KEGG   Clinocottus analis (woolly sculpin): 137787261
Entry
137787261         CDS       T10471                                 
Symbol
pcdh17
Name
(RefSeq) protocadherin-17 isoform X1
  KO
K16499  protocadherin delta 2
Organism
cana  Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:cana00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cana04515]
    137787261 (pcdh17)
Cell adhesion molecules [BR:cana04515]
 Cadherins
  Protocadherins
   137787261 (pcdh17)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_CELSR2_9th PepSY Cadherin_C_2
Other DBs
NCBI-GeneID: 137787261
NCBI-ProteinID: XP_068435723
LinkDB
Position
Unknown
AA seq 1141 aa
MYLSIFFFLLLWAQALTLKNLNYSVPEEQGPGTVIGNIAKDARLGIEQVGSGGQGKKANF
RVLENSAPHLMDVDPTSGLLYTKQRIDRETLCKRNPKCQLSMEVFANDKEICMIKIDIQD
INDNSPAFPSDQIDIDISENAVPGTRFPLTSAHDPDAGENGLKTYQITRDDYNLFSLEVK
SRGDGTKFPELVIQRPLDREERNHHTLILSATDGGEYPRSGTMQINVKVIDSNDNSPVFD
LPSYVVEIPENSPPGKVLIDLNATDPDEGNNGQVVYSFSGYAPERIRELFSIDSRTGVIK
IQGEIDYEESPVIEIDIQAKDLGPNPIPGHCKVTVKVLDRNDNWPSIGFVSVRQGAISEA
APPGTVIALVRVTDKDSGRNGQLQCRVLGNVPFKLEENYDNFYTVVTDRPLDREVQDEYN
VTIVAKDNGIPPLNSTKSFTVKILDENDNVPRFTKSVYLLQIPENNIPGEYLGSVLAHDP
DLGQNGTVYYSIVNSNVSGGDVNTYVNVNAANGAIYAVRSFNYEQIKYFDFKVLARDAGS
PHLESNATVRISVLDVNDNIPVIVLPLLLNDTAEIHVPRNVGVGYIVTTVRAVDNDYGES
GRLTYEISDGNEEHLFEIDPVTGEVRTAHPFWDDVNPIVELIIRVSDHGKPTLTAAARLI
VKASNGRPPDGLPRTKDNQNWDMSLPLIVTLSIISIMLLAAMVTIAIKCKRENKEIRTYN
CRIAEYSHPQLGKGKKKKINKNDIMLVQSEVEERDAMNVMNVVSSPSLATSPMYFDYQTR
LPLSSPRSEVMYLKPTANNLSVPQGHVGCHTSFTGPVTSTTDTPTNRMSIIQTDNFPTEP
NYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKLKAT
GVKPPPLEQDEDCVNCTEECRVLGHSDRCWMPQFPAGGNQAEGVDYRNNMFVPAGMETVP
ETETYETVNPNGKKTFCTFGKERRDHTILVANVKPYLKAKRALSPLLQEVPSASSSPTKG
CSTMSPCSSVKSPADGAEGKPPPATCSGHYGPPDGQYLSPTKQTRDQGVYPPMSPSDPVA
KVLAEARSRISQEATGEMECVLEQVEPDGSRDRMDADQVVRDIDKLLQDCRGSEASGTLR
K
NT seq 3426 nt   +upstreamnt  +downstreamnt
atgtatctttctattttctttttcctcctgttatgggctcaagccctgacattgaaaaac
ttgaattactctgtcccggaggagcaaggtccgggcacagtgattgggaacattgccaaa
gatgcaagactcggaatcgaacaggttgggtcgggaggacagggtaagaaagccaacttc
agggtgctggagaactccgctccgcatctaatggatgtggaccccacaagcgggctgctg
tacacaaagcagcgcatcgacagggagaccttgtgtaagagaaaccccaagtgccagctc
tccatggaggtgtttgccaacgacaaggagatctgcatgatcaaaatagatattcaggac
attaacgacaactcgcccgccttcccctcggatcagattgatattgacatttccgaaaac
gcagtgccagggacacgctttcccctgaccagcgcgcatgacccagatgcaggggagaac
ggcttgaaaacctatcaaataacacgcgatgactacaatctcttttccttggaggtaaag
tcccgcggggacgggactaaattcccggaattagttattcaacggccattggaccgagaa
gaacgaaaccatcacacccttatcttgtcagccacagatgggggtgaatatccccgttca
ggtaccatgcagataaatgttaaagtgatcgattccaatgataacagccccgtgttcgac
ctgccttcgtacgtcgtggaaattcctgaaaactcacctcctggtaaagtgttgatcgat
ttaaacgccacggatcctgatgagggcaacaatggacaagtagtctattcttttagtggc
