Clinocottus analis (woolly sculpin): 137786201
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Entry
137786201 CDS
T10471
Symbol
smarca4a
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
cana03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137786201 (smarca4a)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
137786201 (smarca4a)
Chromatin remodeling factors
BAF complex
137786201 (smarca4a)
PBAF complex
137786201 (smarca4a)
GBAF(ncBAF) complex
137786201 (smarca4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137786201
NCBI-ProteinID:
XP_068434006
LinkDB
All DBs
Position
Unknown
AA seq
1658 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGSMMGPSPGPSPGSAHSMMGPSPGPPGSGHPHPPQG
PSGYPQDNMHQMHKPMEAMHEKGMPDDPRYAQMKGMGMRPGGHSGMGPPPSPMDQHSQGY
PSPLGGSEHAPSPVPANGPPSGPMMPGGPPGPGAGPMENSGDPNQGMGQPNRGVPQGPGG
PSVVGGGPGGAGGPAPFNQNQLHQLRAQIMAYKMLARSQPLPDHLQMAVQGKRPMPGMQQ
QPMPNMPLSTGPGVGPGAVPGPGQANYNRPHGMVGPNMVPPGPAGIPPGMQGPPTNGPPK
SWPEGPMVNAAAPSNPPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPAQPPPM
MLHQKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIE
LKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIE
QERKRRQKHQEYLNSILQHAKDFKEYHRSITAKLQKATKAVATYHANTEREQKKENERIE
KERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTDLVRAHKAVQALKDKKKK
KKKKKPAPQEGGTLSLGPDGEPLDETSQMSDLPVKVIHVDSGKVLTGMEAPKAGQLETWL
ETNPGYEIAPRSDSEESGSEEEEDEEEDEEEEQPHSSATLAAAAAAAAAAAADAAAAAEE
KKKKLMTNPEEVDVMHIIENAKQDVDDEYGSASFNRGLQSYYAVAHAVTETVEKQSSLLV
NGQLKQYQVKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPFLIIV
PLSTLSNWVYEFDKWAPSVVKISYKGSPAARRAFVPILRSGKFNVLLTTYEYIIKDKQVL
AKLRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNFLLP
TIFKSCTTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE
KVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPY
MFQHIEESFSEHLGHTGGVVSGAELYRSSGKFELLDRILPKLRATDHKVLLFCQMTTLMT
IMEDYFAFRGFKHLRLDGTTKAEDRGMLLKTFNDPASDYFVFLLSTRAGGLGLNLQSADT
VIIYDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQ
AGMFDQKSSGCERRAFLQAILEHEEQDEVGAQEGSRSRSQWEEDEVPDDETVNQMIARSE
EEFELFMRMDLDRRREEARNPKRKPRLMEENDMPSWILKDDAEVERLTCEEEEEKMFGRG
SRQRKEVDYSDSLTEKQWLKAIEEGNLEDIEEEVRHKKTTRKRKRDRDHDGPATPSSSSG
RGRDKDDDVKKAKKRGRPPAEKLSPNPMSLTKKMKKIVDAVIKYKDGSNGRQLSEVFIQL
PSRKELPEYYELIRKPVDFRKIKERIRSHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYE
DSIVLQSVFTSVRQKIEKEDESEGEESEEEEDDLDEGSESESRSVKVKIKLSRKEKGDRG
GKGQRRRGRGARAKPVVSDDDSEEEQEEERSASGSEED
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccctgaccccccgatgggagggacacctcgcccgggaccctccccaggccca
