KEGG   Clinocottus analis (woolly sculpin): 137787502
Entry
137787502         CDS       T10471                                 
Symbol
arid1b
Name
(RefSeq) AT-rich interactive domain-containing protein 1B
  KO
K11653  AT-rich interactive domain-containing protein 1
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:cana00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    137787502 (arid1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cana03000]
    137787502 (arid1b)
   03021 Transcription machinery [BR:cana03021]
    137787502 (arid1b)
   03036 Chromosome and associated proteins [BR:cana03036]
    137787502 (arid1b)
Transcription factors [BR:cana03000]
 Eukaryotic type
  Helix-turn-helix
   ARID
    137787502 (arid1b)
Transcription machinery [BR:cana03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     137787502 (arid1b)
Chromosome and associated proteins [BR:cana03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    137787502 (arid1b)
SSDB
Motif
Pfam: BAF250_C ARID
Other DBs
NCBI-GeneID: 137787502
NCBI-ProteinID: XP_068436126
LinkDB
Position
Unknown
AA seq 2275 aa
MAAQVASAPTRTNNKNKKLSSGLGPDLNSGKSGGGGTVQRTGPMLGAGDGTLNNVDHHRR
NELNMVHSTSTTHNASDGHDKDGNNLTSATASTNSTTSSMEAGLIANHKLKCVGSGDPTQ
SQPPPQQQPPPQFGQFAPHQQRQIQSNNTANNNGQGPRGDRAMDHQHHGGKENLLGGQGE
PQQQHMPGKGEGDLTCKPAERMMGTRYEHSNLGPTSNNSEFNNNYYTSRPCYEQHGGQQQ
QSSGMGITHSSAHNSMENSHEAGYHNSQYNQYPAYRAGYGGGAYGMMGPSGCRQPGNMMM
GSNSSASHGKSPLAAASGGFQRFPGQSQQQHPSGATPTLNQLLTSPSPMMRGYGGAYQDY
SGSTAQQQAGMGLGKDAGQQYGGNSAHGWGGQQRNHPHAMSPGNGGQGLGRTQVSSMDFM
AMKRSQLYSMANNPYSTPQQPGGGPYPASQPYTSPPPHRYPMSMQGRGQMGMGGMQYPQQ
QQVAPYGQQGMGGYSQQQQQQQQQQQQQQQAGQQGTPPYFSPPQQTPPGQTQSPYLQPRP
PPQQEAQQETYVTRGPAPGNSGKANNEDGVSQDRPSSLPDLSGSIDDLPTGTEAGLGSAV
SVGGSSSSSSSSSQGEQGGASNQGQSPFSPHASPHLPSQRSGPSPSPVGSPAGSTQSQQS
RSGSGPISPASGPPANTTAPGSAMAPQISGNGPEGSHPPITRSPMAQEKGFMSNMQRNQG
SSQFASPQSGPPMSPHPSPGGPLYSVVGPYSQSGTTGPYGPQGSQYGHQGNYPRPSNYGG
GPASTSYSGPGPGMTNSLGMNASSPMHGQGPGQPIPVGRSHGPGSQNRVYPPMAPSSPGM
PQPAGPGMGPPSLGNSNRKAQEAAAAAMPGSANSTHNRQGSYQGPGINQASTIATTVPNS
QPTGNNNSAMGNAQGPAYNMPPSGAMGLSGDGMMSPDGKSKTDVKDDSGPANEPHKPKLQ
DGYSNNNSSSSSSQQCVSQPATPGSALPVPSPLSPSPASLSSYHGDDSDSISSPPWPIKT
PSSPKANPNSSSLSGERITRLFELGVEPERRGWVERYLTFMEERGTPVTQLPAVGKKPLD
LWKLYIAVREIGGLAMVNKNKKWRELSTTLNVGTSSTSASSLKKQYIQYLFAYECKMERG
EEPPADSSSSGSSSVAGGDSRKQVKIQPPSPANSGGSLQGPQTPLSSGSSSTAEAVGDLK
PPTPATTPLGQVTPLPPNRSSVSIQDPFSEVSDPAFQKRAASLPASAPYQQGLSMPDMMM
RMQYDAKDPFAGMRKMAGADPYIPGQMPGGGMQDMYGRPPSALSMSQRSQYPYGPGYDRR
PDHVMGMEGNMGPPGSQNNMGPSNSEGSMYSSSRYPSQQRHDGYSQQYPSMPYGMHPSGM
YPQQQQGYKRPMDGMYGPPPKRHESDMYAMQYANQQPDMYNHYGGGYSGPEHRPIQGQFP
YPYPRDRMGPSGQSQHSMMGGGPTPNHAADGPNVWPSRTELGYPYPNRQGPPSQMPPYGS
