Clinocottus analis (woolly sculpin): 137786647 Help Entry 137786647         CDS       T10471                                  Symbol col1a1a Name (RefSeq) collagen, type I, alpha 1a   KO K06236   collagen type I alpha Organism cana  Clinocottus analis (woolly sculpin) Pathway cana04510   Focal adhesion cana04512   ECM-receptor interaction cana04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cana00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     137786647 (col1a1a)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     137786647 (col1a1a)   09142 Cell motility    04820 Cytoskeleton in muscle cells     137786647 (col1a1a)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cana00536]     137786647 (col1a1a) Glycosaminoglycan binding proteins [BR:cana00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    137786647 (col1a1a) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  137786647 NCBI-ProteinID:  XP_068434761 LinkDB All DBs Position Unknown AA seq 1447 aa AA seqDB search MFSFVDLRLALLLGAAVLLVRAQGEDDRTGGSCTLDGQVFADRDVWKPEPCQICVCDSGT VMCDEVICEDTTDCPNPVIPHDECCPICPDDGFQEPQVEGPKGERGPKGERGNPGPPGND GVPGQPGYPGPAGPPGPPGLGGNFSPQMSGGYDDKSPSMPVPGPMGPMGPRGPPGAPGSS GPQGFTGPPGEPGEAGQAGAMGPRGPAGPSGKNGEDGESGKPGRGGERGPSGPQGARGFP GTPGLPGIKGHRGFSGLDGAKGDNGPAGPKGETGASGENGTPGAMGPRGLPGERGRNGAS GAAGARGNDGAAGSAGPNGPTGPAGPPGFPGGPGSKGDAGPQGARGSEGPAGSRGEPGNP GPAGPAGASGNPGTDGASGVKGTPGAAGVAGAPGFPGPRGPPGPQGAGGAPGAKGNTGDV GGPGAKGEAGVKGEAGVAGVAGAPGPSGEEGKRGARGEPGVAGARGAPGERGAPGGRGFP GSDGAAGAKGANGERGAPGGIGPKGSTGESGRTGEPGLPGAKGMTGSPGSPGPDGKLGPA GATGQDGRPGPPGAVGARGQPGVMGFPGPKGAAGEGGKPGERGVMGPTGALGAPGKDGDV GAQGPSGPAGPAGERGEQGPGGPPGFQGLPGPQGAVGESGKPGEQGVPGEAGATGPAGNR GDRGFPGERGAPGVVGPAGARGSVGSAGNEGAKGDAGASGAPGAQGPPGLQGMPGERGAA GLPGLRGDRGDQGGKGVDGAPGKDGPRGLTGPIGLPGAAGATGDKGEPGAAGPVGPVGGR GGPGERGESGSPGPAGFAGPPGADGQPGAKGESGDNGAKGDAGPPGAAGPTGAPGPQGPN GNTGPKGARGGAGPSGATGFPGAAGRVGPPGPSGNAGPPGPSGPAGKEGPKGNRGETGSA GRSGEMGAAGPPGPAGEKGGAGGDGPTGAPGIPGPSGIAGQRGIVGLPGQRGERGFPGMP GPSGEVGKPGPSGPGGERGPPGPMGPSGLAGPSGEAGREGSPGNEGSAGRDGPAGPKGSR GESGPAGAAGAPGPSGAPGPVGPAGKNGDRGETGPSGPAGAAGPAGPRGPGGAPGLRGDK GESGEAGERGMKGHRGFTGMQGAPGPAGSNGEQGPAGSAGPAGPRGPSGSAGSAGKDGMT GLPGPTGPPGARGRSGEMGPAGPTGAPGPPGAPGAPGGGFDLGFISQPQEKAPDPFRMFR ADDANVLRDRDLEVDGTLKSLSQLIENIRSPDGTRKNPARTCRDLKMCHPDWKSGEYFID PDQGCTHDAIKVYCNMETGETCVTPSQPEVAKKNWYMSKNIKEKKHVWFGEAMTDGFQFE YGSEGSSPQDVNIQLTFLRLMSTEATQNVTYHCKNSVAYMDATVGNLKKALLLQGSNEIE IRAEGNSRFTYSVLEDGCTSHTGTWGKTVIDYKTSKTSRLPIIDIAPMDVGAPDQEFGLE VGPVCFL NT seq 4344 nt NT seq  +upstreamnt  +downstreamnt atgtttagctttgtggatttgaggctcgcgctgctgctcggcgcagcagtgctcttggtc agggcgcagggcgaggacgaccgcacgggcggaagctgcaccttggacggacaagtgttt gcagatagggatgtgtggaagcctgagccatgccagatctgtgtgtgcgacagcggcacg gtgatgtgcgatgaggtcatctgcgaggacacaactgactgccccaaccccgtcatcccc catgacgagtgctgccccatctgccccgacgacggcttccaggagcctcaggttgaggga cccaagggagaacgtggacccaagggagagagaggtaatcccggcccccctggtaatgac ggtgtccccggccagcccggttatcccggacctgccggcccccctggaccccccggcctc ggtggaaacttctcccctcagatgtctggtggctacgatgataaatctccttccatgcct gttcctggaccaatgggcccaatgggaccccgcggacctcccggagctcccggttcaagt ggacctcagggattcaccggcccccctggtgagcctggagaggctggacaagctggtgcc atgggaccccgtggccccgccggcccctctggaaagaacggagaggatggtgagtctggc aaacctggtcgtggcggtgagcgtggaccttccggcccacagggagctcgtggtttccca ggaacccctggcctgcccggcatcaagggacacagaggattcagtggtctggatggtgcc aagggagacaatggccccgctggtcccaagggagagactggagcttccggtgagaatggt actcctggtgctatgggacctcgtggtctgcccggcgagagaggtcgcaatggagcctct ggagctgctggagctcgtggtaacgatggtgctgctggttctgccggacctaacggtccc