KEGG   Clinocottus analis (woolly sculpin): 137787118
Entry
137787118         CDS       T10471                                 
Symbol
alyref
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana03013  Nucleocytoplasmic transport
cana03015  mRNA surveillance pathway
cana03040  Spliceosome
cana05168  Herpes simplex virus 1 infection
Brite
Messenger RNA biogenesis [BR:cana03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     137787118 (alyref)
    TREX complex
     137787118 (alyref)
Spliceosome [BR:cana03041]
 Complex C
  Other components
   EJC/TREX
    137787118 (alyref)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    137787118 (alyref)
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_5 RRM_occluded
Other DBs
NCBI-GeneID: 137787118
NCBI-ProteinID: XP_068435487
LinkDB
Position
Unknown
AA seq 269 aa
MADKMDMSLDDIIKQNRQQRGGGRGGRGRGRGGSGGGRGGPGRLGVSSGGFGGRGSGSGP
MRSRQNLSRARGRPTPYGRPKQLPDKWQHDMYDNGFSGFSGPAGGGGGAGVETGGKLLVS
NLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERRTDAHKAMKQYNGIPL
DGRPMNIQLVTSQIDTQRRPMQGLNRGGGGGMNRPRGAGFRGMQRGRGGRGAGSAGGRGR
GGRGGAAKQMSAEELDAQLDAYNARMETS
NT seq 810 nt   +upstreamnt  +downstreamnt
atggcggataaaatggatatgtctctagacgacattatcaagcagaacaggcagcagaga
ggtggaggccgcggcgggagaggccgaggccgcggaggctccggcggcggacgaggaggc
cccgggcgtctgggagtcagcagcggtggatttggaggccgaggcagcggatccggcccc
atgaggagccggcagaacctgagccgcgctagaggcagaccaacgccttacggcaggcct
aaacagcttccagataagtggcagcatgacatgtatgacaacggcttcagcggcttcagt
ggccctgctggaggtggcggaggagctggtgtggagactggagggaaacttcttgtctcc
aatctggattttggcgtctcggatgcagacattcaggaactcttcgctgaatttggaact
ctcaaaaaagctgcagttcattacgacagatcagggagaagtctggggacagcagatgtc
cactttgaaaggaggacagatgcccacaaggccatgaaacagtacaatggcatccctctt
gatgggcggcctatgaacatacagcttgtcacatcacagattgacacacagaggcgacct
atgcagggtctgaacagagggggtggcggaggcatgaacagaccccgtggggcaggcttc
agaggcatgcagagaggccgtggaggacgtggggcaggcagtgctggaggaagaggtcgg
ggcggccggggtggggctgccaaacagatgtcagcagaagaacttgatgctcagttagac
gcctacaatgccaggatggaaaccagctaa

DBGET integrated database retrieval system