MGRDDMDGRPGQEQWHRQSAYMSSSGGMTPLSSRQPSSYSNSPSMANHLSRAPSPGAFQR
SMDSRMSPKGPFMSPMKMPKPGMTMMGSQGHFPPNLRRDLNYPPGSVEATMPILKPRRKL
TSKDTGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVGSFTLSQLPGFLELIVEY
FRRYLIEIFGILEEFEVGTVAQKSLLDPAAEQKEEVIPDQETDSNAHPEPESAPAEEAQA
EQAGGIVEEAQPISTAEPESAEVSSEKEESEINITKEDTNDEDREKEGEEKESEKGAENK
RECVDQPVAELKPKLKQASKYDKLPIKIVHKEDLFEDMTERLGYVTEFTSGLLHWQAGGG
DSTAHIQTQFEPRSEPPPRAEGKTGRENKEENTMDDGKKQHITATIDDVLCARVDALSYA
HPARSLPSYPFRVHPDGEPDHITLLEDEPRCLDEPPLSASSAWQDSLAKRCLCVSNIVRS
LSFIPGNDLDMSRHPALVLLLGRLLLLHHQHPERNRSPPSYQRDEQKEQGLSSSKEEWWW
ECLSLLRENAMVSLSNISGQLDLSTYPDTICLPILDGLLHWMVCPSAEAQDPFPSAAPHS
QPTPQRLVLECLCKLSIQAGNVDLLLATPPFSRQEKLFTILVRYASQRKAQVYREMAVAV
LSHLAQGDPTAARAIAMQKGSVGNLVGFLDDGVSMAQYQQNPHSLLHMGHPPMDPPSINM
MCRAAKGLLAMAKVEENKREFALYESRLLDISISSVLNAGVVALVCQVLFHLGKL
NT seq 6828 nt   +upstreamnt  +downstreamnt
atggctgcgcaagttgcatcggctccgaccagaactaataacaaaaataagaaattatcc
agcggtttgggtccggacctcaattcggggaaatcaggaggaggagggaccgtacagcgg
actggacctatgctcggtgccggagatgggactctgaataatgtagaccatcatcgccga
aacgagctcaacatggttcattcaacttccaccactcacaacgcgtcggacggccatgac
aaggatgggaataacctcacgtccgccacggcttcgactaattcaaccacttcctcgatg
gaagcgggtttgatcgcgaaccacaagctgaaatgtgtggggagcggagatcccactcag
tctcagccgccgccgcagcagcagccgccgccgcaattcggccaatttgcgccacatcag
cagcgacagatccaaagtaacaacaccgccaataacaacggccaggggccccgcggggac
cgggccatggatcaccaacaccacggcggcaaagagaacctgttgggggggcagggggag
ccgcagcagcagcacatgccaggaaaaggtgagggggacctcacctgtaaacccgcggag
aggatgatgggtaccaggtacgaacactccaacttgggcccaactagtaacaactccgag
tttaataacaactattacacttcgaggccctgttatgagcaacatggcggccagcagcaa
caaagcagtgggatggggataacgcactcctcggcacacaacagcatggagaactcccac
gaagcagggtaccacaacagccagtacaaccagtacccggcgtaccgggcgggctacggc
ggcggggcctacgggatgatgggcccctctgggtgccggcagcctgggaacatgatgatg
ggcagcaactcctcagcgagccacggcaagtctcccctggcagctgcttcgggtggcttt
cagaggttcccagggcaaagtcagcagcagcatccctcgggggccactccgaccctcaac
caactgctgacgtccccgagccccatgatgcggggctacggcggcgcgtatcaagactac
agcggctccacggcgcaacagcaggccggcatgggcctggggaaagacgcggggcaacag
tatggaggcaactctgcccacggctggggagggcagcaaagaaaccaccctcacgcaatg
agtccaggcaacggagggcaaggcctcggcaggactcaggtgtcctccatggacttcatg
gctatgaagcgctcgcagctctacagcatggccaacaatccttactccactccacagcag
ccagggggcgggccttaccctgctagccagccatacacatcacctcctccacacagatat
ccaatgagcatgcaggggaggggccaaatgggcatgggcgggatgcagtatcctcaacaa
cagcaggtggcgccatatggccagcaggggatggggggctacagccagcagcagcagcag
cagcagcagcagcagcagcagcagcagcaggcggggcagcagggaacccctccgtacttc
agcccccctcagcagacccctccaggccagacccagagcccttacctgcagcctcgaccc
ccgccacaacaggaggcccagcaggagacgtacgtcaccaggggtccggccccagggaat
tctgggaaggccaacaatgaggatggcgtctcccaggaccgcccgtccagtctgccggat
