Clinocottus analis (woolly sculpin): 137787898
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Entry
137787898 CDS
T10471
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03013
Nucleocytoplasmic transport
cana03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137787898 (pnn)
Spliceosome [BR:
cana03041
]
Complex C
Other components
EJC/TREX
137787898 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137787898
NCBI-ProteinID:
XP_068436760
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Position
Unknown
AA seq
684 aa
AA seq
DB search
MAVVVRSLQDQLEKAKESLKNVDDNIRKLTGRDPNESRPGQIRRLGGPMAGPGGGRGRGL
NLLRRSLSDMGSSGPPAKQRDIEGALLRLAGDQRARRDSRHDSDAEDDDDVKKPALQSSV
VATSKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESHVSTEKQKRRTEIEQK
LEVKAETEKKKVETDKRELFEERRSKQTELRLLEQKVELAQLQEEWTSHNNRLVKYIRTK
TKPHLFYLPGKICSATQKLLDESTKKLNGVFEERREAFAEHLSKMESRPRRQPNRDQDGN
MAATGMDHPAKGKPAGQVVKVTGNKGDAEMEAEEDEGGQGDRKVTVKDNKGEEGKKEVLK
EVEVEVEMVQLIEEESEEKTVGEEGVQVEEDKGEMGENEASPESEEMEVEGGPGQVNRSK
GEEKETDSKQGLTDIQTKKTQDIPSSEPTATSQEASNAGHQPQLSQAAGEPAVKPSETRA
SPPTPEPQTTSTEPGQDIPISLVLEVQNIATEKQALEEKPVDETPHKLPDSQEAASIPPT
PSKQQQQQQEEEGGGRKGRKKEKQPKKGRSKSNSSSSSSGSSSSGSSSSSGSSHSSSSSS
SSSSSSSSRSRSRDGGKRKRRPSDRARDRKKGEDKSHRKRGGSGGGGKDSKGSKEKEKKR
SEEGRRSSRSDREHKDRDRKDKRR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagtagtgcggagcttgcaagaccagctcgaaaaagcgaaggaaagcctgaaa
aatgtggacgataatattcgtaaattaacgggacgtgaccctaatgaatcaagaccgggt
cagatccgtcggctcggcggccccatggcaggccccggtggaggtagaggcagaggactg
aacctgctcaggcgtagtctctcagacatgggaagcagcggcccccctgccaagcaaagg
gacatcgaaggagccctgctgaggctggcgggggaccagcgggccaggagagactcgcgt
cacgacagcgatgccgaggatgatgacgatgtcaaaaagccggcgttgcagtcgtctgta
gtagctacctccaaggagagaacacgcagagacctcattcaagatcagaccatggatgag
aggggcaaacagaggaatcggcgtatgttcggcctgctgatggggaccctgcaaaaattc
aagcaagagtctcacgtctctacagagaagcaaaagcgtcgtaccgaaatcgagcagaag
ctcgaggttaaggctgagactgagaaaaagaaggtggagactgataagagggagctgttt
gaagagaggagatccaaacagactgagctgagactgctggaacaaaaagtggaattggct
cagctgcaagaggagtggaccagccacaacaatcgtctggtgaaatacattcgtaccaag
accaagcctcatctcttctacttacctggaaaaatatgctccgccacacagaaactcctc
gatgagtccaccaagaaactaaatggcgtgtttgaggagaggcgtgaggcttttgccgaa
cacctcagcaagatggaatcccgcccccggcggcaaccaaatcgcgaccaggatggcaac
atggcagcaacagggatggaccacccggcgaagggtaagccagcaggacaggtagtcaag
gtgacaggtaacaagggggatgcagagatggaggcagaggaagatgagggggggcagggg
gatagaaaggtgacagtgaaggataacaaaggggaggaagggaagaaggaagtgttgaag
gaggtggaggttgaggtagagatggtgcagttgattgaggaggagagtgaggagaagact
gtcggagaggagggggttcaagtagaagaggacaagggggagatgggagagaatgaggcc
agtccagagtcagaagagatggaggtggagggtgggccagggcaggtgaacaggagtaag
ggtgaggagaaagagacagacagtaaacaggggcttacagacatccaaactaagaagacc
caggacatcccatcctctgaaccaaccgcaaccagccaagaagcatcaaatgccggtcac
cagccccagctcagccaagcagcaggggagccggctgtgaagccctctgagaccagggca
tcccctcctacccctgaacctcaaacgacctccactgagcctgggcaggatatccccatc
agccttgttctggaagtccagaacattgcaacagagaagcaggccctggaagagaaaccg
gtggacgaaacgccccacaaattgcctgattcccaggaggccgccagcatcccccctaca
ccctccaagcagcagcagcagcagcaggaggaggagggtgggggcaggaaagggaggaag
aaggaaaaacagccaaagaagggccgcagtaaaagcaacagctcctcttcctcctctggc
tcctcctccagcggaagctcctcatcctccggatccagccactcctcttcctcctcgtcc
tcctcctcctcatcgtccagcagccgtagtcgcagtcgagacggtggcaagcgcaagagg
aggccatctgacagggccagggaccggaagaaaggagaagacaaaagtcaccgcaagaga
ggagggagcggcggtggagggaaagactcaaaggggtctaaggagaaggaaaagaagagg
agcgaggaaggaaggaggtcgtcccgcagcgatagggagcataaagatagagacaggaag
gacaagagacgctga
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