Clinocottus analis (woolly sculpin): 137786947
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Entry
137786947 CDS
T10471
Symbol
fn1b
Name
(RefSeq) fibronectin 1b isoform X1
KO
K05717
fibronectin 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04510
Focal adhesion
cana04512
ECM-receptor interaction
cana04810
Regulation of actin cytoskeleton
cana04820
Cytoskeleton in muscle cells
cana05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137786947 (fn1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137786947 (fn1b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
137786947 (fn1b)
04810 Regulation of actin cytoskeleton
137786947 (fn1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
137786947 (fn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137786947 (fn1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cana04147
]
137786947 (fn1b)
00536 Glycosaminoglycan binding proteins [BR:
cana00536
]
137786947 (fn1b)
04990 Domain-containing proteins not elsewhere classified [BR:
cana04990
]
137786947 (fn1b)
Membrane trafficking [BR:
cana04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
137786947 (fn1b)
Exosome [BR:
cana04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
137786947 (fn1b)
Glycosaminoglycan binding proteins [BR:
cana00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137786947 (fn1b)
Domain-containing proteins not elsewhere classified [BR:
cana04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
137786947 (fn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
fn2
Fn3_Dep-1_2nd
NDNF
Interfer-bind
FN3_Tor_3rd
Pax2_C
MG4
Motif
Other DBs
NCBI-GeneID:
137786947
NCBI-ProteinID:
XP_068435198
LinkDB
All DBs
Position
Unknown
AA seq
2463 aa
AA seq
DB search
MTGGPLTGLLVALCVSSAVHGLPQKSKRQTGQFQVLPPLNDAAAVSAGCEENGRSHRLHE
QWEKPYLGSTLVCTCNGAAGIKCKTKPEVEETCYDKNNDRTYRVGETYERPKDGMMWDCT
CIGSGRGKISCTIANRCHEGRMSYKIGDTWQRPHETADYMLECVCLGNGKGEWTCKPVAE
RCYDNSAASSYVVGETWEKPYQGWMMLDCTCLGEGNGRITCTSRNRCNDQDTRRSHRIGD
SWSKTDTSGHIVQCQCMGNGRGEWKCERHKAGRTTGAVALTPNQSQTQVLAEPLIEGTCR
TDSGATYYDGQRWFRTQGSKQMLCTCLGNGVSCQEWETRKLAYGGNSNGLPCAFPFVFMG
KTYYSCTSDGRTDGQLWCATSSDYERDQQYSFCTEKNAIVATRGGNSNGGLCHFPFLYSG
RNYTDCTADGRRDNMRWCGTTHDYDTEQRFGFCPMAAHEELCTTNDGVMHRVGDKWDKRH
DVMGHAMECTCLGNGRGEWSCVAHSQMRDQCVVDSLSYEVNQEFTKRHDEGYMMNCTCYG
QGRGRWKCDAIDQCQEPQTRAFYQIGDTWEKVIHNIHYRCYCYGKGIGEMRCEPQQTYQG
GHRPVQVIITEAGKQPDSHPIQWNPPSSVQITQYILKWRIKNTRAPWKEVTVPGHLNSYT
