccaacgtcaacctcaaggaggtcaactacatgtgc
cccctcaattctgagggctaccctgacagtctggctttggccaacaacagcacgctgacc
atcggcaccattgacgagattcagaagctgcacatccgcaccgttcccctctacgaatcc
cccaggcggatctgttaccaggaggtttcccaatgtttcggggttctttccagcagggtg
gagatccaggatgtgagcggctccacatctgccgtgcgccccagcgcgagcactcaggcg
ctctccagcagcgtgagctccagcaagctcttccctagcagcacttcacctcacgagacc
tccttcggcgaagaggtggaggttcacagtctgctggtcgtggaccagcacacctttgaa
gttctccacgcccaccagttcctccccagcgagtacgccctcagcatggtgtcgtgccgt
ctgggaaaagacccgtcggtgtattttatcgtcggcaccgccatggtgtacccagaggag
gcggagcctaagcagggacgcatcattgtcttccactacaccgacggtaagctgcagacc
gtggctgagaaggaggtgaagggagccgtctactcaatggtggagttcaacggcaagctg
ctggccagcatcaacagcacagtccgcctgtacgaatggacggctgagaaggagctgagg
accgagtgcaaccactacaacaacatcatggcgctctacctgaagaccaagggagacttc
atcctggtgggagacctgatgaggtccgtcctgctgctggcctacaaacccatggagggc
aactttgaagagattgcacgtgacttcaatcctaactggatgagtgcggtggagatcctg
gacgacgacaacttcctgggggcggagaacgcgttcaatctgtttgtgtgccagaaggac
agtgcggccaccacggacgaagagcggcagcacctgcaggaggtcggggtcttccacctc
ggggagtttgtgaacgtcttctgtcacggctcgctggtgctgcaaaacctcggcgaaagc
tccacgcccacacagggctccgtgctctttggcaccgttaacggcatgattggtctggtg
acgtccctgtcagagggctggtacagcctcctcctggacttgcagaaccgcctcaacaag
gtcatcaagagcgtgggcaagatcgagcacagcttctggaggtccttccacacggagcga
aagacggagcaggccacgggattcatcgacggggatctgattgagagcttcctggacctc
ggtcgagccaagatgcaggaggtcgtcagcactttacagatcgacgacggcagcggcatg
aagcgtgaggccacggtggacgaggtcattaagatcgtggaggagctgacgaggatccac
taa

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