Clinocottus analis (woolly sculpin): 137787502
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Entry
137787502 CDS
T10471
Symbol
arid1b
Name
(RefSeq) AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137787502 (arid1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cana03000
]
137787502 (arid1b)
03021 Transcription machinery [BR:
cana03021
]
137787502 (arid1b)
03036 Chromosome and associated proteins [BR:
cana03036
]
137787502 (arid1b)
Transcription factors [BR:
cana03000
]
Eukaryotic type
Helix-turn-helix
ARID
137787502 (arid1b)
Transcription machinery [BR:
cana03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137787502 (arid1b)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137787502 (arid1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
137787502
NCBI-ProteinID:
XP_068436126
LinkDB
All DBs
Position
Unknown
AA seq
2275 aa
AA seq
DB search
MAAQVASAPTRTNNKNKKLSSGLGPDLNSGKSGGGGTVQRTGPMLGAGDGTLNNVDHHRR
NELNMVHSTSTTHNASDGHDKDGNNLTSATASTNSTTSSMEAGLIANHKLKCVGSGDPTQ
SQPPPQQQPPPQFGQFAPHQQRQIQSNNTANNNGQGPRGDRAMDHQHHGGKENLLGGQGE
PQQQHMPGKGEGDLTCKPAERMMGTRYEHSNLGPTSNNSEFNNNYYTSRPCYEQHGGQQQ
QSSGMGITHSSAHNSMENSHEAGYHNSQYNQYPAYRAGYGGGAYGMMGPSGCRQPGNMMM
GSNSSASHGKSPLAAASGGFQRFPGQSQQQHPSGATPTLNQLLTSPSPMMRGYGGAYQDY
SGSTAQQQAGMGLGKDAGQQYGGNSAHGWGGQQRNHPHAMSPGNGGQGLGRTQVSSMDFM
AMKRSQLYSMANNPYSTPQQPGGGPYPASQPYTSPPPHRYPMSMQGRGQMGMGGMQYPQQ
QQVAPYGQQGMGGYSQQQQQQQQQQQQQQQAGQQGTPPYFSPPQQTPPGQTQSPYLQPRP
PPQQEAQQETYVTRGPAPGNSGKANNEDGVSQDRPSSLPDLSGSIDDLPTGTEAGLGSAV
SVGGSSSSSSSSSQGEQGGASNQGQSPFSPHASPHLPSQRSGPSPSPVGSPAGSTQSQQS
RSGSGPISPASGPPANTTAPGSAMAPQISGNGPEGSHPPITRSPMAQEKGFMSNMQRNQG
SSQFASPQSGPPMSPHPSPGGPLYSVVGPYSQSGTTGPYGPQGSQYGHQGNYPRPSNYGG
GPASTSYSGPGPGMTNSLGMNASSPMHGQGPGQPIPVGRSHGPGSQNRVYPPMAPSSPGM
PQPAGPGMGPPSLGNSNRKAQEAAAAAMPGSANSTHNRQGSYQGPGINQASTIATTVPNS
QPTGNNNSAMGNAQGPAYNMPPSGAMGLSGDGMMSPDGKSKTDVKDDSGPANEPHKPKLQ
DGYSNNNSSSSSSQQCVSQPATPGSALPVPSPLSPSPASLSSYHGDDSDSISSPPWPIKT
PSSPKANPNSSSLSGERITRLFELGVEPERRGWVERYLTFMEERGTPVTQLPAVGKKPLD
LWKLYIAVREIGGLAMVNKNKKWRELSTTLNVGTSSTSASSLKKQYIQYLFAYECKMERG
EEPPADSSSSGSSSVAGGDSRKQVKIQPPSPANSGGSLQGPQTPLSSGSSSTAEAVGDLK
PPTPATTPLGQVTPLPPNRSSVSIQDPFSEVSDPAFQKRAASLPASAPYQQGLSMPDMMM
RMQYDAKDPFAGMRKMAGADPYIPGQMPGGGMQDMYGRPPSALSMSQRSQYPYGPGYDRR
PDHVMGMEGNMGPPGSQNNMGPSNSEGSMYSSSRYPSQQRHDGYSQQYPSMPYGMHPSGM
YPQQQQGYKRPMDGMYGPPPKRHESDMYAMQYANQQPDMYNHYGGGYSGPEHRPIQGQFP
YPYPRDRMGPSGQSQHSMMGGGPTPNHAADGPNVWPSRTELGYPYPNRQGPPSQMPPYGS
MGRDDMDGRPGQEQWHRQSAYMSSSGGMTPLSSRQPSSYSNSPSMANHLSRAPSPGAFQR
SMDSRMSPKGPFMSPMKMPKPGMTMMGSQGHFPPNLRRDLNYPPGSVEATMPILKPRRKL
TSKDTGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVGSFTLSQLPGFLELIVEY
FRRYLIEIFGILEEFEVGTVAQKSLLDPAAEQKEEVIPDQETDSNAHPEPESAPAEEAQA
EQAGGIVEEAQPISTAEPESAEVSSEKEESEINITKEDTNDEDREKEGEEKESEKGAENK
RECVDQPVAELKPKLKQASKYDKLPIKIVHKEDLFEDMTERLGYVTEFTSGLLHWQAGGG
DSTAHIQTQFEPRSEPPPRAEGKTGRENKEENTMDDGKKQHITATIDDVLCARVDALSYA
HPARSLPSYPFRVHPDGEPDHITLLEDEPRCLDEPPLSASSAWQDSLAKRCLCVSNIVRS
LSFIPGNDLDMSRHPALVLLLGRLLLLHHQHPERNRSPPSYQRDEQKEQGLSSSKEEWWW
ECLSLLRENAMVSLSNISGQLDLSTYPDTICLPILDGLLHWMVCPSAEAQDPFPSAAPHS
QPTPQRLVLECLCKLSIQAGNVDLLLATPPFSRQEKLFTILVRYASQRKAQVYREMAVAV
LSHLAQGDPTAARAIAMQKGSVGNLVGFLDDGVSMAQYQQNPHSLLHMGHPPMDPPSINM
MCRAAKGLLAMAKVEENKREFALYESRLLDISISSVLNAGVVALVCQVLFHLGKL
NT seq
6828 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagttgcatcggctccgaccagaactaataacaaaaataagaaattatcc
agcggtttgggtccggacctcaattcggggaaatcaggaggaggagggaccgtacagcgg
actggacctatgctcggtgccggagatgggactctgaataatgtagaccatcatcgccga
aacgagctcaacatggttcattcaacttccaccactcacaacgcgtcggacggccatgac
aaggatgggaataacctcacgtccgccacggcttcgactaattcaaccacttcctcgatg
gaagcgggtttgatcgcgaaccacaagctgaaatgtgtggggagcggagatcccactcag
tctcagccgccgccgcagcagcagccgccgccgcaattcggccaatttgcgccacatcag
cagcgacagatccaaagtaacaacaccgccaataacaacggccaggggccccgcggggac
cgggccatggatcaccaacaccacggcggcaaagagaacctgttgggggggcagggggag
ccgcagcagcagcacatgccaggaaaaggtgagggggacctcacctgtaaacccgcggag
aggatgatgggtaccaggtacgaacactccaacttgggcccaactagtaacaactccgag
tttaataacaactattacacttcgaggccctgttatgagcaacatggcggccagcagcaa
caaagcagtgggatggggataacgcactcctcggcacacaacagcatggagaactcccac
gaagcagggtaccacaacagccagtacaaccagtacccggcgtaccgggcgggctacggc
ggcggggcctacgggatgatgggcccctctgggtgccggcagcctgggaacatgatgatg
ggcagcaactcctcagcgagccacggcaagtctcccctggcagctgcttcgggtggcttt
cagaggttcccagggcaaagtcagcagcagcatccctcgggggccactccgaccctcaac
caactgctgacgtccccgagccccatgatgcggggctacggcggcgcgtatcaagactac
agcggctccacggcgcaacagcaggccggcatgggcctggggaaagacgcggggcaacag
tatggaggcaactctgcccacggctggggagggcagcaaagaaaccaccctcacgcaatg
agtccaggcaacggagggcaaggcctcggcaggactcaggtgtcctccatggacttcatg
gctatgaagcgctcgcagctctacagcatggccaacaatccttactccactccacagcag
ccagggggcgggccttaccctgctagccagccatacacatcacctcctccacacagatat
ccaatgagcatgcaggggaggggccaaatgggcatgggcgggatgcagtatcctcaacaa
cagcaggtggcgccatatggccagcaggggatggggggctacagccagcagcagcagcag
cagcagcagcagcagcagcagcagcagcaggcggggcagcagggaacccctccgtacttc
agcccccctcagcagacccctccaggccagacccagagcccttacctgcagcctcgaccc
ccgccacaacaggaggcccagcaggagacgtacgtcaccaggggtccggccccagggaat
tctgggaaggccaacaatgaggatggcgtctcccaggaccgcccgtccagtctgccggat
ctgtccggctcgattgatgacctccccactgggacggaggccggcctgggctcagccgtc