ISGLRPGITYEGQLISILHYGRREVTRFDFTTTHGSLETSEGETTLPAAVMDTSESVTEI
TSNSFVVSWTSASSTISGFRVEYELSEDGAKPKVLDVPRTASSVTIADLLPGRRYNVNVY
ELPNQGQPNLILTTSQTTAPDAPAQHAVEDVKESSIRISWSRPQAPITGYRVVYTPSMEG
SSTELNLPDSETSVTLADLLPGLLYNISIYAVEENQESEPVFVQVNTAGSPVPEEVPAPT
DLQFYEVTDMKITITWTGPPSEVTAYRVHFTPIGPDGTETRLLQLPFSPNAYADITHLQP
GTLYRFYIYAINGGVESKPLVGEKSTKPDAPSEVRFTDIGHDSAMVTWEAPRTIVSGYRL
FLSIEGSSPIEKRIPSGVTQYPLRNLRPETQYTAVLHSELDNDLSEGVTTYFTTFPEMGN
APAFSTEVTDSSIIVTWMPVRRFSYKLSVLPSQEGESPRQETSASGRIYIPGLIPGTQYT
YSVQPIFNGRNRGNPITRNVVTSLSPPTDLRVESNPATGDLTVHWVASKTPGITGYRVTS
TPTTGQRGNTLEEFVRADQTSCMLESLNLGAEYNISVFTTKGHLESVPVSTIVTPDIPAP
SHIDFVNITDTTIGLRWIPLNYATITGYRITVVTSGESLPIFQDMVEASAGYYTILGLEP
GVDYDISIFTVTEEGESKPTVYTKQTQAAIPAPTNLQFRGVGPDHIRVTWAVPHVATPSD
ISRFVIRYHPVATDDDIKEVNVGGATNTFLLENLLPNTEYRISVLCVYGERISEPATGTQ
RTTLDSPTGLDFSDIRTNSFTVHWLAPTAAITGYRINFLKTSGGRSKDERLPPTRNHFTL
TGLTPETEYQVNVYAVSNNQESHPLTGTQATISDAPTDLEVTSSTPSSITIRWDAPSVTV
KNYRITYRGTSGEAPQEFSIPGSQTTATITGLKPGIEYTITVYAVTGRGDSPASNTPVYI
MHKTDTESPTNMKLTDVSHNALTVRWSPAQGPIRGYRITSVPKNGLGPSYSEVVAPDQTQ
MTFTGLMPTVEYVVSVYALGNDGQPSSPVVENTITAMDRPKDLTFTDINSNSMRITWDSP
DGTVTSYRVLYSSSEESERELYPAPRGDQDTVVLRNLRPGTEYTVKVIALHGRTPSTPLV
GTQATVIPAPTRLMVSEVGPSTFTVSWQAPNARLSGYRVVVNPKNINGPTKEMNVAPDTT
RVVVPGLMVATTYQIHVYALKNSVTSRPLDGETTTLEDVSPPRRVRISDMKDSSFTLTWK
AKVETITGYLIDATPLSGLHPTISSTISGAANTYTLTGLQPGTTYSVNLYTLKGNTKSDP
FTLIITTAKAVVQAPTNLQFTSLTPTSISFTWQPPATPITGYYVTYEESGGAPRELNPRP
HAGQNYATISGLKPATEYIIKIIAIQNTQRSTPLFGRIRTQPDSLLVLPLPHRPGGIDDR
LDVPDTNLDNRVQVVGNNGQDGHEDQSQNVEYTEYNNNGDNNRNNGNGGNPQSPYGQVRE
PLVFVPLPDAEGRRLPILKLNMPIGSTFGNETGVPQEAQTRTSISWKPYKQSTAYMVSCH
PLSHLNEKMFQVRLPGTATTATLIGLSPGENYNVIVEALMGALKHKILEQIVTAGNTIPE
GVPSTKDSCYDAFTSTYHDVGGEWERMSETGFKLWCRCLGLGTGHFRCDSSKWCHDSGNN
YRVGEKWDRRAENGHLMSCTCLGNGKGEFKCEPHDSVCYDDGKTYQVGNQWQKEYLGAIC
TCTCFGGQQGWRCENCLRPGGDVDASLLQPVRYGNKLQNIHCPIECLRPDLLADAHAPPN
PLE
NT seq
7392 nt
NT seq
+upstream
nt +downstream
nt
atgactggtggcccactgactgggttactggttgcgctgtgcgtaagcagcgcagtccac
ggcttaccacagaagagcaaaagacagactggccagtttcaggtgcttcctccgctcaat
gacgcagcggccgtctcagccggctgtgaggaaaacggtcgctcacacagactgcacgag
cagtgggagaaaccctaccttggtagcacactggtatgcacctgcaatggagcagcaggc
atcaaatgtaaaactaaacctgaagtggaggagacctgttatgataagaacaatgaccgg
acctaccgggtcggtgaaacctatgagagaccaaaggatgggatgatgtgggactgcacc
tgtattggatccggtcgtggcaagatcagctgtactattgcaaatcgttgccatgaaggt
