Clinocottus analis (woolly sculpin): 137786004
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Entry
137786004 CDS
T10471
Name
(RefSeq) syndecan-3-like
KO
K16338
syndecan 4
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04512
ECM-receptor interaction
cana04514
Cell adhesion molecules
cana04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137786004
04514 Cell adhesion molecules
137786004
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
137786004
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cana00535
]
137786004
Proteoglycans [BR:
cana00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
137786004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
FeoB_associated
Protocadherin
Motif
Other DBs
NCBI-GeneID:
137786004
NCBI-ProteinID:
XP_068433690
LinkDB
All DBs
Position
Unknown
AA seq
159 aa
AA seq
DB search
MTIPMAATFLLALGLIHPISMSMSVTPEDLEGSGYELDSFGSGSGDWLEQGEIENIKDQP
SNKGTKNPSHGSPVLNIDDTYKGSGSGFIVVANSKSFLENKEIFAAVIAGGVIGVAIAAA
VATLLIYMWQKKDNGGYIAGQQRASDGDYHRPSREGFLV
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgacaatccctatggcagcgacctttctcttagctttggggttaatccatcccatcagc
atgtcgatgtctgtcactcctgaggacttagagggatcaggatatgaattggacagtttt
ggttctggttcaggggattggttagaacaaggggaaatagaaaacatcaaggatcaaccc
agcaacaaaggaaccaagaatccttcccacggttctccggtcctgaacattgatgataca
tacaaaggcagcggatcaggatttattgtcgtggcaaacagcaagagtttcttggagaac
aaagaaatctttgccgctgttattgcaggaggagtgataggggtggcgattgcggctgca
gtggcaacattattaatctacatgtggcagaaaaaagataacggaggatacattgcgggt
cagcaaagggcttcagacggagattatcacagacccagcagggagggatttcttgtttag
DBGET
integrated database retrieval system