ctgtccggctcgattgatgacctccccactgggacggaggccggcctgggctcagccgtc
agcgtcggtggctcctccagtagcagcagcagcagcagccagggggagcagggaggggcc
agcaaccagggacagtcccccttctcccctcacgcctccccccacctccccagccagagg
agcggaccctctccctcccccgtgggctcacctgcaggctccactcagtcccagcagtcg
cgatccggctctggacccatctcccctgccagcggacccccagccaacaccaccgcacca
ggttctgcaatggccccacagatctctgggaatggaccagaaggatcccacccgccaatc
acccgctcacctatggctcaggagaaagggttcatgtccaacatgcagagaaaccagggt
agctctcagtttgcctctcctcagtccggacctcctatgtccccacacccctcacctggg
ggcccattgtattctgtggtgggaccctactcccagagtggcactacaggcccttacgga
cctcaaggatcccagtatggacaccaaggtaactatcctcggccatccaactacggcggc
gggcctgccagcaccagctacagtggccccggccccggcatgaccaacagtctggggatg
aatgcaagcagccccatgcacggccaggggcccggccagcccatacctgtaggtcgcagc
cacggcccgggcagccaaaacagggtgtacccgcccatggctcccagctcccccggcatg
ccccagccagctgggcccgggatgggccctccttctttgggtaattctaaccgcaaggcc
caggaggcagcagcagctgccatgccgggatctgccaactcaacacacaacaggcagggc
agctatcaaggccctggcatcaaccaggcgagcaccatagctactactgtccccaatagc
cagccaacgggaaacaacaattcagccatgggcaacgcacaaggtcccgcctacaacatg
ccgccttcaggagccatgggactgtcaggagacgggatgatgagcccggatgggaaatcg
aagacggacgtaaaagacgacagtggcccggccaacgagcctcacaaaccaaagctacag
gacggctacagcaacaataacagcagcagcagcagctcccagcagtgtgtgtcccagcca
gccacgccgggcagtgccctgcccgtgccctccccgctctcccccagcccagccagcctg
tcctcgtaccacggagacgacagcgacagcatcagcagccccccttggcccatcaagacc
ccctccagtcctaaagccaacccaaactcctcctccctcagtggggagcgaatcacgcgc
ctatttgagctgggtgtggagccggagaggcggggctgggtggagcgatacctgaccttc
atggaggaaaggggcacgcctgtgacccagcttcccgctgtgggcaagaagccgctggac
ctctggaagctctacatagctgttcgggagataggaggcctcgccatggtaaacaagaat
aagaagtggcgcgagctgtccaccaccctgaacgtgggtacatccagcacctccgccagc
tcgctcaagaagcaatacatccagtatctgtttgcctacgagtgtaagatggagagggga
gaagagccgccggcagacagcagcagcagtggcagcagcagcgtggctggaggggacagc
aggaagcaggtcaagatccagccgccctcacctgctaattcaggcggctccctccaaggc
ccacagacgcccctgtcctctggcagcagctcgacagccgaggcggtgggggacctgaag
ccccccacacccgccaccacccccctgggacaggtcacacctctgccccccaacaggagc
agcgtgagcatacaggaccccttctcggaggtgagcgacccggctttccagaagcgtgct
gcctccctgccggcctcagctccttaccagcagggcctcagcatgcctgacatgatgatg
aggatgcagtacgacgccaaggacccctttgccgggatgaggaagatggcgggagctgat
ccatacataccaggccagatgcccggtggtggcatgcaggacatgtatggtcgacccccg
tctgccttgagcatgagccaacggtcgcagtatccatatggaccgggctacgacaggaga
ccggaccatgtcatggggatggaggggaacatgggtccccctgggagtcagaacaacatg
ggaccctcgaacagtgagggcagcatgtactcttccagtagatacccttcacagcagaga
cacgatggctacagtcagcagtatcccagcatgccatatgggatgcatccatctgggatg
taccctcagcaacagcagggctacaaacggcccatggacggcatgtacggccccccaccc
aagagacacgagagcgacatgtatgccatgcagtacgccaaccagcagccggacatgtac
aaccactacggtggaggctactcaggccccgaacacagacccatccagggacagttcccc
