Clinocottus analis (woolly sculpin): 137788159
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Entry
137788159 CDS
T10471
Symbol
si:ch211-114c17.1
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
cana Clinocottus analis (woolly sculpin)
Brite
Spliceosome [BR:
cana03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
137788159 (si:ch211-114c17.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_16
TPR_12
TPR_11
TPR_MalT
FIMAH
HrpB1_HrpK
GAT
SACK1
Motif
Other DBs
NCBI-GeneID:
137788159
NCBI-ProteinID:
XP_068437110
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MAAEGCEEMSGNGELEESSAMEASEVAASPPAAMAEMSEENGSPAVAPEAPAGPNPVTFS
MPPPAEDEEGEFPADFERLWKTAHDTPQDFTGWTDLLQYCEQESHITASRRALEAFLTRY
PLCYGYWKKFADLERRAGYNNKAEEVCTRGLQAIPLSVDLWIHYINLLLGTLDMNLPDSP
TRIRSVFEDAVVAAGLDFHSDRLWDLYVEWEKEQGNMKKAAAVLDRVLKVPTQLYNSHYD
KFKEHLNSQEPKDVLSSEEYEELRTLCRQSQKAERAEQAQEEEEERPPGEEEPATPEGTD
TEELMQKMREQVLVRRDKVYQDNEGEVRKRWHFEDSIKRPYFHVKPLDRLQLRAWHSYLD
WEIAQLNKDTKDPQDPQDPQVAQQDPEQAATAESEVTAQPRRESEDAEVAHDDHRVRILF
ERCLIACALYEEFWIRYNQYLESQNMDEARAIFKRACEIHLAFKPNIHMQWAMFEERHGD
LTEARRVLETLEKTLPGLAVVRLRRAALERRAGQLDLSEALLREAVDESKEKPTLHAFYS
IKLARLLLKLSRSPSRARRVLQEALEISPDNDKLHLNLLELEVSGDPSAEAVQECVTRAL
AAPLAPHTKILFSQRRLQFAEDYSNSIQSVLSVYEEHQKLLKELGGTKRGAENGDDDLEK
LSKSDDGSAVAVSAQDPPTMPHVPITTPPPPVMGADASSQANYGGYGSWYQQPQYGSYGS
YGYQNTWNYNQGYYPPS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaaggctgtgaggagatgagcggcaacggggagctcgaggagtcttcagcc
atggaggcctctgaggttgctgcatcgcctccggctgcaatggcggagatgtccgaagag
aacggcagtcccgccgtggcccctgaggcccctgccggccccaatcctgttaccttctca
atgcccccacctgcagaagatgaggagggagagttccccgcagactttgagcgcctgtgg
aagactgcccacgacactcctcaagacttcaccggttggactgacctactacagtactgc
gagcaagagagtcacatcacagcgtcacgcagagcactggaggctttccttactcggtat
ccgctctgctacggctactggaagaaatttgctgatctagaacgccgtgcggggtacaac
aacaaagcagaggaggtgtgtactcggggtctccaggcaatccctctgagtgtagatttg
tggatccactacatcaatctgctgctgggaacactggacatgaacctgcccgattcgccc
acgcggattcgcagtgtgtttgaggatgcggtggtggcagcaggtctggacttccactca
gacaggctttgggatctttatgtcgagtgggaaaaggagcagggaaacatgaagaaagca
gcagccgtcctggaccgagtcctgaaagtccccacccagctctataactctcactacgac
aagttcaaagagcacctgaacagccaggaacctaaagatgtgctttcctcggaggaatat
gaggagctgaggacgttgtgccgtcagagtcagaaggcagagcgtgccgaacaagcccag
gaggaggaggaggagaggccgccaggggaggaagagcccgccacacccgagggcacagac
acagaggaattgatgcagaagatgagggaacaagtgctggttcgcagggacaaagtgtac
caggacaacgagggagaggtccgcaagagatggcactttgaagactctatcaaacgtcct
tacttccacgtcaagccactggatcgcctccagctgcgggcctggcactcgtacctagac
tgggagatcgctcagctgaacaaggacaccaaagacccgcaagacccacaagacccacaa
gtcgctcaacaagatccagagcaggcagccacagccgagtcggaggtcacagcccagcct
cggcgggaatctgaggatgctgaggttgcccatgacgaccacagggttcgcatcctcttc
gagcgttgtctgatcgcctgcgctctgtatgaggagttctggatcaggtacaatcagtac
ctggagtcgcagaatatggatgaggcacgggccattttcaaacgagcctgtgagatccac
ttggcgttcaaacccaacatccacatgcagtgggcgatgttcgaggagaggcacggtgac
ttaactgaggcccgacgagtgctggagactctggagaaaacgctaccagggttggcggtg
gtccgtcttcgcagggcagctttagagaggcgagcaggccagctggacctatcggaggcc
ttgctgcgtgaggcggtggatgaatccaaagagaagcccacgttacacgctttttattcc
atcaagctggctcgtttgcttctgaagctgagcaggagccccagcagagcccgcagagtt
ttacaggaagcgctggagataagtccggataacgataagctgcacctgaacctgttggag
ctggaggtgtcaggggacccctcagcggaggcggtgcaggagtgtgttactcgagccctg
gcagctcccctcgccccgcacaccaagatcctcttctcccagagacgcctgcagtttgcg
gaggactacagcaactctatccagagtgtgctgtctgtctatgaggagcaccagaagctg
ctgaaggagctcggtggaacgaagaggggagcagagaacggggatgacgacttagagaag
ctaagcaaaagtgacgacggctcagctgttgccgtgtctgcacaagacccacctaccatg
ccgcatgtccccatcacgacaccccctcctcccgtgatgggggccgacgccagctcacag
gccaactacgggggatacggcagctggtaccagcaaccgcagtacggcagctacggcagc
tacggctaccaaaacacctggaactacaaccaaggctactatcctcccagctaa
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