actggccccgctggacctcccggattccccggtggccctggatccaagggtgacgcagga cctcagggtgcacgtggatccgaaggccccgctggatcccgtggcgagcctggcaacccc ggacctgctggccccgctggagcctctggaaaccccggaactgatggagcttctggagtt aagggtacccccggtgctgccggagttgccggagctcccggtttccccggaccacgtgga cctccaggacctcagggtgctggcggtgcacccggagccaagggtaacactggcgacgtc ggtggcccaggagccaagggagaggctggtgtcaagggagaggctggtgttgcaggagtt gctggagccccaggaccatccggtgaggaaggcaagagaggagccagaggagagcctggt gttgcaggagcccgtggagctcctggagagcgaggtgcccctggtggtcgtggtttccct ggatctgatggcgccgctggagccaaaggtgccaatggcgagcgtggtgcccccggtggt attggacctaaaggttcaaccggtgaatctggccgcactggtgagcctggtttgcccgga gctaagggtatgactggtagccctggcagccctggacccgatggcaagctgggacccgct ggagcaacaggacaagatggccgccccggaccccctggcgctgttggcgctagaggccag cctggagtcatgggattccctggacctaaaggagctgctggtgagggtggaaagcctggc gagagaggagtaatgggacccactggcgcacttggtgctccaggaaaggacggtgacgtt ggtgctcaaggcccctctggacctgctggtcctgctggtgagagaggagaacaaggacct ggcggacctcccggattccagggtctccccggacctcagggtgccgttggtgagagtggc aagcccggagagcagggtgtgcccggtgaggctggagcaacaggacctgctggcaataga ggtgacagaggattccccggtgagcgtggcgcacctggtgttgttggacctgccggtgcc cgtggatccgttggatctgctggaaacgagggtgctaagggagatgctggagcctccggt gctcctggagcccagggtcctcctggactgcagggaatgcctggtgagcgtggagctgct ggccttccaggactgaggggagacagaggtgaccaaggaggcaagggtgttgatggagct cctggtaaggatggtccccgtggattgactggaccaattggacttcccggagctgctggt gccaccggagataagggagagcctggcgcagctggacccgtcggaccagttggaggtcgt ggaggccccggagagcgtggagagtctggatcacctggacctgctggattcgctggacct cctggagctgatggacagcctggtgctaagggagagtctggagataatggtgctaaggga gatgctggtcccccaggtgctgctggaccaactggtgcccccggacctcagggtcccaat ggaaacactggccctaagggagcccgcggaggtgctggaccttctggtgctactggcttc cctggtgctgctggtagagttggacctcccggcccctctggcaatgctggacctcccgga ccctctggaccagctggcaaagagggacccaaaggaaaccgtggtgagactggatctgct ggtcgctctggtgagatgggtgctgctggacccccaggacctgctggagagaagggtggt gctggtggagacggacctaccggagctcctggtatccctggaccttcaggtattgctgga cagcgtggtattgttggtctgcctggacaaagaggagagagaggtttccctggcatgccc ggaccatccggagaggttggaaagcctggaccttctggccccggtggtgagcgcggacct cccggacccatgggaccctctggactggctggaccctctggtgaggctggacgtgaggga agccccggaaacgagggatcagctggtcgcgatggacctgctggacctaagggaagccgt ggtgagagtggcccagctggagcagctggtgcccctggaccctctggtgcccccggaccc gttggacccgctggaaagaatggtgaccgtggagagactggacctagtggccccgctggc gctgctggccctgctggacctcgtggccctgggggagctcctggacttcgcggagacaag ggagagagtggagaggctggagagagaggcatgaagggacacagaggattcactggcatg cagggagctcctggacccgctggatctaatggagagcaaggacccgctggttctgctgga cctgctggacccaggggaccttctggatctgctggatctgctggtaaggacggtatgact ggcctgcccggacccactggacctcccggagctcgtggacgttctggagagatgggacct gctggtcctacaggagctcctggacctcccggcgcacctggtgcccccggtggcggattt gacctcggcttcatttcccagcctcaggagaaggcccccgatcccttccgcatgttccgc gctgacgacgctaacgttctccgtgaccgcgacctggaggtcgatggcaccctgaagagc ctgagccagctgatcgagaacatccgcagccctgacggaacccgcaagaaccccgccaga acctgccgcgacctcaagatgtgccaccctgactggaagagcggcgagtacttcatcgac cctgaccaaggctgcactcatgatgccatcaaggtctactgcaacatggagaccggagag acctgcgtgaccccaagtcagcccgaggtcgccaagaagaactggtacatgagcaagaac atcaaggagaagaagcacgtgtggttcggagaggctatgaccgatggcttccagtttgag tatggcagcgagggctcttcaccacaggatgttaacatccagctgaccttcctgcgtctc atgtccactgaggcaacccagaacgtcacctaccactgcaagaacagcgtcgcctacatg gacgctaccgtcggcaacctcaagaaggccctgctcctccagggctccaacgagatcgag atcagagccgagggcaacagccgcttcacctacagtgtcctggaagatggatgcacgtca cacaccggtacatggggcaagacagtcatcgactacaagacatcgaaaacatctcgcctg cccatcattgacatcgctcctatggacgttggtgctccagaccaagagtttggccttgaa gttggacccgtctgtttcttgtaa

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