Clinocottus analis (woolly sculpin): 137786364
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Entry
137786364 CDS
T10471
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04010
MAPK signaling pathway
cana04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
137786364 (cacna1ha)
04020 Calcium signaling pathway
137786364 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cana04040
]
137786364 (cacna1ha)
Ion channels [BR:
cana04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
137786364 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
137786364
NCBI-ProteinID:
XP_068434295
LinkDB
All DBs
Position
Unknown
AA seq
2529 aa
AA seq
DB search
MTDGEGRVRFQYAESPEGREEVRLAIPPAFRSDAPGHDADPGGGGGGGHDDEDEEEEERS
RSRSRRRRRCSGRGDGADEWSPEVQERDHREPEPDAEVGPTPTPPPAPPLLGVRIRAPVR
DPDCVSEEEEQQQPYPALAPVAFFCLKQTSRPRNWCLRVVCNPWFEHVSMLVILLNCVTL
GMFQPCEDVTCESEWCRILQVLDDCIFAFFAVEMVIKMVALGIFGPNCYLGDKWNQLDFV
IVMAGVMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLC
FFVFFIFGIVGVQLWAGLLRNRCFLQEDIRTTYNLSISPYYMSEEGEDSPFICSTPRENG
MLRCHNVPPTAEGGADCLLAAPSPASNNGCVNWNQYYSVCRPGDLNPHKGAVNFDNIGYA
WIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQ
RENALMREQRARYMSNDSTLASYSEPGSCYEEMLRYISHLYRKFTRRLQRIYSGWHSKRR
KKVNPNGSGGGSNGGGNGHGSSRGGGLGPGSALWLRPIHNLLQHHQHQHCRLSNGGQHTA
AAAAADGEAGGEEALEMKSLPVRRGSAAAAAAGGNGHGGEDQGGMGALLGRLNGGMNYPT
ILPSFVCSYSSKTPPPHCKQSGPEPQNHPEHTETLNKLYQLMGQHSRQRLLYQLAGVVPS
PLLLELLSCPLCARSLETLELELGDLEGGRGEADGLHDFPQVRPHGAALVTMMMGGDLRG
GRGRCRRRGVAACRNGVVAAWVGFRDRLKRIVESKYFNRGIMIAILVNTLSMGIEYHKQP
EQLTDVLEISNIVFTSMFVLEMGFMLLAFGLFGYIRNPYNIFDSVIVIISVWEIIGQADG
GLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGMHLFG
CKFSIQTENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWAALYFVAL
MTFGNYVLFNLLVAILVEGFQAEGDANRSESDDEKKSDNFEEDEKVEQLRDTELKMYSLM
MTANGHVDPRGSMAPPIIMRTAATPMPTPKSSLGPESVLGEEPAYGDAAAAAAAGVCVPQ
YGEAGLGFCDAESRRGSSASMDPSAYDQRSLGLSSPGRRSPLPPRSWGSRRSSWNSLGRA
PSLKRRDTSGERESLLSGEGGGGGGGGGGGGGEEEEEEDVVAGDAGVHNRLRPESLELLQ
ASALCASGAAEYGDCNGRTLTYDANAEPKDDSSPEDDVDDDSSFWFWLKKEILDMKPRWC
KEHEDWNMYLFSPENKLRGWCQSVISHKLFDHVVLVFIFLNCITIALERPDINVKSKERV
FLSVSNYVFTVIFLAEMAIKVVALGFCFGKQTYLQSSWNVLDGLLVFVSLVDILVSLAYT
RGNRILGILRVLRLLRTLRPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGI
LGVQLFKGKFYHCEGLDMKNVTNRSDCLQANYRWIRRKYNFDNLIQALMSLFVLSCKDGW
VNIMYDGLDAVGVDQQPVRNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQE
EEETRLREEKRLKMIEKKRRSKEIGGAEAKQRPYYADYSPLRLSIHTLCTSHYLDLFITF
IICINVFTMSIEHYHQPKYLVEVLKYCNYVFTCIFVVEALLKLAAFGIHRFFKDRWNQLD
IAIVALSIVGITLEELKMSAALPINPTIIRIMRVLRIARVLKLLKMATGMRSLLDTVMQA
LPQVGNLGLLFMLLFFIYAALGVELFGKLECTEHNPCEGLSRHATFENFGMAFLTLFRVS
TGDNWNGIMKDTLRECHEGERYCLTYLPLVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEE
SNKEAKEDAEMDAEIALEMAMERERKLSTTSNNSSTGGTYVGPCPHSPGQEEEVQYGDLL
TSRKMSVSRMHSLPNDSYMFRPVRPASAPYPLEEVELSPQHHHHQQQQQQQQHAGSVTSV
