Clinocottus analis (woolly sculpin): 137787261
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Entry
137787261 CDS
T10471
Symbol
pcdh17
Name
(RefSeq) protocadherin-17 isoform X1
KO
K16499
protocadherin delta 2
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cana04515
]
137787261 (pcdh17)
Cell adhesion molecules [BR:
cana04515
]
Cadherins
Protocadherins
137787261 (pcdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
137787261
NCBI-ProteinID:
XP_068435723
LinkDB
All DBs
Position
Unknown
AA seq
1141 aa
AA seq
DB search
MYLSIFFFLLLWAQALTLKNLNYSVPEEQGPGTVIGNIAKDARLGIEQVGSGGQGKKANF
RVLENSAPHLMDVDPTSGLLYTKQRIDRETLCKRNPKCQLSMEVFANDKEICMIKIDIQD
INDNSPAFPSDQIDIDISENAVPGTRFPLTSAHDPDAGENGLKTYQITRDDYNLFSLEVK
SRGDGTKFPELVIQRPLDREERNHHTLILSATDGGEYPRSGTMQINVKVIDSNDNSPVFD
LPSYVVEIPENSPPGKVLIDLNATDPDEGNNGQVVYSFSGYAPERIRELFSIDSRTGVIK
IQGEIDYEESPVIEIDIQAKDLGPNPIPGHCKVTVKVLDRNDNWPSIGFVSVRQGAISEA
APPGTVIALVRVTDKDSGRNGQLQCRVLGNVPFKLEENYDNFYTVVTDRPLDREVQDEYN
VTIVAKDNGIPPLNSTKSFTVKILDENDNVPRFTKSVYLLQIPENNIPGEYLGSVLAHDP
DLGQNGTVYYSIVNSNVSGGDVNTYVNVNAANGAIYAVRSFNYEQIKYFDFKVLARDAGS
PHLESNATVRISVLDVNDNIPVIVLPLLLNDTAEIHVPRNVGVGYIVTTVRAVDNDYGES
GRLTYEISDGNEEHLFEIDPVTGEVRTAHPFWDDVNPIVELIIRVSDHGKPTLTAAARLI
VKASNGRPPDGLPRTKDNQNWDMSLPLIVTLSIISIMLLAAMVTIAIKCKRENKEIRTYN
CRIAEYSHPQLGKGKKKKINKNDIMLVQSEVEERDAMNVMNVVSSPSLATSPMYFDYQTR
LPLSSPRSEVMYLKPTANNLSVPQGHVGCHTSFTGPVTSTTDTPTNRMSIIQTDNFPTEP
NYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKLKAT
GVKPPPLEQDEDCVNCTEECRVLGHSDRCWMPQFPAGGNQAEGVDYRNNMFVPAGMETVP
ETETYETVNPNGKKTFCTFGKERRDHTILVANVKPYLKAKRALSPLLQEVPSASSSPTKG
CSTMSPCSSVKSPADGAEGKPPPATCSGHYGPPDGQYLSPTKQTRDQGVYPPMSPSDPVA
KVLAEARSRISQEATGEMECVLEQVEPDGSRDRMDADQVVRDIDKLLQDCRGSEASGTLR
K
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgtatctttctattttctttttcctcctgttatgggctcaagccctgacattgaaaaac
ttgaattactctgtcccggaggagcaaggtccgggcacagtgattgggaacattgccaaa
gatgcaagactcggaatcgaacaggttgggtcgggaggacagggtaagaaagccaacttc
agggtgctggagaactccgctccgcatctaatggatgtggaccccacaagcgggctgctg
tacacaaagcagcgcatcgacagggagaccttgtgtaagagaaaccccaagtgccagctc
tccatggaggtgtttgccaacgacaaggagatctgcatgatcaaaatagatattcaggac
attaacgacaactcgcccgccttcccctcggatcagattgatattgacatttccgaaaac
gcagtgccagggacacgctttcccctgaccagcgcgcatgacccagatgcaggggagaac
ggcttgaaaacctatcaaataacacgcgatgactacaatctcttttccttggaggtaaag
tcccgcggggacgggactaaattcccggaattagttattcaacggccattggaccgagaa
gaacgaaaccatcacacccttatcttgtcagccacagatgggggtgaatatccccgttca
ggtaccatgcagataaatgttaaagtgatcgattccaatgataacagccccgtgttcgac
ctgccttcgtacgtcgtggaaattcctgaaaactcacctcctggtaaagtgttgatcgat
ttaaacgccacggatcctgatgagggcaacaatggacaagtagtctattcttttagtggc
tatgccccagagagaatccgggagctcttttccatagattccagaacgggggtcataaag
