Clinocottus analis (woolly sculpin): 137787591
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Entry
137787591 CDS
T10471
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137787591 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137787591 (nup98)
03036 Chromosome and associated proteins [BR:
cana03036
]
137787591 (nup98)
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137787591 (nup98)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
137787591 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
137787591
NCBI-ProteinID:
XP_068436298
LinkDB
All DBs
Position
Unknown
AA seq
1834 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTSSTFGQPRPADTAFGAAGGFGTSAFGATANTGGLFGPAQNK
PGGLFGPSTFTQQPAATATNTGFGFGGTTGTTTSLFGNTGTGASGGLFSQPSNAFGANKP
TTFGKVSLPSCPPGFGTTATSGGLFGSTNTAASNPFGGGGVASLFGGAGFTAAQQPGTTV
KFNPPTGTDTMVKAGVTTSINTKHQCITAMKEYENKSLEELRLEDYQASRKGPTNPMAAP
TGGLFGATAAPTSAATGLFGPAAPSTNFSFGQNKTTFGAAPAAGGFGATAGGLFGQTAAQ
PASSLFKPFGQTTTTPSAGFSFGSTNTMGQANTSTMGLFGNTATPQAGGLFGAAQPSTAA
GFGAATGLFGQTNPGFGSVGTQQSLFGNKAAGFATTTTSAPSFGTGLFGNKPALTLGAGA
NASTFGFGANPAAGSLFGNKPAAGGLGTALGTSFGAAVGTGQTSLFGSNQSKLGATLGTM
GTFGATAFNTGASTLGFGAPQQPIALTDPSGTASQHALLQQQLSVLAYSPYGDSPLFRNP
LTDPKKKEERLKPTNPTAQKALTTPTHYKLTPRPATRVRPKALSSGASKSQLFDGLDDDE
PSLTNGAFVPRKNIKKLVLKNLNSSQYNSPINTETDDLASPPEYPQNGHSHMEDEEEAMP
GPSRPDDDPEVSQFYVNPIAKPVPLGRLQPSLQDTISDLNMHKLARNGGLELSSEDAMAS
PGDESLQVDREEEEEELQEIQQAPHPAGIVLNRVGYYTIPSLDDLAEMVDDNGVCVVDNF
TVGRKGYGSIFFPGEVNVSALNVDEIVHFRRKEVIVYPDDKNKPAEGEGLNRRAEVTLDG
VWPNDKTACTQIRSPERLAEMNYEGRLEKASRKQGARFLEYRAETGSWVFEVAHFSKYGL
KDSDEEEDVPLEADPKKLKALSPPAGQQLTASQQQVAPQAQSLVAVELPGGVAGLDSDMA
DITQSFPTESMLGDDDLPTGTPDWTGGKLGGLMPEEHDGVSVSGHMASSLGINPHTLQIM
KASLFAEDDDEEESDMIQDQRAMKVDVSSPRVVVPGAQSRPSVGGLLQARFTSGLFSQLS
DAPRPPPLPPLARGSPARSGPASFLLPARTPEPSVRTVGVRRLGGPVALEESVTHGKGAL
LMDAGLFAGRSFRVGWGPGWTLAHCGRPLSALPAKRPDRHELTKTDFSFLPKPARSKPLI
ESPYKVVLEQLVGLEPAEEEEEEEEEEQSVLQRPLEICLKHCTVETSDASDCPLVRPQPG
VAALHEYTEWILELSDRQGDAHPLLGSWSEVWTLCEALWGRLGPAGPEPDAEPLDAYEQQ
LERRRSFSAWLSRGAARRVEEEVALAAKGCHADAVFSYLTGNRVSEACQLAQKQGDHRLA
LLLSQAAGSQYCRDLLALQLADWNRMQTDSYLPEERLRIFTLLSGKPVWQSSDSVVNVCA
ELDWKRCVAVHLWYMLPPTASVADALARYEAAFQGSCEGGRYACAPLPAYLEAEPPDMME
EEEEEEAEAEPKRPLHDLCFHLLKLYSDRHYSLQQLLDPLAVTWRRLDYRLSWHLWAVLQ
ALHYGHLSAARQGLLHAGYAALLESRGLWHMAVFILLHIPDHTQRERAVRAMLTLHCRLQ
ETDESLRRERFLTERLLVPARWLHEAKATRARRDGDRHQEALHLYRAGSWSRCHRLLIQH
LASDCIINDNHDYLLEFLEGLEVPERSAAVQDWDTAGRVYLDYIRVIKTLQDIQQEETSG
YELERLYGDVTSLCSRVELLPCGSARDRLAQSEMAKRVANILRVVLRLQQGDALGAPLAL
LAPHVSRLPMPEDYTLEELRGLTQAYLRQLIVSQ
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcattcggtactcccttcggcggggggacgggcgggttcggcacctcg
tcgaccttcggacaaccaagacctgcagacacggcctttggggccgcaggaggcttcggg
acgtcggcgttcggggccaccgccaacaccggagggctgttcggtcccgcgcagaataaa