agcgtcggtggctcctccagtagcagcagcagcagcagccagggggagcagggaggggcc
agcaaccagggacagtcccccttctcccctcacgcctccccccacctccccagccagagg
agcggaccctctccctcccccgtgggctcacctgcaggctccactcagtcccagcagtcg
cgatccggctctggacccatctcccctgccagcggacccccagccaacaccaccgcacca
ggttctgcaatggccccacagatctctgggaatggaccagaaggatcccacccgccaatc
acccgctcacctatggctcaggagaaagggttcatgtccaacatgcagagaaaccagggt
agctctcagtttgcctctcctcagtccggacctcctatgtccccacacccctcacctggg
ggcccattgtattctgtggtgggaccctactcccagagtggcactacaggcccttacgga
cctcaaggatcccagtatggacaccaaggtaactatcctcggccatccaactacggcggc
gggcctgccagcaccagctacagtggccccggccccggcatgaccaacagtctggggatg
aatgcaagcagccccatgcacggccaggggcccggccagcccatacctgtaggtcgcagc
cacggcccgggcagccaaaacagggtgtacccgcccatggctcccagctcccccggcatg
ccccagccagctgggcccgggatgggccctccttctttgggtaattctaaccgcaaggcc
caggaggcagcagcagctgccatgccgggatctgccaactcaacacacaacaggcagggc
agctatcaaggccctggcatcaaccaggcgagcaccatagctactactgtccccaatagc
cagccaacgggaaacaacaattcagccatgggcaacgcacaaggtcccgcctacaacatg
ccgccttcaggagccatgggactgtcaggagacgggatgatgagcccggatgggaaatcg
aagacggacgtaaaagacgacagtggcccggccaacgagcctcacaaaccaaagctacag
gacggctacagcaacaataacagcagcagcagcagctcccagcagtgtgtgtcccagcca
gccacgccgggcagtgccctgcccgtgccctccccgctctcccccagcccagccagcctg
tcctcgtaccacggagacgacagcgacagcatcagcagccccccttggcccatcaagacc
ccctccagtcctaaagccaacccaaactcctcctccctcagtggggagcgaatcacgcgc
ctatttgagctgggtgtggagccggagaggcggggctgggtggagcgatacctgaccttc
atggaggaaaggggcacgcctgtgacccagcttcccgctgtgggcaagaagccgctggac
ctctggaagctctacatagctgttcgggagataggaggcctcgccatggtaaacaagaat
aagaagtggcgcgagctgtccaccaccctgaacgtgggtacatccagcacctccgccagc
tcgctcaagaagcaatacatccagtatctgtttgcctacgagtgtaagatggagagggga
gaagagccgccggcagacagcagcagcagtggcagcagcagcgtggctggaggggacagc
aggaagcaggtcaagatccagccgccctcacctgctaattcaggcggctccctccaaggc
ccacagacgcccctgtcctctggcagcagctcgacagccgaggcggtgggggacctgaag
ccccccacacccgccaccacccccctgggacaggtcacacctctgccccccaacaggagc
agcgtgagcatacaggaccccttctcggaggtgagcgacccggctttccagaagcgtgct
gcctccctgccggcctcagctccttaccagcagggcctcagcatgcctgacatgatgatg
aggatgcagtacgacgccaaggacccctttgccgggatgaggaagatggcgggagctgat
ccatacataccaggccagatgcccggtggtggcatgcaggacatgtatggtcgacccccg
tctgccttgagcatgagccaacggtcgcagtatccatatggaccgggctacgacaggaga
ccggaccatgtcatggggatggaggggaacatgggtccccctgggagtcagaacaacatg
ggaccctcgaacagtgagggcagcatgtactcttccagtagatacccttcacagcagaga
cacgatggctacagtcagcagtatcccagcatgccatatgggatgcatccatctgggatg
taccctcagcaacagcagggctacaaacggcccatggacggcatgtacggccccccaccc
aagagacacgagagcgacatgtatgccatgcagtacgccaaccagcagccggacatgtac
aaccactacggtggaggctactcaggccccgaacacagacccatccagggacagttcccc