RSQPCESRALLRLPDVSPVLPRPPPSIALPRIAPPTPTPGPSPLALRREVAVKLDSVESQ
SCEQQERPNSVHPPPLSPQNSSPFPLPPPPPPSSPSALPLPPSSPAAFPPPPSPSSLHPL
LSSPSSLPPPPSSPTLLLPPPPPSPRLPLRPASLRRPRPPSAVSLCDPADEEVSHITSAA
RHRRRHEEERGSGQESGRSHSLSPYAAPHSLNSSSSSSPSHPPPPLPPSSSRSALGKDPS
AFQDEPPSDDQRRHSIEVCFLQTDQLFARAEKGGGGMPAFPVRVQSVGGGHRKKKMSPPC
ISIHPPCEREHPQLAPSPKPSDCSTLLRRRTPSYDLSPHAQSEDSQARSPALTPVHASVS
SQQQLLPTPSPSPASTPTRSRPSYAATPPTPHIPISPNVFIQPHAPLVPRPFSQAHSLSP
AARLPSLSAEYIPLPQFTFDQPQSRYMSGLSPGLSDGDAASCSSASSSPFDNRLGGAAGF
SAKNRRTAQ
NT seq
7590 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaggggagagtgcgctttcagtacgcagagagcccggaggggcgggag
gaggtgaggctcgccataccgccggccttcaggagcgacgccccgggtcacgatgctgac
cccggaggaggaggaggaggagggcacgacgacgaggacgaagaggaggaggagaggagc
aggagcaggagcaggaggaggaggcggtgctccggccgcggagacggagccgacgagtgg
agccccgaggtccaggagcgcgaccaccgggagcccgagccggacgcggaggtcggaccg
acgccaacgccgccgccggcgccgccgctgctcggggttcgcatccgggctcccgtccgc
gacccggactgcgtctccgaggaggaggagcagcagcagccgtacccggcgctggccccc
gtggccttcttctgcctgaagcagacctccaggccgcgcaactggtgcctccgcgtggtc
tgcaacccgtggttcgagcacgtgtccatgctggtcatcctgctgaactgcgtgactctg
gggatgttccagccctgcgaagacgtcacctgcgagtcggagtggtgccgcatcctgcag
gtattggacgactgcatcttcgctttcttcgccgtggaaatggtcatcaagatggtggcc
ctgggaatctttggccccaactgttacctcggggacaagtggaaccagctcgacttcgtc
atcgtcatggcaggggtgatggagtactctctggacggccacaacgccagtctgtcggcc
atccggaccgtccgggtgctccggcctctgcgggccatcaacagagtaccaagtatgcgg
atcttggtgacgctgctgctggacaccctgcccatgctggggaacgtcctcctcctctgc
ttcttcgtcttcttcatcttcggcattgtgggagtccagctgtgggcgggactattgcgc
aaccgctgcttcctgcaagaggacatcagaacaacgtacaacttgtccatcagtccgtac
tacatgtcggaggaaggtgaagacagcccgttcatctgctcgactccccgcgagaacggg
atgctgcgctgccacaacgtgccgcccaccgcggagggcggggccgactgcctgctggcc
gcgccgagtccggccagcaacaacggctgcgtgaactggaaccagtactacagcgtgtgt
cgccccggggacctgaacccgcacaagggagctgtcaacttcgacaatatcggctacgcc
tggatagccatattccaggtcatcactctggagggatgggtagatatcatgtactatgtc
atggacgctcactccttctacaattttatatattttatactgctcattatcgtgggctct
ttcttcatgatcaacttgtgcctcgtggtcatcgccacccagttctccgagacgaagcag
cgggagaacgccctgatgcgggagcagcgcgcccgctacatgtccaacgactccacgctg
gccagctacagcgagccgggctcgtgctacgaggagatgctacgctacatcagccacctc
tatcgcaagttcacgcgcaggctgcagaggatatactccgggtggcacagtaaaaggcgc
aaaaaggtgaatcccaacggcagcggcggcggcagtaacggcgggggcaacgggcacggc
tccagccggggcggcggcctgggccccggcagcgccttgtggctgaggccgatccacaac
ctcctgcagcaccaccagcaccagcactgccgcctcagcaacggggggcagcacacggcg
gcggcggcggcggcggacggggaggcgggaggcgaggaggcgctggagatgaagtcgctg
ccggtgcggcgggggagcgccgccgccgccgccgccggcgggaacggccatggcggggag
gaccagggcggcatgggggcgctgctgggccggctgaacgggggcatgaactacccgacc
atcctgccgtccttcgtgtgcagctacagcagcaagacgccgccgccgcactgcaagcag
agcggcccggagccgcagaaccacccggagcacacggagacgctcaacaagctctaccag
ctcatggggcagcacagccgccagaggctgctgtaccagctggcgggcgtggtgcccagc
