Clinocottus analis (woolly sculpin): 137787177
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Entry
137787177 CDS
T10471
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03440
Homologous recombination
cana03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137787177 (top3a)
03460 Fanconi anemia pathway
137787177 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cana03032
]
137787177 (top3a)
03400 DNA repair and recombination proteins [BR:
cana03400
]
137787177 (top3a)
Enzymes [BR:
cana01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
137787177 (top3a)
DNA replication proteins [BR:
cana03032
]
Eukaryotic type
DNA Topoisomerases
137787177 (top3a)
DNA repair and recombination proteins [BR:
cana03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
137787177 (top3a)
FA (Fanconi anemia) pathway
137787177 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
137787177
NCBI-ProteinID:
XP_068435572
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MLVHLLGRAVLRSGLHRLVLQRRCFCSAESDRCPGTPQPADMNRSRAQIKRVLCVAEKND
ASKSIAAIMSSGTSRRREGMSKFNKIYEFEYHLFGQNVTVTMTSVSGHLLSLEFKAQFQK
WYSCNPVQLFDAEVEKYCPDNMKQIKWTLEKEARQCQALVIWTDCDREGENIGFEVIDVC
KAVKPNLQVFRAKFSEITPNSIRRACETLMEPDAKISDAVDVRQELDLRIGASFTRFQTL
RLQKIFPESLANQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVLHKVEEDTVEFS
WKRNRLFNHTACLVLYQLCMEDPIATVTSVTSKPKSKWRPLPLDTVEMEKLASRKLKISA
KDTMKIAEKLYTQGYISYPRTETNIFPTNLALGPLVEQQTQDPVWGTFAQRVLDQPGGPN
PRQGKKSDQAHPPIHPTKHSGTLQGNEGRLYEFIVRHFLACVSQDALGHETVVDIDIAHE
NFSTSGLMIIARNYLDVYPYDRWSAKVIPVYEQGSQFQPSAVEMTDGQTSPPQLLTEADL
ISLMEKHGIGTDATHADHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPN
LRAELEADLKLVSEGRKDKRSVLQHHIKKYKTVFIESVRKAKKLDEALTPYLGAAQEIAE
AEQHFDMEMMLPVRKCPHCARDMVLKKKRDGNSTYLSCTGYPACKTAVWFPDTVLEVSRD
DSICPTCQPHPVHMLKLKFRRGSLPPMMDLEFVGCIGGCDETLREVLDLKYLWAGGGSGM
GEGGGGLGGGWGGGMSGGGGGGDAPWPPRPPQSNPRPSLPPVPSWIPQPPPPARGGGVGA
DSNRDAIVCNCGQDAVLLTVRKDGPNQGRQFYKCNAGSCNFFLWADQPSEQEEPQSWRPA
LQAPPRISGGFRNPPGGGREQERGAGGHAGLTMCNCNEAAVTRTVQKDGPNKGRVFHTCG
KPRDQQCGFFLWADENEPPPGVFGGGFNNGGDGGKKGRKVMGDAAANKPPAARKQRTCGI
CHMPGHTRVTCPQR
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtgcaccttttagggagagctgtacttcgatccggattgcaccggctcgtgctc
cagaggaggtgcttctgttcggcggagagtgaccggtgtccgggcacaccgcagccggca
gacatgaaccgcagccgggctcagatcaagcgggtcctctgcgtggccgagaagaacgac
gcgtccaaaagcatcgcagcgatcatgtccagcggcacgtccagaaggagagaggggatg
tcaaagtttaataaaatctatgagtttgaatatcatctctttggtcagaatgtgacggta
acaatgacttcagtatcgggacatttactgagtttggagtttaaagcacagttccagaaa
tggtacagttgtaatcctgtgcagttgtttgatgctgaggtagagaagtactgtccagat
aacatgaaacaaatcaagtggacgttggagaaagaggcgaggcagtgtcaggccttagtc
atctggaccgattgtgacagagagggagaaaatattggctttgaagtcatagatgtctgc