tacccctacccccgcgaccgcatgggtccctcaggtcagagccagcacagtatgatgggt
ggggggcccactcctaaccatgccgccgatggccccaacgtgtggccatccaggacagag
ctcggctatccctaccccaaccgacaggggccgccgtcacaaatgcctccttacggctca
atgggcagagatgacatggacggacgtccggggcaggagcagtggcaccgtcagtctgcc
tacatgtcatcgtcaggaggcatgactcccctgtcctcacgccagccatcttcttattcc
aactctccatccatggccaaccacctgtccagagcacccagcccaggagccttccagcgc
tccatggactctaggatgtcacccaaaggaccgttcatgtcacccatgaagatgcctaaa
cctggcatgaccatgatgggctcacagggacactttcctcccaacctgaggcgggacctc
aactacccaccaggatcggtggaggccaccatgccgattctcaagcccagacgcaagctc
acctccaaggacactggaacgcctgaggcctggcgcgtgatgatgtctctgaagtctggc
ctgctggcagaaagcacatgggccctagacaccatcaatatcctgctgtacgatgacagc
actgtgggctcctttaccctctcgcagttgccaggattcctcgagctgattgtggagtac
tttcgccgttacctgattgagatctttggcatcctggaagagtttgaggtggggaccgtg
gcccagaaaagccttttggaccccgctgctgaacagaaggaagaagtcatccctgaccag
gagacggactctaacgcccatcctgaacccgagtcagctccggcagaagaggcgcaggcg
gagcaagcaggaggcatcgtggaggaagctcaaccgatcagtactgcagagccagagtca
gctgaggtgagcagtgagaaggaggagtctgagatcaatataacgaaggaggacacaaat
gacgaggaccgagagaaagagggagaagaaaaagagagtgaaaaaggagcagagaacaaa
agggagtgcgtggaccagcctgttgcagagctcaaaccgaaactcaagcaagccagtaaa
tatgataagctccccatcaagattgtccacaaagaggacctgtttgaagacatgacagag
cgcttaggttacgtcaccgagttcactagcgggttgctacactggcaggctggcggaggt
gactccaccgcacacattcaaacacaatttgaaccccggagtgaaccgcctcccagggca
gagggaaagaccgggagagaaaacaaagaggaaaacaccatggacgatgggaagaaacaa
cacatcactgctactatagatgatgttctgtgtgctcgggttgacgccctttcttacgcc
caccccgcgcgctccttgccatcctaccccttcagggtgcatccggatggggagccggac
cacatcaccttgctggaggatgagcctcgctgcctggacgagcctccgctctccgcatcc
tccgcctggcaggactcactggccaagcgctgcctctgcgtctccaacatcgtccggagc
ctgtcgtttatccccgggaatgacttggatatgtcccgccaccccgctctggttcttctc
ctgggccggctgctcctgctgcaccaccagcacccggagaggaaccgatcgccccccagc
taccagagagacgagcagaaggagcaggggctgtcgagcagcaaagaggagtggtggtgg
gagtgtctgagtctgctcagggagaacgccatggtcagtctgtccaacatctcgggtcag
ctggatctctccacctatccagacaccatctgcctccccatcttggatggcctcctccac
tggatggtgtgcccttcggctgaagcccaggaccccttcccgtcagcagcaccccactcc
cagccgactccccagaggctggtgctggagtgcctctgcaagctgagcatccaggccggc
aacgttgacctcctgctagctacgccgcctttcagccgacaggagaagctcttcaccatc
ttggtccgctacgcgagtcagaggaaggcgcaggtgtacagagagatggcagtggctgtg
ctctcccacctggcacaaggagatcccacagcggcgcgcgccatagccatgcagaagggc
agcgtgggtaatttggtgggcttcttggatgatggcgttagcatggcacagtaccagcag
aaccctcacagcttgctgcacatggggcaccccccgatggacccacctagcataaacatg
atgtgcagagcagctaaaggcctgttggctatggctaaagtggaggagaacaagagagag
tttgcgttgtacgaaagcagattattagacatctccatttcctctgtgctcaacgcgggg
gtggtggctcttgtttgccaagttctctttcacctagggaaattatga
DBGET
integrated database retrieval system