Clinocottus analis (woolly sculpin): 137786478
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Entry
137786478 CDS
T10471
Symbol
rhot1a
Name
(RefSeq) mitochondrial Rho GTPase 1-A isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
137786478 (rhot1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cana03029
]
137786478 (rhot1a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
cana04031
]
137786478 (rhot1a)
Mitochondrial biogenesis [BR:
cana03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
137786478 (rhot1a)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
137786478 (rhot1a)
GTP-binding proteins [BR:
cana04031
]
Small (monomeric) G-proteins
Rho Family
Miro
137786478 (rhot1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
EF-hand_1
Arf
EF-hand_7
RsgA_GTPase
MMR_HSR1
AAA_22
AAA
EF-hand_8
AAA_25
AAA_5
Motif
Other DBs
NCBI-GeneID:
137786478
NCBI-ProteinID:
XP_068434487
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MRKDVRILLVGEPKVGKTSLIMSLVSEEFPDEVPLRAEEITIPADVTPERVPTHIVDYSE
AEQSDEQLYQEISKANVICIVYSVNNKKSIEKVTSHWIPLINDRTDKDSRVPLILVGNKS
DLVEHSSMETILPIMNQYQDIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKE
LKPSCIKSLTRIFKVSDLDNDGILNDNELNFFQRTCFNTPLAAQALEDVKNVVRRNMADG
VQDNGLSLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELTQEYLFPMIKLPPDCTTE
LNHNAYLFLQSVFDKHDKDRDCALSPEEVKDLFKVFPYMPWGPDVNHTVCTNEQGWITYQ
GYLSQWTLTTYLDVQRSLEYLGYLGYSIICEQESQAAAITVTRNKRIDLQKKQTQRSVFR
CNVLGERGSGKSGFLQAFLGKNLQGQRRIREDHKSLYAISTTYVYGQEKYLLLHEVMPDF
DFLSEADLACDVVCLVYDINNPRSFEYCAKVYKQYFIDSKTPCVVIAAKSDMHEVRQHYS
LSPHEFCRKHKLHPPQPFTCSMADVPSKDIYTRLTTMAMYPHMAQADLKNSTFWLRASVG
ATVFAVLGFAMYRALLKQR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggacgtaaggatactacttgtgggggaacccaaggtggggaagacatcgctg
ataatgtctttggtcagcgaggagtttcctgatgaggttcctcttcgagctgaggagatc
accatcccagccgacgtcactccagagagggttcccacacacatagtggactactcggaa
gcagaacagtcagacgagcagctgtaccaagaaatatcaaaggcaaacgttatctgcata
gtttactcagtcaacaacaagaagtccattgaaaaggtgacaagtcactggatcccactc
atcaatgacagaacagacaaggatagcagggtgccgttgatccttgtggggaacaagtcg
gacctagtggaacacagcagcatggagaccatcctgccgatcatgaatcaataccaggat
atcgagacctgtgtagagtgctctgccaaaaacctgaagaacatctctgagctgttttac
tacgcccagaaggcggttctccacccgaccggacccctgtactgcccagaggagaaggag
ttgaagccttcttgcattaagtctttaactagaatctttaaagtgtctgacctggacaac
gatggcatccttaatgacaacgagctcaacttcttccagagaacctgtttcaacaccccg
ctggcggctcaggccttggaggatgtaaagaatgtggtcaggaggaacatggcggatgga
gtccaggacaacggactttcacttaaaggcttcctgttcctgcacactctcttcatacag
cgaggccgacacgagaccacctggacggtgctgcggaggtttggttacgacgatgatctg
gagctcacgcaggagtacctgttccccatgataaagttgcccccagactgcaccacagag
ctcaaccacaacgcttacctctttctccagagtgtctttgacaaacacgacaaagacaga
gattgtgcgctgtcgccagaggaggtgaaggacttgttcaaagtgtttccctacatgccc
tgggggccggacgtcaaccacacggtttgcactaacgaacagggatggatcacataccag
ggatacctctcccagtggacgttaacaacatatttagatgtacagcgtagtttggagtac
ttgggttatcttggctactccatcatctgtgaacaggagtctcaagctgcagccatcaca
gtgacgcgtaacaagcgcattgatctgcagaagaaacagacccagcgcagcgtcttccgc
tgcaacgtcttgggggagagaggcagcgggaagagcggcttcctgcaagctttccttggc
aagaacctgcagggacagaggcggattagagaagaccacaagtccctctacgccatcagc
accacatatgtttatggtcaggagaagtacctgctgctccatgaggtgatgccagatttt
gacttcctgtcagaggcggacctagcctgtgatgtggtctgcttggtgtatgacatcaac
aatccccgctcttttgagtactgcgccaaagtgtacaagcaatacttcatagatagcaag
acgccgtgcgtggtgatcgccgccaagtcggacatgcacgaagtacggcagcactacagt
ctctcgccgcacgagttctgccggaagcacaagctccacccgccccagccattcacatgc
agcatggccgacgtacccagcaaagacatctacacgagactcaccaccatggccatgtat
ccgcacatggctcaggccgacctgaagaactccaccttctggctcagagcgagcgtcggg
gccacggtgttcgccgtgctgggcttcgccatgtacagagcgcttctcaagcagcggtga
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