Clinocottus analis (woolly sculpin): 137786156
Help
Entry
137786156 CDS
T10471
Symbol
grin2ba
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04020
Calcium signaling pathway
cana04080
Neuroactive ligand-receptor interaction
cana04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
137786156 (grin2ba)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
137786156 (grin2ba)
04082 Neuroactive ligand signaling
137786156 (grin2ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cana04040
]
137786156 (grin2ba)
Ion channels [BR:
cana04040
]
Ligand-gated channels
Glutamate (ionotropic)
137786156 (grin2ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
137786156
NCBI-ProteinID:
XP_068433910
LinkDB
All DBs
Position
Unknown
AA seq
1723 aa
AA seq
DB search
MRLWPAKHKVLLSHLSTMPVSSPRGQAGASSSSSAAAAAPSVARAQERRVRPLHPPPPPS
LHRHASASHRLSLLLLLLCLLHLPPACHSRREKGGGGGGGGGAGGAGGGGGHHYIPIPQP
PPHHMALPNILRGLSIAVVLVGNSSDVALAGAREKEDFLHMAPNVEVLTMNETDPKSIIK
SICDLMTEHWLQGVVFGDDTDQEAIAQILDFISAQTHIPILGVRGGSSMIMAAKDDDSMF
FQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYYPGYQDFVTKVRSTIENSFVGWELEEVL
LLDMSVDDGDSKIQNQLKKLQSPVILLYCTKEEANTIFEVAHSVGITGYGYTWIAPSLVA
GDTIAVPAEFPTGLLSVSYDEWDYGLEARVRDGVAIITMATSAMVMDRGPHTLLKSECHG
APDKKTPISGNPNEVLRYLMNVTFEGRNLSFSEDGYQMHPKLVIILLNKERQWERVGKWE
NGSLSMKYHVWPRYELYGGAATREDDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRK
QLKTLNQTKDSGIYIKRCCKGFCIDILKKIAKQVKFTYDLYLVTNGKHGKKINGTWNGMV
GEVVLKNAHMAVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADV
WVMMFVMLLLVSAMAVFIFEYFSPVGYNRCLADGKEPHGPSFTIGKAIWLLWGLVFNNSV
PVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVTGLSDKKFQSPNDFS
PPFRFGTVPNGSTERNIRNNYPEMHGYMTKFHQRNVNEALQSLKAGKLDAFIYDAAVLNY
MAGRDEGCKLVTIGSGYIFATTGYGIAIQKESLWKRHVDLAILGLFGDGEMEELESLWLT
GICHHEKNEVMSSQLDIDNMAGVFYMLGAAMALSLITFICEHWFYWQLRFCFMGVCSGQP
GFVFSISRGIYSCIHGVQIEEKSSSALNSPSATMNNTHSNIMRLLRTAKNMASLSGVNGS
PHSALDFIRRESSVYDISEHRRSLAGHSDCKPPYLPEDNMFSDYISEVERTFGNLHPKDS
NLYQDHYLHHHGSTLGLSGPPVNRPHSLGSASSLEGGMFDCDSLGGGVAPIFTTQPCSAL
THRNMSKFDLLSGQTPPPSQGFKGGLPDLYGKFSFKGGASSSTFVPGHGYCGGRGEDEGN
IRSDVSDISTHTVTYGNLEGNAKKRKQYRDSLKKRPASAKSRRELDEIELGYRRKPYHIS
HHHYHGHRSTSPPLLPAERKRGGGGGGNDGNTYIFREKESVRDFYLDQFRPKEGVPQWEH
VDLTEGPGSRDIGGPCTTLVPVDDFLKSKPKKPDPKGVGGSGLAGGEWECRNCRASGVGV
GKQMSMHGGGGYGGGMNCGSSGGGGNSRPSSATCMRCEGCKKTGNLYDISEDNNHLLEQM
GGGGGGGGMGAGPQSQSQGQQRRKGGGFGKPLRRQHSYDAFVDLQKEESGGMGSLMGGLG
GGGGMSGPGMGGMLPPPRSVSLKEKERYMEGTSPFAHIFERHGGSERERERDRDPLFYGG
EGRKRPGSPFGLFRGGEGLHRRSVGERDMRDRDRSLMEGGGGFSLSKSLYPDRVNQNPFI
PTFGDDQCLMHGAKQYYMKKQQQQQQVAKNSRSDFRSQMSTTSYLPASATAGVMSNVTPR
FPKELSLGGMNHHGSMLGVGPPRPFNGSNGHVYEKLSSIESDV
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atgagactttggccggcaaaacacaaggtactactctcccacctctccaccatgcctgtc
