Clinocottus analis (woolly sculpin): 137786542
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Entry
137786542 CDS
T10471
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana00310
Lysine degradation
cana00514
Other types of O-glycan biosynthesis
cana01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
137786542 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
137786542 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cana01003
]
137786542 (colgalt1a)
Enzymes [BR:
cana01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
137786542 (colgalt1a)
Glycosyltransferases [BR:
cana01003
]
O-Glycan biosynthesis
O-linked Gal type
137786542 (colgalt1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
137786542
NCBI-ProteinID:
XP_068434582
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MSVLACLPAALLALLLSGCAPAGAYFAEERWSPESPLLAPRVLLALICRNSEHSLPYFLG
TIERLNYPKERMALWVATDHNKDNTTAILRDWLVKMQSLYHYVEWRPKEEPEHYQNEDGP
KQWGDLRYEHVMKLRQVALESAREMWADYFMLADCDNLLTNPNVLWKLMNENKTIIAPML
ESRAAYSNFWCGMTSQGYYKRTPAYIPIRKQVRKGCFAVPMVHSTFLIDLRKEASRQLAF
HPPHSEYSWAFDDIIVFAFSARMADVQMFVCNKETYGYFPVPLRSHNTLQDEADSFLHSL
LEVNVRNSPVMPSKYIRVPRKQPDKLGFDEVFMINLQRRTDRRERMMSALQEQGITCKVI
AAVDGKATNISEINAMGIHMLPGYNDPYHGRPLTKGELGCFLSHYNIWKEIVERRLDTSL
VIEDDLRFEIFFKRRLKNLMREVEDEGLDWDLIYIGRKRMQVDHPEKAVPNIHNLVEADY
SYWTLGYMISLQGAKKLLKAEPLKRILPVDEFLPIMFNKHPVSDYMKQFETRDLKAFSAE
PLLVYPTHYTGDKGYISDTETSTVWDNEKVHTDWDRARSGKTGEQAEISSEAQNSDVLQS
PLDSTARDEL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtactcgcctgcctccccgccgccctgctcgccttgctgctgtccggctgcgct
cctgctggggcatactttgcggaggagcgctggagccccgagtctccgctgctcgctcct
cgggtcctcctcgcgctcatctgcagaaactccgagcactctttgccgtatttcctcggc
actatcgagcgcctcaactatcccaaggagcgtatggcattgtgggtagcaactgatcac
aacaaggacaacaccacggccattctgcgtgactggcttgtcaagatgcagagcctttac
cattatgtggagtggaggccaaaagaagaaccagaacattatcagaatgaagatggtccg
aagcaatggggagacctccgttatgagcacgttatgaagcttcgacaagtagcactggag
tcggctcgtgagatgtgggcggactactttatgctggcggactgtgataacctcctcact
aaccccaacgtgctctggaagctcatgaacgagaacaagaccatcatcgcaccgatgctt
gaatcccgtgctgcctactcaaacttctggtgtgggatgacctcccagggttactataag
cgcacacctgcctacatacccatccggaagcaggtgcgcaagggctgttttgcagttccc
atggtccactctactttcttgatcgacctcaggaaagaggcgtccaggcagctggccttt
cacccgccacactcggaatacagctgggcttttgatgacatcattgtgtttgcattttcc
gctcggatggccgatgttcaaatgtttgtatgtaataaagagacctatggttacttccct
gtgccactgcgatcccacaatactttgcaagacgaagctgacagtttcttgcactccttg
ctggaggttaatgtgcgaaattccccagtgatgccttccaaatacatacgtgtacctaga
aaacaacctgacaaactgggctttgatgaggtgttcatgataaacctgcagaggcggacc
gaccgcagagagcgtatgatgagcgcgttacaggagcaggggattacctgtaaggtcatt
gcagctgttgatgggaaggcaacgaatatcagtgaaattaatgctatgggcattcacatg
ctccctggatataatgacccctatcatggtcgcccgctgacaaagggagagctgggatgc
ttcctttcccactataacatctggaaagagattgtggagcgacgactggacacctcactc
gtgattgaagatgacctgcgcttcgagatcttcttcaaacgacgtttgaagaacttgatg
agggaggtggaggatgaaggattggactgggatctcatctatattggtcggaagagaatg
caagtggatcaccccgagaaagccgtgcctaatatacacaacttagtggaagcagactat
tcatattggacgctaggctatatgatatcattacaaggtgccaagaagcttttgaaagca
gaaccactgaagaggattttgccagtggacgagtttcttccgatcatgttcaataaacac
cctgtgtctgattatatgaaacagtttgaaaccagggacctcaaggcattttcagccgag
cctcttctcgtgtatccaactcactacacgggcgacaaaggctacatcagcgacactgag
acctccacagtgtgggacaacgagaaggtccatacggactgggaccgagcgcgctcagga
aaaactggggagcaggctgagatcagctctgaggcccagaactcagatgtgctccaatca
cctttggatagtacagcgagggacgagctatga
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