gggccatctccgggaagcatgatgggcccgagccccggtccctctcccggctcagcccac
agcatgatggggcccagtccaggacctcctggatctggacacccgcaccctccacaggga
ccatcaggatatcctcaggacaacatgcaccagatgcacaaacccatggaagccatgcat
gagaaggggatgcccgatgacccccgctacgctcagatgaagggcatgggcatgagacca
ggcgggcacagtgggatgggaccccctccgagcccaatggaccaacactcccaaggatat
ccctctccattgggaggctcggagcacgcgcccagccccgtccccgccaacggccctccc
tctggccccatgatgcccggaggcccccccggccccggggctggcccgatggagaacagc
ggagacccgaaccagggaatgggtcagcctaaccgcggggtccctcagggcccaggcgga
cccagcgtcgtcggaggtggacccggcggcgctggcgggcccgcgcccttcaaccagaac
cagttgcaccaactcagggctcagatcatggcctacaagatgctggcacgcagtcagccc
ttaccggaccacctgcagatggccgtgcaggggaagaggcccatgccggggatgcagcaa
caaccgatgcccaacatgccgctgtccacggggcctggtgttgggcctggagctgttcca
ggacccggtcaggccaactacaaccgaccacacggcatggtgggtcctaacatggtgcct
cctggacctgcaggaatccccccgggtatgcaaggcccgcctaccaacggaccccctaaa
tcatggcctgaagggccaatggtgaatgccgctgccccctccaaccctccacagaagctg
attccaccgcagcccaccggcagaccctcacccgctcccccctccgttccccccgccgcc
tcccccgtgatgccccctcagacacagtccccaggacagcccgcccagccacctcccatg
atgcttcaccagaagcagaaccgcataactcccatccaaaagccccgtgggctggacccg
gtggagatcctccaggagcgagagtacaggctacaggctcgtattgctcaccgtatccag
gagctggagaacctgcctggctctctcgccggtgacctgcgcacgaaagccaccatcgag
ctcaaggccctgaggttgcttaacttccagagacagctgcgtcaggaggtggtggtctgc
atgcgccgcgacaccgctctggaaactgccctcaacgccaaggcctacaagcgcagcaag
cggcagtcgctgcgcgaagctcgcatcaccgagaagcttgagaagcaacagaagattgaa
caggaaaggaaacgtcgccagaaacaccaggaatacctcaacagcatcctgcagcacgcc
aaggatttcaaggagtaccaccgctccatcaccgcgaagctccagaaggccaccaaagcc
gtcgccacctaccatgccaacaccgagcgcgagcagaagaaggagaacgagcgcattgaa
aaggagaggatgcggaggctgatggccgaagatgaagaaggctaccgtaaacttatcgac
cagaagaaagacaagcgtctggcctacctgctgcagcagacggacgagtacgtggccaac
ctcactgacctggtccgcgcccacaaagctgtgcaagctctcaaagacaagaagaagaag
aagaaaaagaagaagccagcgcctcaggagggtggcactctcagcctgggacctgatgga
gagcctctggatgagaccagtcaaatgagcgacctgccggtgaaggtcatccacgtggac
agtgggaaggtcctgaccgggatggaagcaccgaaggctggccagctggagacctggctg
gaaacgaacccagggtatgaaatagcaccgcgctccgacagcgaagaaagcggttcagag
gaggaggaggacgaagaggaggatgaagaagaggagcaacctcattcctctgcaactcta
gcggcggcagcagccgcagcagcagctgcagccgccgacgcggctgcagcagcagaggag
aagaagaagaagttgatgaccaaccctgaggaagtggatgtcatgcacatcatcgaaaac
gccaagcaggatgtcgatgacgagtacggcagtgcgagtttcaaccgaggcctgcagtcc
tactacgctgtggcacacgccgtcaccgagacggtggaaaagcagtcctcgctgctggtc
aacgggcagctcaagcaataccaggtcaaaggtttggagtggctggtgtcgctttacaac
aacaacttgaacggcatcctggcagatgagatgggtctgggcaaaacgatccagaccatc
gccctcatcacttacctcatggagcacaagcgcctcaacgggcccttcctcatcattgta