tcttcgcctcgcggccaggcaggggcctcctcctcctcctccgccgccgccgccgccccc
tcggtcgcccgggcgcaagagaggcgggtccgccccctgcatccacctccgcctccgtcg
ctccaccgccacgccagcgcctctcaccgcctctcccttctcctcctgctgctctgcctc
ctccacctgcccccggcctgccactcgcggagggagaagggcggcggcggcggcgggggc
ggcggggccggcggggcaggcggtggcggcggccaccactacatccccataccccagccg
cctccccaccacatggcgctgcccaacatcctgcgtggcctcagcatcgccgtcgtcctg
gtgggcaactccagcgacgtggcgctggccggggcccgcgagaaggaggacttcctccac
atggcgcccaacgtggaggtgctgaccatgaatgagacggaccctaagagcatcatcaag
agcatctgcgacctcatgacggagcactggctgcagggcgtggtgttcggggacgacacc
gaccaggaggccatcgcccagatcctggacttcatctcagcccagacccacatccccatc
ctcggagtccgcggaggctcctccatgatcatggctgccaaggacgacgactccatgttc
ttccagttcggcccctccatcgagcagcaggcctcggtcatgctgaacatcatggaggag
tacgactggtacatcttctccatcgtcaccacgtactacccgggttaccaggactttgtc
accaaggtccgcagcaccatcgagaacagcttcgtgggctgggagctggaggaggtctta
ctgctggacatgtcggtggatgacggagactccaagatccagaaccagctgaagaagctc
cagagccccgtcattcttctctactgcacgaaagaggaggccaacaccatcttcgaggtg
gcccactctgtcggcatcaccggctacggctacacgtggatagcgccctcgctggtagct
ggagacactatcgcagtgcctgcagagttccccacagggctgctctccgtgtcctatgac
gagtgggactacggcctggaggcccgcgttcgcgacggcgtggccatcatcacgatggcg
acctccgccatggtgatggaccgcgggccgcacaccctgctgaagtccgagtgccacggg
gccccggacaagaagacccccatctcaggcaaccccaacgaagtgctcaggtacctgatg
aatgtgacgttcgaggggcgtaatctgtcgttcagcgaggacggataccagatgcacccc
aagctggtcatcatcctgctcaacaaggagcggcagtgggagagggtgggtaaatgggag
aacggctccctgtccatgaagtaccacgtgtggcctcgctacgaactctacggcggcgcg
gccacgcgcgaggacgaccacctgtccatcgtgacgctggaggaggcgccgttcgtcatc
gtggaggacgtggatccgctgagcgggacctgcatgaggaacaccgtgccctgtcgcaag
cagctcaaaacactcaaccagacgaaggactcggggatctacatcaagcgctgctgcaag
ggattctgcatcgacatcctgaagaagatcgccaagcaggtgaagttcacctacgacctc
tacctggtcaccaacggcaagcacggcaagaagatcaacgggacgtggaacggcatggtg
ggcgaggtggtgttgaagaacgcccacatggccgtcggctccttgaccatcaacgaggag
aggtcggaggtcatcgacttttccgtgcccttcatcgagacgggcatcagcgtcatggtc
tcccgcagcaacggcacggtgtcgccctcggccttcctcgagcccttcagcgcggatgtg
tgggtgatgatgttcgtgatgctgttgctggtgtcagcaatggctgtgtttatattcgag
tacttcagccctgtgggctacaaccgctgtctggctgacggcaaagagcctcacggtcca
tccttcaccatcggtaaggccatctggctgctgtggggtctggtcttcaacaactccgtg
ccggtgcagaaccccaaaggcaccaccagtaagatcatggtgtccgtgtgggccttcttc
gctgtcatcttcctggcctcctacacggccaacctggcggccttcatgatccaggaggag
tacgtggaccaggtgaccggtctgtctgacaaaaagttccagagtcccaacgacttctcg
cctccgtttcggttcggcaccgtcccgaacgggagcacggagagaaacattaggaacaac
tatccggaaatgcacggctacatgacaaagttccatcagagaaacgtcaacgaggctctg
cagagtctcaaggccggcaaactagacgctttcatttacgacgcggccgtactcaactac
atggccggcagggacgagggctgcaagctggtgaccatcggcagcggctacatcttcgcc
accacgggctacggcatcgccatccagaaggagtcgctgtggaagaggcacgtggacctg
