Clinocottus analis (woolly sculpin): 137787598
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Entry
137787598 CDS
T10471
Name
(RefSeq) afadin
KO
K05702
afadin
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04517
IgSF CAM signaling
cana04520
Adherens junction
cana04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137787598
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
137787598
04530 Tight junction
137787598
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Paralog
GFIT
Motif
Pfam:
DIL
PDZ
RA
PDZ_2
PDZ_6
RA_2
RA_3
Motif
Other DBs
NCBI-GeneID:
137787598
NCBI-ProteinID:
XP_068436318
LinkDB
All DBs
Position
Unknown
AA seq
1235 aa
AA seq
DB search
MPEGEERAKLAEVIRQWNDNRLDLFEISQPDENLEFHGVQRFYFEDRSGGNVATKCLRVC
SKSSAHEVIESLAEKFRPDMKMLTSSYSLFEMHGNEERKLDLDDRPLLVQLNWNTDNREG
RFVLKKDTQRLETTLPEREKGGLIQSFKRTLSRKEKSKNKARATDKISDDEKKGSTEKRL
NNNSVCVSDREDEKSRTGNKKLQRPAAAGGKHAEDLYPDFSDQPGLPIGIKFCDSSEEAF
LSAVMNYTNSSTVHFKLSPAYVLYAAGRFALQRHYRRGSPLCEHGVTLAASKMAAMTSKV
IQRQQAIAGALAFWMANSSELLNFLKHDKDLSPLTRQSQLDLSHLVHKAYSCLLQCLQNE
LRKHLPTFLIDPELHGKLPAGIEMVLNTLMNTMSLLRRCRVNPALTIQLFSQLFHFISIW
LFNQLMSPRADAPGLRSHYWGAALRQRLTAIEAWAERQGLELAADCHLGHIVQATTLLTM
NKYSMQDVKAVQNTCFKLNSLQLQTLLSGYLYATNEPHITPDLIDAVVTAAQASADNLIR
SEGRDIQLEESLDLHLPFLLPEGGYSCDTVRGIPPGFREFLEPICRKGLCFLTSQPNSKG
DWTVFFSEPTSSAESTCLVTHREPDIVTITLNKPLNSGMGVSIVAAKGAGQENLGIYIKS
IVRGGPAEMNGRLAAGDQLLSVDGQSVVDLSQERAAAIMMQTGPVVTLQVAKFGASYHGL
EALLSEQSEKTTGETSHTKPNGTALMLYRVVDPGPSERLHGGNKRSKDQAMQRNRQLYRS
NPDMNTGFSPEDDDEPADLGVRANNMAAASSVNLCADTGHREYLTLPTPKSQDKNTSESS
RLQQPLKVSLRPLEGQYSTKRTFMRQALSQEDLCVDSGGPLLDKRQNLWDQNERRAKQTS
SHYSSFPIRSSVSTHDILSDYCCPANQQQDGRASGAGVWRTPFSQHPTPTPSNQPVRIDI
PVTRATNAHAGPPPPSLVTFQGSSLLAARTSQTLNVRGHRNRADPVYACPMTATRKRPQA
SLPQQQQRPTTRREQAAKPQVSITPTKHVSFLEPPAKPKDPQERSDPWRREAQEQLEKQQ
RLRVVELLEQEVLELQGKARRSAEENGRLRRISLEWQFQKRLQEVQRRGEDEEGDEEEEE
DLDMMVTIQQMERRAQGKPHEGNKSSAENVNAELKESEKQEETKAKPDHRPSGRSQGFHN
MSPTENQEKKTRTPSAPEKLTFKERQRLFSLASSA
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgccggagggggaagaacgggcgaaattagccgaagtcatcagacagtggaacgacaac
agactggacttgtttgaaataagtcaacctgatgagaacttggagtttcatggagtgcag
cgcttctactttgaggatcgcagcggaggaaatgtggccactaagtgcctgcgcgtctgc
agcaagtcttcagctcacgaggtgattgaatctctggcagagaagttcaggcccgacatg
aagatgctgacgagcagttactccctgtttgagatgcacggcaatgaagaacgtaaactg
gatctggacgacagacctttgctcgtgcaattaaactggaacacagacaacagagaagga
cgctttgtgctgaagaaagacacgcagcgtttggagaccacccttcccgagagggaaaag
ggaggcctgatccagagcttcaagaggacgctgtcaagaaaagagaaaagcaaaaacaaa
gccagagcgactgacaagatttcagatgatgagaaaaaagggtcaaccgagaagcgactg
aacaacaacagcgtctgtgtgtccgaccgcgaggacgaaaagagccgcacaggaaacaaa
aagctgcagaggccggctgccgcgggaggaaagcacgccgaagatctctatccagatttt
tcagatcaacccggattaccaattggaattaaattctgtgatagctcggaggaagccttc
ctatctgcggtcatgaattacaccaacagctccaccgttcatttcaagctctcgcccgct
tacgtcctctacgccgcgggacgcttcgctctgcagcgccattaccggcgcggctcgccc
ctctgcgagcacggcgttactttggctgcgagcaagatggcggccatgacgtcaaaggtc