cctggcggtctgttcgggcccagcacgttcacccagcagccggcggcgaccgccaccaac
accggctttggcttcggcgggaccaccggcaccacgaccagcttgtttgggaacaccggg
acgggcgccagcggcggcctcttctcccagcccagcaatgcgttcggagccaacaagccc
accacgtttggaaaagtctccctcccatcgtgtcctccaggctttgggacgaccgccacc
agcggcgggctgtttggctccaccaacaccgccgcctccaacccgttcggtggaggcggc
gtcgcctccctgtttggcggcgcggggttcaccgccgcgcagcagccgggaaccaccgtc
aaattcaaccctccaacaggaacggacacgatggtgaaagccggcgtgacgacgagcatc
aacaccaagcaccagtgcatcacggccatgaaggagtacgagaacaagtctctggaggag
ttgaggctggaggactaccaggccagcaggaagggcccgaccaacccgatggcggctccg
accggcggtctgttcggcgccaccgcggctccgaccagcgccgccaccggcctgttcggc
cccgcggcgcccagcaccaacttctccttcgggcaaaacaagaccacctttggagcagcg
ccggctgccggcggtttcggcgcgacggccggcggcctgttcggccagacggccgctcaa
ccggccagcagcctgttcaagcccttcggccagaccaccaccacgccgagcgccggcttc
tccttcggcagcaccaacaccatggggcaggccaacaccagcaccatgggtctgttcggc
aacacggcgacgcctcaggccggcggtctgttcggcgcggcgcagcccagcaccgccgcc
ggcttcggcgcggccaccggactgttcggacaaaccaaccccggattcgggagcgtcggc
acgcagcagagtctgttcggcaacaaggcggccggcttcgccaccaccaccaccagcgcg
ccgtccttcggcaccgggctcttcggcaacaagcccgccctcacgctcggcgccggagcc
aacgcctccaccttcggtttcggcgctaacccggccgccgggagtctgtttggcaacaag
ccggccgccggcggcctcggcacggcactgggaaccagcttcggagcagcagtgggaacg
ggacagacgtctctgtttgggagcaaccagagcaaactgggcgccacgctgggaacgatg
ggaaccttcggagcgaccgcgttcaacacgggagccagcaccctcggctttggagctcca
cagcagccaatcgcgctcacagaccccagtgggacggcctcccagcatgctttgctgcag
cagcagctcagcgtgttggcgtactcgccgtacggagactctcctctgttcaggaacccg
ctgacggaccccaagaagaaggaggagcgtctgaaaccgaccaatccgacggcccagaag
gctctgaccacgcccacccactacaagctgacccctcggccggccaccagggtgcgcccc
aaggcgctgtcgtccggcgcctccaagtcgcagctgttcgacggcctggacgacgacgag
ccctcgctcaccaacggagccttcgtacccaggaagaacatcaagaagctcgtgctgaag
aacctgaacagcagtcagtacaacagtccaatcaacacggagacggacgacctcgcttcc
cctccagagtacccgcagaacggccacagccacatggaggacgaggaggaggcgatgccg
ggtcccagccggccggacgacgaccccgaggtctcccagttctacgtcaaccccatcgcg
aagcccgtcccgctgggccgcctgcagcccagcctgcaggacaccatcagcgacctcaac
atgcacaaactggcccgcaacggcggcctggagctgagcagcgaggacgccatggcgtct
ccgggggacgagtctctgcaggtggaccgagaggaagaggaggaggagctgcaggagatc
cagcaggctcctcacccggcgggcatcgttctgaaccgcgtgggttactacaccatcccc
tccctggacgacctcgccgagatggtggacgataacggcgtgtgcgtggtggacaacttc
accgtcggcaggaaaggctacggctccatcttctttcccggcgaggtgaacgtgtcggcg
ctgaacgtcgacgagatcgtgcacttcaggcgcaaagaggtcatcgtgtacccggacgac
aaaaacaagcccgcggagggggaggggctcaaccggcgggccgaggtgacgctggacggc
gtctggcccaacgacaagacggcctgcacgcagatccggagccccgagcggctcgcggag
atgaactacgagggccggctggagaaggcctcacgcaagcagggcgctcgcttcctggag
taccgagcggagaccggctcctgggtgttcgaggtggctcatttctctaagtacggcctg
aaggactcagacgaggaggaggacgttcctctggaggccgaccccaagaagctgaaggcc
ttgtctcctcccgccggtcagcagctgacggcctcccagcagcaggtggcgccacaggct
cagtctcttgttgccgtggagcttccgggcggcgtggccgggctggacagcgacatggcc