cctctgctcctggagctgctcagctgcccgctgtgcgcccgcagcctggagaccctggag
ctggagctgggagacctggagggaggccggggagaggcggacggactgcacgacttcccc
caggtcagaccgcacggggccgcactagtgacgatgatgatgggcggcgatctgagaggc
gggcgaggtcggtgccggcggcgaggggtcgcggcgtgcaggaacggcgtggtggcggcc
tgggtgggcttcagggaccggctgaagaggatcgtggagagcaaatacttcaaccggggg
atcatgatcgccatcctggtcaacacgctgagcatgggcatcgagtaccacaagcagccc
gagcagttgacggacgtgctggagatcagcaacatcgtcttcaccagcatgttcgtgctg
gagatgggcttcatgctgctggcgttcggcctgttcggatacatcaggaacccgtacaac
atcttcgacagcgtcatcgtgatcatcagcgtgtgggagatcatcggtcaggccgacggc
gggctgtcggtgctgcgtaccttccggctgctgcgggtcctgaagctggtccgcttcctg
ccggcgctgaggaggcagctggtggtgctgatgaagaccatggacaacgtggccacgttc
tgcatgctgctgatgctcttcatcttcaccttcagcatcctggggatgcatctgttcggc
tgcaagttcagcatccagacggagaacggagacaccatccccgaccgcaagaactttgac
tctctgctctgggccatcgtcactgtgttccagatcctcacccaggaggactggaacgtg
gtgttgtacaacggcatggcctccacctctccgtgggcggcgctctactttgtcgccctc
atgactttcggcaactacgtgctcttcaatctgctcgtggccatcttggtggagggcttc
caggccgagggcgacgctaatcggtcggagtcggacgacgagaagaaatctgacaacttc
gaggaggacgagaaggtggagcagctcagagacaccgagctgaagatgtactctctgatg
atgacggccaacggtcacgtggacccgcgcggctcgatggcgccgccgatcatcatgcgc
acggccgccaccccgatgccgacgcccaagagctcgctgggccccgagtcggtcctgggg
gaggagccggcgtacggggacgcggcggcggcggcggcggcgggcgtgtgcgtgcctcag
tacggcgaggccgggctggggttctgcgacgccgagtcccgccgcggaagctccgcctcc
atggacccttcggcgtacgaccagcgctctctgggtctctccagtcccggccggcgctcc
cccctccctccccgctcgtgggggagccggcgctccagctggaacagcctgggccgagcg
ccgagcctcaagaggcgcgacaccagcggggagagggagagcctgctgtccggggagggc
ggcggcggcggcggcggcgggggtggaggaggcggcgaggaagaggaagaagaagatgtg
gtcgcgggggacgccggcgttcacaaccggctgcggcccgagtcgctggagctgctgcag
gcgtcggcgctctgcgcgtccggcgcggcggagtacggcgactgcaacggacgcacgctg
acctacgacgccaacgccgagcccaaggacgactcctcgccggaggacgacgtcgacgac
gacagctcgttctggttctggctgaagaaagagattctggacatgaagcctcgctggtgc
aaagaacacgaggactggaacatgtatttattctctccagagaacaaactccgcggctgg
tgccaaagtgtgatctcgcacaaattgttcgaccacgtggttcttgtcttcatcttcctc
aactgcatcaccatcgctctggaaagacccgacatcaatgtcaaaagcaaggagcgagtg
tttctcagtgtgtccaactacgtgttcactgtgatcttcctggcagagatggccatcaag
gtggtggcgctggggttctgcttcgggaagcagacgtacctgcagtccagctggaacgtc
ctggacggcctgctggtgttcgtgtctctggtggacatcctggtctcgctggcttacacc
cgcgggaaccggatcctgggcatcctgagagtcctgcggctgctgcggaccctccgccca
ctgagggtgatcagccgcgctccgggcctgaagctggtggtggagacgctcatcacctcc
ctccgacccatcggcaacatcgtcctcatctgctgcgccttcttcatcgtcttcggcatc
ctgggggttcagctgttcaaggggaagttctaccactgtgaaggtctggacatgaagaac
gtcaccaacaggtcggactgcctgcaggccaactaccgctggatacgcaggaagtacaac
tttgacaacctgattcaggctctgatgtctctgttcgtgctgtcctgtaaggacggctgg
gtcaacatcatgtacgacgggctggacgccgtgggagtggaccagcagcccgtgaggaac
cacaacccctggatgctgctctacttcatctccttcctcctcatcgtcagcttcttcgtg
ctcaacatgttcgtgggcgtggtggtggagaacttccacaagtgccggcaggaccaggaa
gaggaggagacccgcctgcgggaggagaagaggctcaagatgatagagaaaaagcgcagg