attcagggtgaaattgactacgaagagagccccgttatcgagattgacatccaggcaaag
gatctaggtcccaatccaatcccaggtcattgtaaagtcactgttaaagtgctggacagg
aatgataactggccgtctataggctttgtgtctgtgagacagggggctatcagcgaggca
gcacctccaggcactgtcattgctctggtccgtgtcacagacaaggactcgggcaggaat
gggcagcttcagtgcagagtattgggtaatgtcccttttaaacttgaggagaattatgat
aacttctatacagtggtgacagacagacccttagacagagaggtgcaggatgagtacaat
gtcaccatcgtggccaaagacaacggcattcctcctctaaactccacaaaatccttcacg
gtgaagattctggatgagaatgacaacgttcctcgctttaccaagtcagtttaccttctt
caaatacctgagaacaacatccctggggagtacctcggttcagttctggcacatgatccg
gacctcggccagaacggcacggtgtactacagcatagtcaactccaatgtgagtgggggt
gatgtcaacacctacgttaatgtgaacgctgccaacggagccatctatgcagtgagatcg
tttaactatgagcaaatcaaatattttgacttcaaggttcttgcgagagatgcaggctct
ccacacctggagagcaatgcgacagtgcgcatcagtgttctggatgtcaatgacaacatc
ccagttatagttctgccgctgctcttaaacgacacagctgaaatccatgtgccgcgcaac
gttggcgtcggctacattgtcaccacggtgagggcggtggataatgactatggcgagagt
gggaggctcacatatgagatctctgatggcaacgaggagcacctgtttgagattgatcca
gtgaccggggaggtgcgaacagcccacccattctgggacgacgtgaaccccattgtggag
ctgatcatccgagtatctgaccacggcaagccgacactcactgccgccgccaggctcatc
gtcaaggcgtccaacggacgtcctccagacgggctgccacgcacaaaggacaatcagaac
tgggatatgtccctgcctcttattgtaactctcagcatcatatccatcatgctcctggca
gctatggtgaccatagcgatcaagtgcaagcgagaaaacaaggagatccgtacctataat
tgtcgaattgctgagtactcacaccctcagctcgggaaagggaagaagaagaagattaac
aagaacgacatcatgctggtgcagagcgaggtggaggagcgggatgccatgaatgtgatg
aatgtggtaagcagcccttccttggccacctctcccatgtactttgactaccagacacgc
ctgccactcagctcaccaaggtcagaggtcatgtacctcaagcccactgccaataacctc
agcgtgccccaaggccacgtgggatgccacaccagcttcacaggcccagtcaccagcact
acagacacacctactaaccgcatgtccatcatacagacagacaatttccccaccgagcct
aattatatgggtagcagacaacagtttgttcaaagtagttcgacattcaaagacccagag
cgagccagcctcagagacagtggtcatggtgacagcgaccaggctgacagcgaccaggac
accaacaaaggctcctgctgcgacatgtctgcaaaagaagccctcaagttgaaggctaca
ggcgtgaaacccccgcctttggaacaagacgaggactgcgtgaattgtacagaggagtgc
cgagtactgggtcattctgaccgctgctggatgccccagttccccgctggaggaaaccag
gcagagggtgtcgactaccgcaacaatatgttcgtgccagcgggcatggagactgtgccc
gagacagagacctacgagactgtcaaccccaatggcaagaagacgttctgtacatttgga
aaagagaggcgtgaccacaccatcctggtcgccaacgtcaagccctacttgaaggcgaaa
cgagccctcagcccactgctccaagaggtaccttcagcttccagcagtcccaccaagggc
tgctccaccatgtctccttgctcttcagtcaaaagcccagctgacggagctgaaggcaaa
ccgcctcctgccacctgctccggccactacgggcctcctgatggtcagtacctgtcaccg
accaaacaaaccagagaccagggggtctacccacccatgtctccctcagaccccgtggcc
aaggtgctcgcagaggcccgctctaggatcagccaagaggcgacgggggaaatggagtgt
gtcctggagcaggtcgagccggacgggagccgtgatagaatggacgctgaccaggtggtg
agagacatcgacaaactattgcaggactgcagaggaagtgaggcctctggaacactcagg
aagtga
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