Clinocottus analis (woolly sculpin): 137786921
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Entry
137786921 CDS
T10471
Name
(RefSeq) transportin-2-like isoform X1
KO
K18727
transportin-2
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137786921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137786921
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
137786921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
IBN_N
TOR1L1_N
Vac14_Fab1_bd
Arm
HEAT_EF3_N
TPR_IPO5
Cnd1
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
MMS19_C
Ltn1_1st
Dopey_N
UNC45-central
TPR_CAND1
INTS7_N
HEAT_DAAF5
TPR_TTI1_C
RTP1_C1
TPR_IPO11
Motif
Other DBs
NCBI-GeneID:
137786921
NCBI-ProteinID:
XP_068435164
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MEWQPDEQGLQQVLQLLKDSQSPNTVTQRAVQQKLEQLNQFPDFNNYLIFVLTRLKTEDE
PTRSLSGLILKNNVKAHYQNFPPTVAEFIKQECLGNIGDPSPLIRATIGILITTISSKGE
LQTWPELLPQLCNLLNSEDYNICEGSFGALQKICEDSSELLDSDALNRPLNIMIPKFLQF
FKHCSPKIRSHAIACVNQFIIGRAQALMDHIDTFIESLFALAADEDSEVRKNVCRALVML
LEVRIDRLIPHMHSIIQYMLQRTQDPDENVALEACEFWLTLAEQPVCKEMLSGHLVQLTP
ILVNGMKYSEIDIILLKGDVEEDEAVPDSDQDIKPRFHKSRTVTLQHEGAEDEAEDNDDD
DDDDDDDTLSDWNLRKCSAAALDVLANVFRDDLLPHLLPLLKGLLFHPDWVIKESGILVL
GAIAEGCMQGMVPYLPELIPHLIQSLCDKKALVRSIACWTLSRYAHWVVSQPPDSYLKPL
MTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSFILDTLVFAFGKYQHKNLLIL
YDAIGTLADSVGHHLNQPEYIEKLMPPLIAKWNELKDEDKDLFPLLECLSSVATALQSGF
LPYCEPVYQRCVTLVQKTLAQAMMYNQHPDQYEAPDKDFMIVALDLLSGLAEGLGSHVEQ
LVARSNIMTLLFQCMQDTMPEVRQSSFALLGDLTKACFLHVKPCIAEFMPILGLNLNPEF
ISVCNNATWAIGEIAMQMGAEMQPYVGVVLPNLVEIINRPNTPKTLLENTGTHSWKCAVT
VGTKMGNCPRINGECFLFVSLCAAITIGRLGYVCPQEVAPQLQQFIRPWCTSLRNIRDNE
EKDSAFRGICVMIGVNPAGVVQDFIFFCDAVASWVNPKEDLRDMFYKILHGFKDQVGEEN
WQQFSEQFPPLLKERLSACYGV
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcagccggatgagcaggggcttcagcaggtcctccaactgctcaaagactcg
cagtcgcccaacacagtcacgcagagagcagtccaacaaaaacttgaacaactcaaccaa
ttcccagacttcaacaactatctcatctttgttctcacgcgactcaaaactgaagatgag
ccgacccgctctctgagcggtctgatactgaagaacaatgttaaggcccactaccagaac
ttccccccgaccgtggcggagttcatcaagcaggaatgtctcggcaacatcggggacccc
tcgccgcttattcgtgccaccattggcatcctgatcactaccatttcctccaagggagag
ctccaaacatggcctgagctgcttccccagctctgcaacttgctcaactctgaggactac
aacatctgcgagggctcatttggagcactgcagaagatctgtgaggactcgtcggagctg
ctggacagcgacgctctgaacagacccctcaacattatgataccaaaattcctccagttc
ttcaagcactgcagccccaagattaggtcccatgctatcgcctgtgtgaaccagttcatc
attggcagagcccaggccctaatggaccacattgacaccttcatagagagcttgtttgcg
ctggcagcagacgaggactccgaggttcgaaagaacgtgtgccgagccctggtcatgttg
ctggaggtccgcatagaccgcctcatcccacacatgcacagcatcatccagtacatgctg
cagagaacccaggaccccgatgagaacgtggccctggaggcctgcgagttttggctgact
ttagcggagcaacccgtctgtaaggagatgctgtctggacacctggtgcaactaacgcct
atcttggtaaatgggatgaagtattcagaaatagacatcatactattaaagggagacgtc
gaggaggacgaggccgtacccgacagcgatcaggacatcaagccccgtttccacaagtcg
cgcaccgtcaccctgcagcacgagggggcggaggacgaggcggaggacaacgacgacgac
gatgacgacgacgacgacgacacgctgtcggattggaacctgcggaagtgttcggccgcc
gcactggacgtgctggccaacgtgtttcgggacgatctgctgccccacctcctgccgctc
ctgaaaggcctgctcttccaccccgactgggtcatcaaggagtctggcatcctggtcctg
ggagccatagcggagggctgcatgcagggcatggtaccttacttgccagagctgatcccc
cacctcatccagagtctttgtgacaaaaaggccctcgtgcgctccattgcctgctggacc
ctgagtcgctatgcacattgggtggtctcccagccccctgactcctacctcaaaccgctc
atgacggagcttctgaagcgcatcctggacggcaacaagagggtgcaagaggctgcttgc
agtgcgtttgccaccctggaggaggaggcgtgcacggagctggtgccctacctgagcttc
atcctggacacgctggtgtttgcctttgggaagtaccagcacaagaatctgctcattctc
tacgatgccataggaactctagcagactcggtcggccaccacctcaatcagcccgagtac
attgagaagttgatgccccccctcattgccaagtggaacgagctgaaggacgaagacaag
gatctcttcccactgctagagtgtctgtcgtcggtggcgaccgccctgcagagtggcttc
ctgccttactgcgagcccgtctaccagcgctgcgtcacgctcgtccagaagactctggct
caggccatgatgtacaaccagcatccagaccagtacgaggctcccgacaaggacttcatg
atcgtcgccttggatctgctgagcggcctggccgagggcttgggttctcacgtggaacag
ctcgtggcccgctccaacatcatgaccctgcttttccaatgcatgcaggacactatgcct
gaggtgaggcaaagctccttcgcactgctgggggatctaaccaaggcgtgcttcctccat
gtgaagccctgcattgctgagttcatgcccatcctggggctcaacctgaacccagagttc
atctctgtgtgcaacaacgccacctgggccattggagagatcgccatgcaaatgggtgca
gagatgcagccgtatgtgggcgtggttctgccaaacctggtagagatcattaatcgaccc
aacacacccaagactttgctggagaacacaggtacacacagttggaaatgcgcagtgaca
gttggaacaaaaatgggaaactgtccgcgtattaacggtgaatgctttttgtttgtctcc
ctctgtgcagccattacgattggcagactgggctacgtctgcccccaagaagtcgcccca
caactccagcagttcattagaccatggtgcacgtcgctgaggaatatccgagataacgag
gagaaggactcggccttcaggggaatctgtgtgatgatcggcgtcaaccccgcaggagtg
gtgcaggacttcattttcttctgtgacgccgtggcctcctgggtcaaccccaaggaggac
ctgagggacatgttttataagatcttgcatggcttcaaggaccaggtgggagaagagaac
tggcagcagttctccgagcagttcccccctctgttaaaggagcgcctgtcggcgtgctac
ggcgtctaa
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