tacccctacccccgcgaccgcatgggtccctcaggtcagagccagcacagtatgatgggt
ggggggcccactcctaaccatgccgccgatggccccaacgtgtggccatccaggacagag
ctcggctatccctaccccaaccgacaggggccgccgtcacaaatgcctccttacggctca
atgggcagagatgacatggacggacgtccggggcaggagcagtggcaccgtcagtctgcc
tacatgtcatcgtcaggaggcatgactcccctgtcctcacgccagccatcttcttattcc
aactctccatccatggccaaccacctgtccagagcacccagcccaggagccttccagcgc
tccatggactctaggatgtcacccaaaggaccgttcatgtcacccatgaagatgcctaaa
cctggcatgaccatgatgggctcacagggacactttcctcccaacctgaggcgggacctc
aactacccaccaggatcggtggaggccaccatgccgattctcaagcccagacgcaagctc
acctccaaggacactggaacgcctgaggcctggcgcgtgatgatgtctctgaagtctggc
ctgctggcagaaagcacatgggccctagacaccatcaatatcctgctgtacgatgacagc
actgtgggctcctttaccctctcgcagttgccaggattcctcgagctgattgtggagtac
tttcgccgttacctgattgagatctttggcatcctggaagagtttgaggtggggaccgtg
gcccagaaaagccttttggaccccgctgctgaacagaaggaagaagtcatccctgaccag
gagacggactctaacgcccatcctgaacccgagtcagctccggcagaagaggcgcaggcg
gagcaagcaggaggcatcgtggaggaagctcaaccgatcagtactgcagagccagagtca
gctgaggtgagcagtgagaaggaggagtctgagatcaatataacgaaggaggacacaaat
gacgaggaccgagagaaagagggagaagaaaaagagagtgaaaaaggagcagagaacaaa
agggagtgcgtggaccagcctgttgcagagctcaaaccgaaactcaagcaagccagtaaa
tatgataagctccccatcaagattgtccacaaagaggacctgtttgaagacatgacagag
cgcttaggttacgtcaccgagttcactagcgggttgctacactggcaggctggcggaggt
gactccaccgcacacattcaaacacaatttgaaccccggagtgaaccgcctcccagggca
gagggaaagaccgggagagaaaacaaagaggaaaacaccatggacgatgggaagaaacaa
cacatcactgctactatagatgatgttctgtgtgctcgggttgacgccctttcttacgcc
caccccgcgcgctccttgccatcctaccccttcagggtgcatccggatggggagccggac
cacatcaccttgctggaggatgagcctcgctgcctggacgagcctccgctctccgcatcc
tccgcctggcaggactcactggccaagcgctgcctctgcgtctccaacatcgtccggagc
ctgtcgtttatccccgggaatgacttggatatgtcccgccaccccgctctggttcttctc
ctgggccggctgctcctgctgcaccaccagcacccggagaggaaccgatcgccccccagc
taccagagagacgagcagaaggagcaggggctgtcgagcagcaaagaggagtggtggtgg
gagtgtctgagtctgctcagggagaacgccatggtcagtctgtccaacatctcgggtcag
ctggatctctccacctatccagacaccatctgcctccccatcttggatggcctcctccac
tggatggtgtgcccttcggctgaagcccaggaccccttcccgtcagcagcaccccactcc
cagccgactccccagaggctggtgctggagtgcctctgcaagctgagcatccaggccggc
aacgttgacctcctgctagctacgccgcctttcagccgacaggagaagctcttcaccatc
ttggtccgctacgcgagtcagaggaaggcgcaggtgtacagagagatggcagtggctgtg
ctctcccacctggcacaaggagatcccacagcggcgcgcgccatagccatgcagaagggc
agcgtgggtaatttggtgggcttcttggatgatggcgttagcatggcacagtaccagcag
aaccctcacagcttgctgcacatggggcaccccccgatggacccacctagcataaacatg
atgtgcagagcagctaaaggcctgttggctatggctaaagtggaggagaacaagagagag
tttgcgttgtacgaaagcagattattagacatctccatttcctctgtgctcaacgcgggg
gtggtggctcttgtttgccaagttctctttcacctagggaaattatga

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