cctctctcaactctatcaaactgggtctacgagtttgataagtgggccccgtctgtcgtg
aaaatctcctacaaggggtctccagctgctcgtcgcgcattcgttcccatcctgcgcagc
ggcaagttcaacgtgctgctcacaacgtacgagtacattatcaaagacaagcaggtgcta
gcaaagctccgctggaagtacatgatcgtggacgagggccatcgcatgaagaaccaccac
tgtaagctgacccaggtgctgaacactcactacttggccccgcgccgcgtgctgctcacc
ggcactccgctgcagaacaagctgcccgagctctgggccctgctcaacttcctgctgccc
accatcttcaagagctgcaccacgttcgagcagtggttcaacgcccccttcgccatgacc
ggcgagaaggttgacctgaatgaagaagagaccattctgatcattcgccgtttacacaag
gtgctcaggccgttcctgctgcgccgactcaagaaagaagtcgaggctcagctaccagag
aaggtggagtacgtgattaaatgcgacatgtcagccctgcagagggttttgtacaggcac
atgcaggctaagggagtgctgctcacagacggctcagaaaaagacaaaaagggtaaaggt
ggcacgaagaccctgatgaacacgatcatgcaactgagaaagatctgcaaccacccctac
atgttccagcacatcgaggagtctttctccgagcatctcggccacaccggtggagtcgtg
agcggcgctgaactgtaccgctcctccgggaagtttgagctactggaccgcatcctgccc
aagctgagggccaccgaccacaaagtgctgctcttctgtcaaatgaccacgctcatgacc
atcatggaggactactttgccttccgcggcttcaagcacctgcgtctggacggaaccacc
aaggcagaggaccgcggcatgctgctgaagacgttcaatgacccggcctcggactacttt
gtgttcctgctcagcaccagagccggaggcctgggcctcaacctgcagtctgctgacacc
gtcatcatctacgacagcgactggaacccacatcaggacctgcaagcccaggaccgagcc
caccgcatcggtcagcagaacgaggtgcgcgtgctccgcctctgcaccgtcaacagcgtg
gaggagaagatcctggcggcggccaagtacaagctgaacgtggatcagaaggtcatccag
gccggcatgttcgatcagaagtcgtccggctgcgagcgccgcgccttcctgcaggccatc
ctggagcacgaggagcaggacgaggtgggggctcaagaaggaagccggtccagaagccag
tgggaggaagacgaagtgcccgatgatgaaactgtcaatcagatgatagccagaagtgaa
gaggagtttgaactgttcatgcgcatggatctagacagacgccgcgaggaggcccgcaac
ccgaagaggaaaccccgtctgatggaggagaacgacatgcccagctggattttgaaagac
gacgccgaagtcgagaggctaacttgcgaagaagaggaggagaagatgttcggcagagga
tctcgccagcgtaaagaggtggactacagcgactcgctgactgagaaacagtggctcaag
gccatagaggagggaaatctcgaggacatcgaagaggaagtgcgccacaaaaagacgacc
aggaagcgtaagagggaccgcgaccacgacggcccggccacacccagctccagcagcggc
cgcggccgcgacaaggacgacgacgtgaagaaggccaagaagcgcggccgcccgcctgcc
gagaagctctcccccaaccccatgtccctcacgaagaagatgaagaagatcgtcgacgcc
gtcatcaaatataaggacggtagtaacgggcgacagctgagcgaagtcttcatccagctg
ccgtctcgcaaggagctgcccgagtactacgagctcatccgcaagccagtggacttcagg
aagatcaaggagaggatcaggagccacaagtaccgcagcctgaacgacctggagaaggac
gtgatgctgctgtgtcaaaatgcccagacgttcaacctggagggctctctgatatacgag
gactccattgtgctgcagtccgtcttcaccagcgtgaggcagaagatcgagaaggaggac
gagagcgaaggagaggaaagtgaagaagaggaggatgacctagacgaaggctctgagtct
gaatctcgttcagtgaaggtgaagatcaagctgagccggaaagaaaagggggatcgaggc
gggaaaggacagcgacggaggggccggggggcccgggctaaaccggtggtgagcgacgat
gacagcgaggaggaacaggaagaggagcgttcggccagcggcagcgaggaggactga
DBGET
integrated database retrieval system