gacatcacccagagcttcccgacagagagcatgctgggagacgacgacctgccgacgggg
accccggactggaccggcgggaagctcgggggcctgatgcccgaggagcacgacggcgtc
tccgtgtccggacacatggcgtcctcgctgggcatcaacccgcacacgctgcagatcatg
aaggcgtctctgttcgctgaggatgacgatgaggaggagagcgacatgatccaggatcag
cgagcgatgaaggtcgacgtctcgtctcctcgcgtcgtcgtgccgggagctcagagccga
ccctccgtgggcgggctccttcaggctcgcttcacctccggcctcttctcccagctgtcg
gacgctcctcgtcctcctcctcttcctcctctggctcgcggctccccggcccgctcaggc
cccgcctccttcctgctgccggcccgaacgccggagccctcggtgcggacggtcggcgtg
cggcggctcggcggcccggtggccctcgaggagtcggtcacgcacgggaagggcgcgctg
ctgatggacgccgggctgttcgcgggccggtccttccgggtcggttggggtcccggctgg
acgctggctcactgcggccggccgctcagcgcgctgccggccaaacggcccgaccgccac
gaactcaccaagacggacttcagcttcctgccgaagcccgcgaggagcaaaccgctgatc
gagagcccctacaaggtggtgctggagcagctggtgggtctggagcccgcagaggaagag
gaggaggaggaggaagaggagcagtcggtgctgcagcgccccctggagatctgcctgaag
cactgcaccgtggagaccagcgacgcctccgactgcccgctggtgcgcccgcagcccggc
gtggcggcgctgcacgagtacacggagtggatcctggagctgagcgaccggcagggcgac
gcccaccccctcctgggctcctggtccgaggtctggactctgtgtgaggccctgtggggc
cggctgggcccggccggcccggagcccgacgccgagccgctcgacgcctacgagcagcag
ctggagaggaggcggagcttctcggcctggctctcccgcggcgccgcccgccgggtggag
gaggaggtggcgctggcggcgaagggttgccacgccgacgccgtgttcagctacctgacg
gggaaccgcgtcagcgaggcgtgtcagctggcgcagaagcaaggagaccaccgcctcgcc
ctgctgctgtcgcaggccgccggctcgcagtactgccgcgacctgctggccctgcagctc
gccgactggaaccgcatgcagaccgacagctacctgcccgaggagcggctccgcatcttc
acgctgctgtccgggaagcccgtgtggcagtcgtctgactccgtggtgaacgtctgcgcc
gagctggactggaagcgctgcgtggccgtgcacctgtggtacatgctgccgcccacggcc
tcggtggccgacgccctcgccagatacgaagccgccttccagggctcatgcgaggggggc
aggtacgcctgcgccccgctgcctgcgtacctggaggcggagcctccggacatgatggag
gaggaggaggaggaggaggcggaggcggagcctaaacgaccgctgcacgacctctgcttc
cacctgctcaaactctacagcgacagacactacagcctgcagcagctgctggacccgctg
gccgtcacctggcgccggctggactaccggctcagctggcacctgtgggccgtcctgcag
gcgctgcactacggacacctgagcgcggcgcggcagggcctgctgcacgccggctacgcc
gcgctgctggagagccgcgggctgtggcacatggccgtgttcatcctgctgcacatcccc
gaccacactcagcgggagcgggcggtgcgggcgatgttaacccttcactgccgcctgcag
gagacggacgagtctctgcggcgcgagcgcttcctgacggagcggctgctggttccggcc
cgctggctccacgaggccaaagccacgcgggcgcgccgcgacggagaccgccaccaggag
gcgctgcacctgtaccgggccggcagctggagccgctgccaccggctgctcatccagcac
ctggcctcagattgcatcatcaacgacaaccacgactacctgctggagttcctggagggg
ctggaggtccctgaacgcagcgccgccgtccaggactgggacacggcgggccgggtctac
ctggactacatccgggtcatcaagacgctgcaggacatccagcaggaggagacttcgggc
tacgagctggagcgtctctatggcgacgtgacgtctctgtgcagccgggtggagctgctg
ccctgcggctccgcccgggaccggctcgcccaatcagagatggcgaagcgcgtggccaac
atcctgcgcgtggtgctgcgcctccagcagggcgacgcgctcggcgctccgctggcgctg
ctggcgccgcacgtcagccggctgccgatgccggaggactacacgctggaggagctgcgc
ggcctcacgcaggcctacctgcgccagctcatcgtcagccaatga
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