atccagaggcagcaggccatcgccggggctctcgccttctggatggccaactcctccgag
ttgctgaacttcctcaagcacgacaaagacctcagcccgctcacacggcaaagtcagctg
gatctgtcccacctggtgcacaaagcgtacagttgtctgctacagtgtctgcagaatgag
ttaaggaagcacttgccaacttttttgattgaccctgagctacatggcaaactgccagct
ggtatagagatggtgctgaacaccttgatgaacaccatgtccctgttgcgccgctgtcgg
gtgaacccggcgctcaccatccagctcttctcccagctcttccatttcatcagcatctgg
ctcttcaaccagctcatgagcccgcgggccgacgccccgggcctgcgctcccactactgg
ggcgccgccctccgccagcggctcacggccatcgaggcctgggcggagcggcagggcctg
gagctggcggccgactgccacctcgggcacatcgtccaggcaaccacgctcctgactatg
aacaagtactcgatgcaagacgtgaaggccgtccagaatacctgtttcaagttgaactcc
ctgcagctgcagacgctgctctccggctacctctatgcaacaaatgaacctcacattacg
cccgatttgatcgatgctgtggtgacggccgcgcaggcctcggcagataacctgattcgg
agcgaaggacgggacatccagctggaagagagccttgacctccatctgcccttcctgctg
ccggagggaggatactcctgcgacaccgtcagagggatcccgccggggtttagggaattt
ttggagccgatttgccgtaaaggtctctgctttctaacgtcccagccaaactctaaaggt
gactggaccgtgttcttcagtgaaccaacttcctctgcagagagcacatgtttggtaaca
cacagagagccggacattgtgactatcacactgaacaaacctctgaacagcgggatgggg
gtcagcattgtggctgcaaagggagcagggcaagaaaacctcgggatttacatcaaatcc
attgtcaggggaggaccagccgagatgaatggccggttagcagctggggaccagctgctg
agtgtggacggtcaaagtgtggtcgacctcagccaggaaagggcagcggcgatcatgatg
caaaccggccccgtcgtgaccttacaggttgcaaagttcggagcgagctaccacggcctg
gaggctctgctgagcgaacaatcagagaagacaacaggcgagacaagccacaccaagcca
aacggtacggcgctcatgctgtacagggtcgtggatcctggtccctctgaacggctccac
ggaggcaacaaaaggtcgaaggaccaggcgatgcagagaaacagacaactgtatcgctcc
aaccccgacatgaacacgggtttttcccccgaggatgacgacgaacccgccgacctgggc
gtgagagcgaacaacatggccgccgcctccagcgtcaacctttgtgccgatacaggtcac
agggaatacttgacactcccaacccctaaatcccaggacaagaacacgtctgaatccagt
cgactacagcaaccattgaaagtgtctttaaggcctttagagggacagtactccactaag
aggaccttcatgcgccaagctctgtcgcaggaggacctgtgcgtggacagtggaggcccc
ctgctggacaaaaggcagaacttgtgggatcagaatgagcggcgtgcgaagcaaacctcg
agccactattcgtctttcccgattcgctcgagtgtttccactcacgacatcctctcggat
tattgttgtcctgcaaaccagcagcaggacggccgtgccagcggcgccggcgtctggagg
actccgttctcgcagcatccaacgccgacgccttccaaccagccggtacgcatcgacatc
cccgtgaccagagcgaccaacgcacacgcgggtcctcctcctccttctctcgtcaccttc
cagggttcatccctgctggcggcgaggacgagccaaacgctgaacgtgcgcggccatcga
aacagagcggatcccgtctatgcgtgtcccatgacggcgaccaggaagcggcctcaggcc
tcgctccctcaacagcagcagagaccgaccactcgcagggagcaggccgcgaaaccccag
gtgagcatcaccccgaccaaacacgtctccttcctggagccccccgcgaagcccaaagac
ccccaggagcggtccgacccgtggaggagggaggcccaggagcagctggagaagcagcag
aggctgcgcgtggtggagctgctggagcaggaggtgctggagctccagggcaaagccagg
cgctcggcggaggagaacggccggctccggaggatcagcctggagtggcagtttcagaag
aggctgcaggaggtccagcggagaggagaggatgaagagggggatgaggaggaagaggag
gatttggacatgatggtgacgatacagcagatggagagaagagcgcaggggaaaccccac
gagggtaacaagagctctgctgagaatgtcaacgctgaattgaaagagtctgaaaagcag
gaggagacgaaggcaaagccagatcacagaccgagtggacggagtcaaggctttcacaac
atgtcaccaacagaaaaccaggagaagaaaaccaggacgccgtccgctccggagaagctc
acgttcaaggagcgtcagcggctcttttctctggcgtccagcgcttaa
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integrated database retrieval system