agtaaggagattggaggagctgaggccaagcagaggccgtactacgccgactactccccg
ctgcgcctctccatccacacgctgtgcaccagccactacctggacctcttcatcaccttc
atcatctgcatcaacgtcttcaccatgagcatcgagcactaccaccagcccaagtatcta
gtggaggttctgaagtactgtaactacgtgttcacctgcatcttcgtcgtggaggcgctg
ctcaaactcgcggcgttcggcatccaccgcttcttcaaagacaggtggaaccagctggac
atcgccatcgtggcgctgtccatcgtgggcatcaccctggaggagctgaagatgagcgcg
gcgctgcccatcaaccccaccatcatccggatcatgagggtgctcagaatagcacgagtg
ctgaagctcctgaagatggccactgggatgcgatccctgctggacaccgtcatgcaggcg
ctgccgcaggtgggaaatctgggcctcctcttcatgctgctcttcttcatctacgccgcg
ctgggagtggagctctttggcaaactggagtgcaccgaacacaacccgtgcgagggcctg
agtcgccacgccaccttcgagaacttcgggatggctttcctgacgctgttccgggtgtcc
acaggagacaactggaatgggattatgaaagacacgttaagggagtgtcacgaaggagag
cgctactgtctcacgtacctgcctctggtctccccgatctacttcgtcacgttcgtgctc
atggcccagttcgtgctggtcaacgtggtcgtggccgtgttgatgaaacacctggaggaa
agcaacaaggaggcgaaagaggatgcggagatggacgcggagatcgccttggagatggcg
atggagagggagcgcaagctgagcacgacctccaacaacagctcgacggggggaacctac
gtcgggccgtgcccgcactcacctggacaggaggaagaggtgcagtacggagacctgctg
acgtccaggaagatgtccgtctccaggatgcactctctgcctaacgacagctacatgttc
cggcccgtgcggcccgccagcgccccctacccgctggaggaggtggagctcagcccgcag
caccaccaccaccagcagcagcagcagcagcagcagcacgcaggctcggtgacgtcggtt
cgctcgcagccgtgcgagagccgcgcgctgctgcggcttcccgacgtctcccccgtcctc
ccccggccgcctccctccatcgcgctgccccgcatcgccccgcccacgcccacgcccggc
ccctcgccgctggccctgcgccgagaggtggcggttaaactggattctgtggagtcgcag
agctgcgagcagcaggagaggcccaactcggtccacccgcctcccctttctcctcagaac
tcctcccccttccccttgcctcctcctcctcccccctcctcgccctcggccctccccctg
ccgccctcctcccccgccgccttccctcctcctccctctccgtcctctctgcacccgctg
ctgtcctccccgtcgtccctccctccgccgccgtcctccccgacgctcctcctcccgccg
ccgcctccctcgccccgcctccccctgcgccccgccagcctccggaggccccgccctccc
tcggccgtctccctctgcgacccggcggacgaggaggtgtctcacatcaccagcgccgcc
cgccacaggcggaggcacgaggaggagcgcggcagcggtcaggagtccgggcggagccac
tccctctccccctacgccgcgccacactccctcaactcctcctcttcctcctccccttcg
caccctccccccccgctgccgccttcctcctcgaggagcgcgctcgggaaggatccgagc
gccttccaggacgagccgccgtccgacgaccagcggcgccactccatcgaggtctgcttc
ctgcagacggaccagctcttcgcgcgggcggagaaaggcggcggcggcatgccggcgttc
cccgtgcgggtgcagtcggtcgggggcggccaccggaagaagaagatgagccccccgtgc
atctccatccacccgccctgcgagcgggagcacccgcagttggccccgtcgccgaagccg
tccgactgcagcacgctgctgcggcgccggacgccgtcctacgacctgagcccgcacgcg
cagtcggaggactcgcaggcgcgctccccggcgctcacgcccgtccacgcgtcggtgtcg
tcgcagcagcagctgctgccgacgccctctccgtcgccggcgtccacgccgacgcgctcc
cggccgtcgtacgccgcgacgccgccgacgccgcacatccccatcagccccaacgtcttc
atccagccgcacgcgcccctcgtcccgaggcccttctcgcaggcgcactccctgtcgccc
gcggcgaggctcccctcgctctcggccgagtacatccccctcccccagttcaccttcgac
cagccgcagtcgcgctacatgagcggcctgtcacccggcctgtcagacggcgacgcggcc
tcctgctcctcggcgtcgtcgtcgcccttcgacaacagactcgggggcgccgccgggttc
agcgccaagaaccggaggaccgcccagtga
DBGET
integrated database retrieval system
