Clinocottus analis (woolly sculpin): 137786005
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Entry
137786005 CDS
T10471
Symbol
pals1b
Name
(RefSeq) MAGUK p55 subfamily member 5b isoform X1
KO
K06091
MAGUK p55 subfamily member 5
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
137786005 (pals1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cana04990
]
137786005 (pals1b)
Domain-containing proteins not elsewhere classified [BR:
cana04990
]
PDZ domain-containing proteins
MAGUK family proteins
137786005 (pals1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
L27
SH3_1
PDZ_2
ZNHIT3_C
SH3_9
RhoGEF
Motif
Other DBs
NCBI-GeneID:
137786005
NCBI-ProteinID:
XP_068433691
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MIMSHMNGYVQEASGQAKNHRERAVDCPGDESCLVKSPHCSAHMERIQHYQEELKKRREE
DNRGKHDIDPNASLRLKKLSQNPKVGIDNPTFEGKENAIKDALSQDPVAELVELLQALKW
AHHCLTDAQSQQDVELITQLLAMEDFKNAYAIYVAVSQQMNRVIPTSPLTAQAEDLCQEV
QKILQSSQHKEGLELKTLLTNPHLQALMQAHDTVAGQEITEENLTQYIGETVKLVRLEKA
RDTPLGATVRNDMDSVLVSRVVKGGAAEKSGLLSEGDEILEINGISIRGKHVNEVHDLLQ
QMQGTLTFLLIPSSQIKPAAHRQTVMHVRAYFDYDPSDDPFVPCRELGLSFHKGDILHVI
SQDDPNWWQAYRDGDEDNQPLAGLIPGKSFQQQRETLKKTITDSSQEHHGRLWYAKKSKR
QKKKSISTLCRNIDYDDILTYEEMSLYHQPANRKRPIGLIGPTNSGHDELRRRLLSIEPE
KFAVAVPHTTRNSRIHERNGREYHFVSRPAFETDLASGKFIESGEYEKNLYGSSTDSVRH
VINSGRICLLCLHTKSLQVLRSSNLKPFVIFIAPPSQERLRTLLASDGKTPKPEELKEVI
EKAREMEQNFGHFFDATIVNMDPDQAFHELRRLIDKLDTEPQWVPTSWLC
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgtcccatatgaacggttacgtgcaagaggcctctggtcaggccaagaaccac
agggagagggcagtggactgtccaggggacgaaagttgcctcgtgaaatctccacactgc
agtgcccacatggagaggattcagcactaccaggaggagctcaagaagaggagagaggag
gacaacagggggaagcatgacatcgaccccaatgcttcactgagactcaagaagctgtca
caaaaccccaaggtgggcattgacaatcccaccttcgagggaaaggaaaatgccatcaaa
gatgcactctcccaggatcctgtcgcggaactggtggagttgttgcaggctctgaagtgg
gcgcaccactgcctgacggatgcgcagagccagcaggatgtggagctgataacgcagctc
cttgccatggaggacttcaagaatgcctacgccatctacgttgctgtatcccagcagatg
aacagagtcattcccacctcacccctcacagcgcaagcagaagatctctgccaggaggtc
cagaagattctccagtccagccaacataaggagggtttggagctcaagactctgctcacc
aatcctcatctccaggcactgatgcaggctcatgacactgtggcagggcaggaaataaca
gaagaaaatttgactcagtacattggagagacggttaaactggtgcggctggagaaggcc
cgtgacactccactgggtgcaacagtacgtaatgacatggacagtgtgctggtgagtcgt
gtggtgaaaggtggagcagcggagaagagcggccttctcagtgagggagatgagatcctg
gagatcaacgggatatccattcgtgggaagcacgtcaatgaagtccatgacttactgcaa
caaatgcaaggcactctgaccttcctcctcatcccgagctctcagattaaacctgccgca
cacagacagactgtgatgcacgtacgggcttactttgactacgacccctccgatgacccc
tttgtgccgtgtcgggagctgggcctgtccttccacaagggagacatcctccatgtcatc
agccaggatgaccccaactggtggcaggcctacagggatggagatgaagacaaccagcct
ctggctggactcattccaggaaaaagcttccagcagcagagagagaccttgaagaaaact
ataaccgacagtagtcaagagcaccacgggaggctttggtatgcaaagaaaagcaagaga
cagaagaagaagagcatttctaccttgtgcagaaacattgactacgatgacatcctgacc
tatgaggagatgtcactttatcaccagcctgccaatcgcaaacgccccattggtctgatt
ggtccgacaaacagcggtcacgatgagctgcgtcgacggcttctgtccatcgaaccggaa
aagtttgctgttgccgttccacacacaaccagaaactcaaggatacatgagcggaatggg
cgcgagtaccatttcgtgagtcggcctgcctttgaaaccgacttagcgtcgggaaaattc
attgagtcgggggaatatgagaagaacttgtacggctccagcaccgactcggttcgacat
gtcatcaactctggacgcatctgtttgctctgtctccacaccaagtcactgcaggtatta
cggtcctccaacctcaagcccttcgtcatcttcatcgctcctccttctcaggaacgacta
cgcaccctgctggcctcagacgggaaaacaccaaagccggaagagctaaaggaggttatt
gaaaaggcccgtgagatggagcaaaacttcggccacttctttgatgcaaccatagtgaac
atggatccagaccaggctttccacgagctgcgcaggctgatagacaagctggacactgag
ccacagtgggtgcccacctcttggctgtgctag
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integrated database retrieval system