aaagcagtgaagcccaatttacaagtatttcgggccaagttttctgagatcacccccaac
tctattcggagagcttgtgagacactaatggagccagatgctaaaatcagcgacgctgtc
gatgtccgtcaggagctggacctgcgaataggcgcgtccttcactcgattccagacgctt
cgcctgcagaagatctttccagagtctctggccaatcagctgatttcatatggcagctgt
cagtttccaactctaggatttgtggtggagcgttttaaagccatccaggctttcatacct
gagactttctacaagattaaagtgctgcacaaggtggaagaggacactgtcgagttcagt
tggaaaagaaaccgtctcttcaaccacacagcttgcctggtgctctaccagctctgcatg
gaggatcccatagcaacagtcacctcagtaaccagcaaacccaagagcaagtggagaccg
ctgcctttggacacggtggaaatggaaaaacttgcatctcggaaactaaaaataagcgcc
aaagacaccatgaaaattgcagagaaactctatacccaggggtatatcagctaccctcgg
acagagacaaacatttttcctacaaacttggctctcggtcccctggtggagcagcagact
caagacccggtctgggggacgttcgcccagcgcgtgcttgaccagcctgggggtcccaac
ccacgacagggcaagaaatcagaccaagcccacccccccatacaccccaccaagcactcg
ggcacactgcagggcaatgaaggacgtttgtatgagttcattgtccggcacttcctggcc
tgtgtatcccaggatgctttggggcatgagactgtggtggacattgacatcgcccatgag
aacttctccacctcgggactcatgatcattgcaaggaactacttggacgtttacccgtat
gacaggtggagcgctaaggtgattccagtgtatgagcaaggctctcagttccagccctct
gctgtcgagatgacggacggacagacgagtcctccgcagctgctcactgaagccgacctc
atatccctgatggagaagcacggcatcggcaccgatgcaacccatgcagatcacatcgaa
accatcaagagccgcatgtacgtgggcttgaccgctgatcagaggtttctgcctggagag
ctcggcatgggactggtggagggttacaactccatgggatatgagatgtccaaaccaaac
ctgcgcgctgaattggaggctgacctcaagctggtatcggagggcaggaaggacaaacgg
agcgtgctgcagcaccacatcaagaaatacaagaccgtcttcatcgagtccgtcaggaag
gcgaagaagttggacgaagccctgacgccctacctgggggcagctcaggagatcgctgaa
gcagagcagcattttgacatggagatgatgctgccggtcaggaagtgccctcactgcgcc
cgggacatggtgctgaagaagaagagggatggaaacagtacgtacctctcctgcacgggc
tacccagcatgcaagacggccgtgtggttccccgacacggtgctggaggtgagcagagac
gacagcatctgtcccacctgtcagccgcacccggttcacatgttgaagttgaagttccgc
aggggcagcctcccccccatgatggatttagaatttgttggctgcatcggtggatgtgac
gagacgctcagagaggtgctggacctgaagtacctatgggcagggggaggaagtgggatg
ggtgaagggggaggaggcttgggtggaggatggggaggagggatgagtggcggtggagga
ggaggagacgctccatggccccccagaccaccgcaatcaaatcctcgtccttcccttccc
ccggtcccctcctggatcccgcagccaccacctccagcaaggggcggtggtgtcggtgca
gacagcaaccgcgatgccattgtgtgtaactgtggtcaggatgcagtcctcctaaccgtg
cgcaaagacggccccaaccaaggccggcagttctacaagtgcaacgctggcagctgcaac
ttcttcctgtgggcggatcagcccagtgagcaggaggagccgcagagttggcgtcctgcg
ctgcaagccccaccgaggatctctggtgggttcaggaacccccccggaggaggcagagag
caggagaggggtgcaggaggacatgcgggactgacgatgtgtaactgcaacgaggcagcg
gtgacacgcacggtgcagaaggacggtcccaacaagggccgggtgttccacacttgtggg
aaaccaagagaccagcagtgtggcttcttcctgtgggctgatgagaacgaacctccacca
ggtgtgtttggtggtggatttaataatggtggcgacggcgggaagaagggtaggaaggtc
atgggagatgccgccgcgaacaaacctccagctgcaaggaaacagcgtacctgcggcatc
tgccacatgccaggacacacccgagtcacctgcccccagcggtga
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integrated database retrieval system
