KEGG   Clinocottus analis (woolly sculpin): 137787598
Entry
137787598         CDS       T10471                                 
Name
(RefSeq) afadin
  KO
K05702  afadin
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana04517  IgSF CAM signaling
cana04520  Adherens junction
cana04530  Tight junction
Brite
KEGG Orthology (KO) [BR:cana00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    137787598
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    137787598
   04530 Tight junction
    137787598
SSDB
Motif
Pfam: DIL PDZ RA PDZ_2 PDZ_6 RA_2 RA_3
Other DBs
NCBI-GeneID: 137787598
NCBI-ProteinID: XP_068436318
LinkDB
Position
Unknown
AA seq 1235 aa
MPEGEERAKLAEVIRQWNDNRLDLFEISQPDENLEFHGVQRFYFEDRSGGNVATKCLRVC
SKSSAHEVIESLAEKFRPDMKMLTSSYSLFEMHGNEERKLDLDDRPLLVQLNWNTDNREG
RFVLKKDTQRLETTLPEREKGGLIQSFKRTLSRKEKSKNKARATDKISDDEKKGSTEKRL
NNNSVCVSDREDEKSRTGNKKLQRPAAAGGKHAEDLYPDFSDQPGLPIGIKFCDSSEEAF
LSAVMNYTNSSTVHFKLSPAYVLYAAGRFALQRHYRRGSPLCEHGVTLAASKMAAMTSKV
IQRQQAIAGALAFWMANSSELLNFLKHDKDLSPLTRQSQLDLSHLVHKAYSCLLQCLQNE
LRKHLPTFLIDPELHGKLPAGIEMVLNTLMNTMSLLRRCRVNPALTIQLFSQLFHFISIW
LFNQLMSPRADAPGLRSHYWGAALRQRLTAIEAWAERQGLELAADCHLGHIVQATTLLTM
NKYSMQDVKAVQNTCFKLNSLQLQTLLSGYLYATNEPHITPDLIDAVVTAAQASADNLIR
SEGRDIQLEESLDLHLPFLLPEGGYSCDTVRGIPPGFREFLEPICRKGLCFLTSQPNSKG
DWTVFFSEPTSSAESTCLVTHREPDIVTITLNKPLNSGMGVSIVAAKGAGQENLGIYIKS
IVRGGPAEMNGRLAAGDQLLSVDGQSVVDLSQERAAAIMMQTGPVVTLQVAKFGASYHGL
EALLSEQSEKTTGETSHTKPNGTALMLYRVVDPGPSERLHGGNKRSKDQAMQRNRQLYRS
NPDMNTGFSPEDDDEPADLGVRANNMAAASSVNLCADTGHREYLTLPTPKSQDKNTSESS
RLQQPLKVSLRPLEGQYSTKRTFMRQALSQEDLCVDSGGPLLDKRQNLWDQNERRAKQTS
SHYSSFPIRSSVSTHDILSDYCCPANQQQDGRASGAGVWRTPFSQHPTPTPSNQPVRIDI
PVTRATNAHAGPPPPSLVTFQGSSLLAARTSQTLNVRGHRNRADPVYACPMTATRKRPQA
SLPQQQQRPTTRREQAAKPQVSITPTKHVSFLEPPAKPKDPQERSDPWRREAQEQLEKQQ
RLRVVELLEQEVLELQGKARRSAEENGRLRRISLEWQFQKRLQEVQRRGEDEEGDEEEEE
DLDMMVTIQQMERRAQGKPHEGNKSSAENVNAELKESEKQEETKAKPDHRPSGRSQGFHN
MSPTENQEKKTRTPSAPEKLTFKERQRLFSLASSA
NT seq 3708 nt   +upstreamnt  +downstreamnt
atgccggagggggaagaacgggcgaaattagccgaagtcatcagacagtggaacgacaac
agactggacttgtttgaaataagtcaacctgatgagaacttggagtttcatggagtgcag
cgcttctactttgaggatcgcagcggaggaaatgtggccactaagtgcctgcgcgtctgc
agcaagtcttcagctcacgaggtgattgaatctctggcagagaagttcaggcccgacatg
aagatgctgacgagcagttactccctgtttgagatgcacggcaatgaagaacgtaaactg
gatctggacgacagacctttgctcgtgcaattaaactggaacacagacaacagagaagga
cgctttgtgctgaagaaagacacgcagcgtttggagaccacccttcccgagagggaaaag
ggaggcctgatccagagcttcaagaggacgctgtcaagaaaagagaaaagcaaaaacaaa
gccagagcgactgacaagatttcagatgatgagaaaaaagggtcaaccgagaagcgactg
aacaacaacagcgtctgtgtgtccgaccgcgaggacgaaaagagccgcacaggaaacaaa
aagctgcagaggccggctgccgcgggaggaaagcacgccgaagatctctatccagatttt
tcagatcaacccggattaccaattggaattaaattctgtgatagctcggaggaagccttc
ctatctgcggtcatgaattacaccaacagctccaccgttcatttcaagctctcgcccgct
tacgtcctctacgccgcgggacgcttcgctctgcagcgccattaccggcgcggctcgccc
ctctgcgagcacggcgttactttggctgcgagcaagatggcggccatgacgtcaaaggtc
