Clinocottus analis (woolly sculpin): 137786632
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Entry
137786632 CDS
T10471
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cana03016
]
137786632 (tsen54)
Transfer RNA biogenesis [BR:
cana03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
137786632 (tsen54)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
DUF5427
Motif
Other DBs
NCBI-GeneID:
137786632
NCBI-ProteinID:
XP_068434735
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MRSSGRLELAGLNMADQNKDTESKFNNEILTPSELFAARSRSRKIPVRGQKDFFPDDSDE
QRQRLEKSLNEHWSLISEERVEKLPSELFAARSRSRKIPVRGQKDFFPDDSDEQRQRLEK
SLNEHWSLISEERVEKLGNLVKATWIPSQRMVELQSPAGKFWQTMGFSASGKQCLLPEEA
LYLMECGSLQVFHRQLPLSIQDGYECFLSSGPPSLLQYQVFSHLKRLGYVVLRFQPSSQS
SYARQLNLPQSRDRAEKRVKRKRSDDATPSHTEAPEESTAVRMEEDKKHPETPGSQNAGP
AGGGGTWWTTDVLGDQSDHRPPPSGFSPSRRDLGSVLFPDLGSGHRLPGGRLAPPDPSLL
PGGLAVGVCDVDAWRRRINLRDVKTTPREEERRRRRWDVNKDREVRWCRNWAEYRALLER
RRGRSHGRPAHLWSREVTPLHDPTEPISTAELQDKLSVIESTHLLEGASSLEDSGEWPIC
FNVYQPDLVADFKKSSPGKAYARVCVCRFDGPVPDLRALKQLARRSPDVPVVFGVVDHGD
VSFYTFKGFQLPADVFP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtagcggccggctcgagctcgcaggtttaaacatggcggaccaaaacaaggac
accgagtcgaagttcaacaacgaaatattaactccgtctgagctgttcgccgctcggtcg
cgtagccgcaagatcccggtccgagggcagaaggacttcttccccgacgactcggacgag
caaagacagcgactggagaagagtctgaacgagcactggagcctcatatcggaggagagg
gtggagaagcttccgtctgagctgttcgccgctcggtcgcgtagccgcaagatcccggtc
cgagggcagaaggacttcttccccgacgactcggacgagcaaagacagcgactggagaag
agtctgaacgagcactggagcctcatatcggaggagagggtggagaagctaggaaacctg
gtgaaggccacatggattccaagtcagcggatggtcgagcttcagtctccagctggcaag
ttctggcagacgatgggcttttctgcctccggcaagcagtgcctcctccccgaagaggct
ctctacttgatggagtgtggcagcctgcaggtgttccaccgtcagctgccgctgagcatc
caggacggctacgagtgcttcctgtcctccggcccgccgagcctcctgcagtaccaggtg
ttctctcacctgaagaggctcggctacgtggtgctccgcttccagcccagctctcagtcg
tcctatgccaggcagctgaatcttcctcagtcacgtgaccgagcggagaaacgcgtgaag
aggaagcgcagcgacgacgcgacacccagtcacacggaggcgccggaagagtccacggct
gtcagaatggaggaggacaaaaagcatccggagacgccgggctcccagaacgccggtcca
gcgggcggaggcgggacctggtggacgacggatgtcctcggggaccaatcggaccaccgg
ccgcccccctccggtttctctccctcccgtcgggacctcggctccgtcctcttccccgac
ctgggctccgggcatcggctccccggcggccgcctggccccgccggacccctcgctgctc
cccggcggtttggccgtgggcgtctgcgacgtcgacgcctggaggcggaggatcaatctg
agggacgtgaagacgaccccgcgggaagaggaacgccggaggcgccggtgggacgtcaac
aaggaccgagaggttcggtggtgcagaaactgggcggagtatcgagcgcttctggagcgc
cgtcgggggaggagccacggccgaccggcgcacctgtggagccgtgaggtcacgcccctt
cacgatcccacagagcccatttccaccgcggagctgcaggataaactcagtgtgatcgaa
tctacacatctactggagggagcgtccagcctggaggactcgggcgagtggccgatctgt
ttcaatgtttaccaacccgacttggtggccgacttcaagaagagcagtccggggaaagcg
tacgcccgtgtgtgcgtgtgcaggttcgacggcccggtgcccgacctgcgcgccctgaag
cagctggcgcgccgcagcccggacgtcccggtggtgttcggcgtggtcgaccacggggac
gtctccttctacaccttcaagggcttccagctgcccgccgacgtcttcccctga
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