aggatgtcctataaaatcggagacacttggcagaggcctcatgaaacggctgactacatg
ctggagtgtgtgtgtctgggaaatggcaaaggagagtggacctgcaaaccagtggctgag
cgttgctatgacaacagcgctgcgtcatcgtacgtcgtaggggagacctgggagaaaccg
taccaaggctggatgatgctggactgcacctgtctgggagaaggcaatggacgcatcact
tgcacctcaaggaaccgttgcaacgaccaggacaccagaaggtcccaccgtattggtgac
tcatggtcaaagacggacacaagtggccacatcgtgcagtgtcagtgcatgggaaatggc
cgtggagagtggaagtgtgagagacacaaagcaggccgaaccacaggtgcggtcgcgttg
acccccaaccaatcccagacccaggtgctggcagagcccctcattgagggtacgtgccgc
acggactctggagcaacctactacgacgggcagcgctggttcagaacccagggcagcaag
cagatgctctgcacctgtctgggcaacggagtcagctgtcaggagtgggagaccaggaag
ctggcgtatggtggcaactctaacggcctgccgtgtgcattcccgttcgtcttcatggga
aagacctactactcctgcacctcagacggacgcacggacgggcagctctggtgtgctaca
tcttcagactatgagagagaccagcagtactctttctgtactgagaagaatgccattgtg
gcaacacgaggtggcaactccaacggcggcctgtgccacttccccttcctctacagtggc
cgcaactacactgactgcaccgctgacgggcgccgtgacaatatgaggtggtgtggcacc
acccatgactacgacacagagcagcgctttggattctgccccatggctgcccatgaggag
ctatgtaccaccaacgatggagtgatgcaccgcgtaggtgataagtgggacaaacgccat
gatgtcatgggtcacgccatggagtgcacatgcctgggcaatggccgaggggagtggagc
tgtgtggctcactcacagatgcgagatcagtgtgttgttgacagcttgtcctatgaagta
aaccaggaattcaccaagcgccacgatgagggctacatgatgaactgcacctgctatgga
caggggcgtggacgctggaagtgtgatgcgatcgatcagtgtcaggagccacaaaccagg
gctttctatcagattggagatacgtgggagaaagtcatccataatatccactaccgctgt
tattgctatggcaaagggattggagagatgagatgtgaacctcagcagacctaccaaggt
ggccacagacctgtgcaggtgatcatcacggaggccggaaaacaaccagactcccaccct
attcagtggaaccccccctcatcagttcaaatcacccagtacatcctcaaatggagaatt
aaaaatacccgcgctccctggaaggaggtcactgtccccggccaccttaactcctacacc
atcagcgggctgcgtcccggcatcacctacgagggtcagctgatcagcatcctgcactac
ggacgccgcgaggtcacccgcttcgatttcaccacgacccacggttcattggaaacatcg
gagggagagacgaccctacccgctgctgtgatggacacttctgagtctgtaacagaaatc
acttcaaacagcttcgttgtgtcgtggacgtcagcctcttcgaccatctctggcttcagg
gtggagtatgagctcagtgaggatggggccaagccgaaagtcctggatgttcctcgcaca
gcctcctctgtcaccatcgctgacctcctgccaggacgcagatacaacgtcaacgtttat
gagctcccaaatcagggacaaccaaacctcattctgactactagccagactacagctcct
gacgctcctgcacagcatgcagtcgaagacgtgaaagagtcctcgatcagaatcagctgg
tccaggcctcaggctcctattactggttaccgggtggtgtacacaccgtcgatggaaggc
agcagcactgagcttaacctgccagactcagaaacctcagtgaccctggccgaccttctc
cccggtctactttacaacatcagcatctacgctgtcgaggagaaccaggagagtgagcct
gtttttgtacaggtcaatactgccggatcccctgtaccagaggaggtcccggcacctaca
gacctgcagttctacgaggtgactgatatgaagatcacaatcacctggaccggtccaccc