atccagaggcagcaggccatcgccggggctctcgccttctggatggccaactcctccgag
ttgctgaacttcctcaagcacgacaaagacctcagcccgctcacacggcaaagtcagctg
gatctgtcccacctggtgcacaaagcgtacagttgtctgctacagtgtctgcagaatgag
ttaaggaagcacttgccaacttttttgattgaccctgagctacatggcaaactgccagct
ggtatagagatggtgctgaacaccttgatgaacaccatgtccctgttgcgccgctgtcgg
gtgaacccggcgctcaccatccagctcttctcccagctcttccatttcatcagcatctgg
ctcttcaaccagctcatgagcccgcgggccgacgccccgggcctgcgctcccactactgg
ggcgccgccctccgccagcggctcacggccatcgaggcctgggcggagcggcagggcctg
gagctggcggccgactgccacctcgggcacatcgtccaggcaaccacgctcctgactatg
aacaagtactcgatgcaagacgtgaaggccgtccagaatacctgtttcaagttgaactcc
ctgcagctgcagacgctgctctccggctacctctatgcaacaaatgaacctcacattacg
cccgatttgatcgatgctgtggtgacggccgcgcaggcctcggcagataacctgattcgg
agcgaaggacgggacatccagctggaagagagccttgacctccatctgcccttcctgctg
ccggagggaggatactcctgcgacaccgtcagagggatcccgccggggtttagggaattt
ttggagccgatttgccgtaaaggtctctgctttctaacgtcccagccaaactctaaaggt
gactggaccgtgttcttcagtgaaccaacttcctctgcagagagcacatgtttggtaaca
cacagagagccggacattgtgactatcacactgaacaaacctctgaacagcgggatgggg
gtcagcattgtggctgcaaagggagcagggcaagaaaacctcgggatttacatcaaatcc
attgtcaggggaggaccagccgagatgaatggccggttagcagctggggaccagctgctg
agtgtggacggtcaaagtgtggtcgacctcagccaggaaagggcagcggcgatcatgatg
caaaccggccccgtcgtgaccttacaggttgcaaagttcggagcgagctaccacggcctg
gaggctctgctgagcgaacaatcagagaagacaacaggcgagacaagccacaccaagcca
aacggtacggcgctcatgctgtacagggtcgtggatcctggtccctctgaacggctccac
ggaggcaacaaaaggtcgaaggaccaggcgatgcagagaaacagacaactgtatcgctcc
aaccccgacatgaacacgggtttttcccccgaggatgacgacgaacccgccgacctgggc
gtgagagcgaacaacatggccgccgcctccagcgtcaacctttgtgccgatacaggtcac
agggaatacttgacactcccaacccctaaatcccaggacaagaacacgtctgaatccagt
cgactacagcaaccattgaaagtgtctttaaggcctttagagggacagtactccactaag
aggaccttcatgcgccaagctctgtcgcaggaggacctgtgcgtggacagtggaggcccc
ctgctggacaaaaggcagaacttgtgggatcagaatgagcggcgtgcgaagcaaacctcg
agccactattcgtctttcccgattcgctcgagtgtttccactcacgacatcctctcggat
tattgttgtcctgcaaaccagcagcaggacggccgtgccagcggcgccggcgtctggagg
actccgttctcgcagcatccaacgccgacgccttccaaccagccggtacgcatcgacatc
cccgtgaccagagcgaccaacgcacacgcgggtcctcctcctccttctctcgtcaccttc
cagggttcatccctgctggcggcgaggacgagccaaacgctgaacgtgcgcggccatcga
aacagagcggatcccgtctatgcgtgtcccatgacggcgaccaggaagcggcctcaggcc
tcgctccctcaacagcagcagagaccgaccactcgcagggagcaggccgcgaaaccccag
gtgagcatcaccccgaccaaacacgtctccttcctggagccccccgcgaagcccaaagac
ccccaggagcggtccgacccgtggaggagggaggcccaggagcagctggagaagcagcag
aggctgcgcgtggtggagctgctggagcaggaggtgctggagctccagggcaaagccagg
cgctcggcggaggagaacggccggctccggaggatcagcctggagtggcagtttcagaag
aggctgcaggaggtccagcggagaggagaggatgaagagggggatgaggaggaagaggag
gatttggacatgatggtgacgatacagcagatggagagaagagcgcaggggaaaccccac
gagggtaacaagagctctgctgagaatgtcaacgctgaattgaaagagtctgaaaagcag
gaggagacgaaggcaaagccagatcacagaccgagtggacggagtcaaggctttcacaac
atgtcaccaacagaaaaccaggagaagaaaaccaggacgccgtccgctccggagaagctc
acgttcaaggagcgtcagcggctcttttctctggcgtccagcgcttaa

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