tatgccccagagagaatccgggagctcttttccatagattccagaacgggggtcataaag
attcagggtgaaattgactacgaagagagccccgttatcgagattgacatccaggcaaag
gatctaggtcccaatccaatcccaggtcattgtaaagtcactgttaaagtgctggacagg
aatgataactggccgtctataggctttgtgtctgtgagacagggggctatcagcgaggca
gcacctccaggcactgtcattgctctggtccgtgtcacagacaaggactcgggcaggaat
gggcagcttcagtgcagagtattgggtaatgtcccttttaaacttgaggagaattatgat
aacttctatacagtggtgacagacagacccttagacagagaggtgcaggatgagtacaat
gtcaccatcgtggccaaagacaacggcattcctcctctaaactccacaaaatccttcacg
gtgaagattctggatgagaatgacaacgttcctcgctttaccaagtcagtttaccttctt
caaatacctgagaacaacatccctggggagtacctcggttcagttctggcacatgatccg
gacctcggccagaacggcacggtgtactacagcatagtcaactccaatgtgagtgggggt
gatgtcaacacctacgttaatgtgaacgctgccaacggagccatctatgcagtgagatcg
tttaactatgagcaaatcaaatattttgacttcaaggttcttgcgagagatgcaggctct
ccacacctggagagcaatgcgacagtgcgcatcagtgttctggatgtcaatgacaacatc
ccagttatagttctgccgctgctcttaaacgacacagctgaaatccatgtgccgcgcaac
gttggcgtcggctacattgtcaccacggtgagggcggtggataatgactatggcgagagt
gggaggctcacatatgagatctctgatggcaacgaggagcacctgtttgagattgatcca
gtgaccggggaggtgcgaacagcccacccattctgggacgacgtgaaccccattgtggag
ctgatcatccgagtatctgaccacggcaagccgacactcactgccgccgccaggctcatc
gtcaaggcgtccaacggacgtcctccagacgggctgccacgcacaaaggacaatcagaac
tgggatatgtccctgcctcttattgtaactctcagcatcatatccatcatgctcctggca
gctatggtgaccatagcgatcaagtgcaagcgagaaaacaaggagatccgtacctataat
tgtcgaattgctgagtactcacaccctcagctcgggaaagggaagaagaagaagattaac
aagaacgacatcatgctggtgcagagcgaggtggaggagcgggatgccatgaatgtgatg
aatgtggtaagcagcccttccttggccacctctcccatgtactttgactaccagacacgc
ctgccactcagctcaccaaggtcagaggtcatgtacctcaagcccactgccaataacctc
agcgtgccccaaggccacgtgggatgccacaccagcttcacaggcccagtcaccagcact
acagacacacctactaaccgcatgtccatcatacagacagacaatttccccaccgagcct
aattatatgggtagcagacaacagtttgttcaaagtagttcgacattcaaagacccagag
cgagccagcctcagagacagtggtcatggtgacagcgaccaggctgacagcgaccaggac
accaacaaaggctcctgctgcgacatgtctgcaaaagaagccctcaagttgaaggctaca
ggcgtgaaacccccgcctttggaacaagacgaggactgcgtgaattgtacagaggagtgc
cgagtactgggtcattctgaccgctgctggatgccccagttccccgctggaggaaaccag
gcagagggtgtcgactaccgcaacaatatgttcgtgccagcgggcatggagactgtgccc
gagacagagacctacgagactgtcaaccccaatggcaagaagacgttctgtacatttgga
aaagagaggcgtgaccacaccatcctggtcgccaacgtcaagccctacttgaaggcgaaa
cgagccctcagcccactgctccaagaggtaccttcagcttccagcagtcccaccaagggc
tgctccaccatgtctccttgctcttcagtcaaaagcccagctgacggagctgaaggcaaa
ccgcctcctgccacctgctccggccactacgggcctcctgatggtcagtacctgtcaccg
accaaacaaaccagagaccagggggtctacccacccatgtctccctcagaccccgtggcc
aaggtgctcgcagaggcccgctctaggatcagccaagaggcgacgggggaaatggagtgt
gtcctggagcaggtcgagccggacgggagccgtgatagaatggacgctgaccaggtggtg
agagacatcgacaaactattgcaggactgcagaggaagtgaggcctctggaacactcagg
aagtga

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