agcgaggttaccgcttacagagtgcacttcactcccatcggtcctgacggcactgagacg
aggctcctgcagctgcctttctcccccaacgcatatgctgatatcacccacttgcagccg
ggcacactgtaccgcttttatatctacgccatcaatggaggagtggagagcaagccgctt
gtgggagaaaagtcgaccaaacctgatgctcccagcgaggtgcgcttcactgacatcggt
cacgacagcgccatggtcacatgggaggctccccgcaccatcgtcagtggctaccgtctc
ttcctgagcattgagggctccagtcccattgagaagaggatccctagcggggtcacacag
taccctttgaggaatttacgtccagagacgcagtacaccgccgtcctgcactcggagctt
gacaatgacctcagcgaaggcgtcactacatattttaccacctttcccgagatgggaaat
gctcctgctttcagcaccgaggtcactgacagctctattatcgtcacctggatgcctgtt
cgcaggttcagctacaagctgtctgtgctcccgagccaggaaggcgagtctcccagacaa
gagacttctgcctctgggcgtatttatattcctggtctgattcctgggactcagtatacc
tacagcgttcagccgatctttaacggacgcaaccgtggaaaccccatcacccgcaatgtt
gtcacttccctgtctcctcccactgacctcagagtagagtccaacccggcaacaggagat
ctcactgtccactgggtagcttccaaaacaccaggcatcacaggctacagagtgacgagc
acgccaaccaccggccagcgaggaaacaccctggaagagtttgtccgagcagatcaaacg
tcatgtatgctcgagagcctgaatctgggggccgagtacaacatcagtgtcttcactacc
aagggccatttggaaagtgtgcccgtgtccacaattgtcacaccagacatccctgcgcca
agtcacattgactttgtcaacattactgacaccaccatcggcctgcgctggatccctctg
aactatgctaccattactggttaccggataacagtagtaacgtcaggagagagcttacca
atttttcaagatatggtggaagcatctgctggttattacacaattcttggtttggagccg
ggcgtggactatgacatcagtatcttcactgttacagaggaaggggaaagcaagccgacc
gtatacacaaagcaaacacaagctgctattccagctcccaccaacctgcagtttagaggg
gtgggtcctgaccacattagagtgacatgggcagtcccccatgttgccacgccaagcgac
atctctcggtttgtcatccgttaccatcccgtagccacagacgacgacatcaaagaggtt
aatgttggcggagccaccaacaccttcttactggagaacttgctgcccaacactgagtac
cgtataagtgttctttgtgtgtacggtgaacgaataagtgaaccagccacagggacccag
aggacaactctggactctcccactggcttggacttctccgacattcgcaccaactccttc
accgttcactggctggctccgaccgctgctatcaccggctaccgcattaacttcctaaag
acgagcggcgggcggtcaaaggacgagaggctgcccccaaccaggaaccacttcactttg
accggactgacaccagagacagagtatcaggtgaacgtgtatgctgtcagcaacaaccag
gagagtcatcctctgactggcacacaggccaccatctctgatgctcccactgacctggag
gtaacatcgtccaccccgtccagcatcaccattcgctgggacgccccctctgtcacagtg
aagaactacaggatcacctatagaggcacaagcggtgaggctcctcaagagttcagcatc
cctggcagtcagaccaccgccaccatcaccggtcttaagcccggtattgaatacaccatc
acagtctatgccgttactggaagaggagacagccccgcttccaacacccctgtctacatc
atgcacaagactgatacagagtcccccaccaacatgaaactgactgatgtgagtcacaac
gctcttacagtgcgctggtctcctgctcagggaccaatcagaggctacagaatcaccagt
gtccccaaaaatggccttgggccatcctactctgaggtggtagctcctgatcagactcag
atgacattcacaggtctgatgcccactgttgagtatgttgtgagtgtctatgccctgggc