gccatcctggggctctttggagacggtgagatggaggagctggagtccctgtggctgacg
gggatctgccaccacgagaagaacgaggtgatgtccagccagctggacatcgacaacatg
gccggcgtcttctacatgctgggtgccgccatggcgctgtcgctcatcaccttcatctgc
gagcactggttctactggcagctgcgcttctgcttcatgggcgtctgctccggccagccc
ggcttcgtcttctccatcagcaggggcatctacagctgcatccacggggtgcagatcgag
gagaagagcagctcggcgttgaactcgccatcagccaccatgaacaacacccactccaac
ataatgcgcctcttgcgcaccgccaagaacatggcgtccctgtcgggggtgaacggctcc
ccgcacagcgccctggacttcatccgccgcgaatcctccgtttacgacatctccgaacac
cggcgcagcctggcgggccactcggactgcaagccgccgtacctgccggaggacaacatg
ttcagcgactacatcagcgaggtggagcggacgttcggcaacctccacccgaaggacagc
aacctgtaccaggaccactacctgcaccaccacggctccacgctcgggctcagcgggccg
ccggtcaaccggccccacagcctgggcagcgccagctctctggagggcggcatgttcgac
tgcgacagcctgggcggaggggtggccccgatcttcaccacgcagccctgctccgcgctg
acccacaggaacatgagcaagttcgacctgctgtcgggacagactcctcccccgagccag
ggcttcaagggagggctgccggacctgtacgggaagttctccttcaagggaggcgcctcc
agctccacattcgtcccggggcacggctactgcggagggagaggagaggacgaggggaac
atacggtccgacgtctcggatatttccacgcacacggtcacttacggaaacctggagggg
aacgccaagaagcgcaagcagtaccgcgacagcctgaaaaagaggccggcctctgccaag
tccagacgggagctggacgagatcgagctgggctacaggaggaaaccctaccacatcagc
caccaccactaccacggccaccgctccacctccccaccgcttttgcccgccgaacggaag
agaggaggaggtggaggtggaaacgatgggaacacctatatcttcagagaaaaggagagc
gtgagagatttctatttggaccagtttcggcccaaagagggcgtccctcagtgggaacac
gtggacctgacggagggccccgggagtcgggacatagggggtccctgcaccaccctggtg
ccagtggacgacttccttaagagcaaacccaaaaagccagatccgaagggtgtgggagga
tctgggctggcagggggagagtgggagtgcaggaactgccgggccagcggggtgggagtg
ggcaagcagatgtccatgcacggaggcggagggtacggcgggggcatgaactgcgggtcc
tcgggaggcggaggaaacagccgccccagctccgcgacctgcatgcgctgcgagggctgt
aaaaaaaccggaaacctctacgatatcagcgaggacaacaaccacctcttggaacagatg
gggggaggcggaggtgggggagggatgggcgcgggccctcagtctcaatctcagggccag
cagaggaggaagggcggaggcttcggcaagccgctgaggcggcagcactcgtacgacgcg
tttgtcgaccttcagaaggaggagtcgggcgggatggggagtttgatggggggcctcgga
ggcggcggagggatgagcggccccggtatgggagggatgctgcccccgcccaggagcgtc
agcttgaaggagaaagaacgctacatggagggcaccagccccttcgcgcacatatttgag
cgccacgggggctcggagagagaaagggagcgagacagggacccgttgttttacggaggg
gagggccgcaaaagacccggctcgccattcggcctgttcagaggcggcgagggcctccac
cggcgctccgtgggagagagagacatgcgagaccgggataggtctttgatggaaggagga
ggcgggttctccttatccaaatcgctttaccccgacagggtgaaccaaaacccctttatt
cccacgttcggcgacgaccagtgtctgatgcacggggccaaacagtattacatgaagaag
caacagcagcagcaacaagttgccaaaaacagccgaagtgacttcaggagccagatgagc
acgacgtcgtacctgccggcgtccgccacagccggcgtgatgtccaacgtgaccccccgg
ttcccgaaggagctcagcctcggtggcatgaaccaccacggctccatgctgggggtcggg
cccccgcggcccttcaacggaagcaacggccatgtgtacgagaaactctccagcattgag
tcggacgtgtga
DBGET
integrated database retrieval system