aacgatggacaaccctcctcccctgtggtggagaacactatcacggctatggaccgtccc
aaggacctgaccttcactgacatcaactccaactccatgcgcatcacttgggacagtcca
gacgggacagtgacatcatatcgcgtcctgtactccagctcagaggagagtgagagggag
ctgtatccagcacccagaggtgaccaggacactgtggttctgagaaaccttcgcccaggg
acagagtacactgtcaaagtcatcgccctccatggccgcacacccagcacacctttggtg
ggaacccaagccacagtgatccctgctccgaccagactgatggtctcagaggtcggtcct
tccaccttcaccgtgtcatggcaagcccccaacgcacgcctgtcaggctaccgcgtggta
gtcaaccctaagaacatcaacggccccaccaaagagatgaatgttgctccggacaccacg
cgcgttgttgtaccagggctcatggtggctaccacatatcagatacatgtctatgctctg
aagaactctgtcaccagcagaccactggacggagagacaaccacactggaagatgtaagt
cctcctcggcgtgtgcgcatctctgatatgaaggactcttcttttacactgacctggaaa
gccaaggtggaaaccatcactggttacctcattgacgccacgccccttagtggcttgcac
cccaccattagcagcaccatctcgggagcagcaaacacctacactctcacaggtctgcag
ccaggcacaacatactctgttaacctgtatactcttaagggcaacacaaagagcgacccg
tttacgctcatcattacaacagctaaagcagtggtccaggctcccaccaacctccagttc
acatctttgacccccacctccatctccttcacctggcagccacctgccacacccatcaca
ggatattacgtcacctatgaggagtccggaggagcaccacgagagctcaacccacgaccc
cacgccggccaaaactacgccaccatatctggcctcaaaccagccaccgagtacatcatc
aagatcatcgcaatccagaacacacagaggagcacacctctgtttggcagaatcaggact
caaccagactccctgcttgtcttgcctctgccccaccgccccggaggtattgatgacagg
ctggatgtgcctgataccaacttggacaacagagtccaggtagtgggcaacaatggccag
gatgggcatgaagatcagagccagaatgtggagtacacagaatacaacaacaacggagac
aacaaccgaaataatgggaacggtggcaacccacagtctccctatggccaagtccgtgag
cccctagtctttgtgccccttcctgatgcagagggccgcagactgcccatcctgaagctg
aacatgccgattggctccacgtttggtaacgaaacgggagtgccgcaggaggcccaaact
cgcacatccatctcctggaagccttacaagcagagcacggcctacatggtgtcctgccat
cccctcagtcacttaaatgagaagatgttccaggtccgccttccaggcacagccactact
gcgaccctgattggactctcccccggagaaaactataatgtgatcgtagaggctctgatg
ggggcgctcaaacacaaaatactggagcaaattgtcactgccggaaacacaatcccagag
ggagtgccctccacgaaggactcgtgctacgacgcctttacttcaacctaccatgatgtt
ggtggtgagtgggagcggatgtctgagacgggcttcaagctgtggtgcaggtgtctgggt
ctggggactggccacttcagatgtgattcatccaagtggtgccatgacagcggcaacaac
tatcgcgttggagagaagtgggaccgccgtgcagaaaatggtcacttgatgagctgtact
tgcttgggaaatggcaaaggagagttcaagtgtgaaccacatgattcggtctgctatgat
gatggcaaaacctaccaggtgggaaaccagtggcagaaggagtacctgggtgccatctgc
acctgcacgtgctttggaggacagcagggctggcgatgtgagaactgcctcagaccaggt
ggtgatgtcgatgccagtctgctgcagcctgtgagatatggaaacaaactacaaaatatc
cattgccccattgagtgcctccgacctgacctgctggcagacgcacatgctcctccaaat
cctttggagtaa
DBGET
integrated database retrieval system
