Clinocottus analis (woolly sculpin): 137788197
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Entry
137788197 CDS
T10471
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
137788197 (wdr43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cana03009
]
137788197 (wdr43)
Ribosome biogenesis [BR:
cana03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
137788197 (wdr43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_THOC3
WD40_Prp19
WD40
Utp12
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
ANAPC4_WD40
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
DSE1_N
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
ASA1
Beta-prop_ACSF4
Beta-prop_SPT8
Beta-prop_NOL10_N
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
WD40_2
Beta-prop_SCAP
Beta-prop_Nup120_160
Paf1
NBCH_WD40
CFAP251_N
Beta-prop_IP5PC_F
Tricorn_2nd
Beta-prop_RIG_1st
Beta-prop_WDR75_2nd
BBS2_GAE
AHSA1
SGL
Motif
Other DBs
NCBI-GeneID:
137788197
NCBI-ProteinID:
XP_068437153
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MAADTGSSSLQLPCVFSPKSRQYLALCSQDGRLRIWNTDSKTLHQEYVPSAHLSATCICI
TWGPCRTVKEGPQRKKRKSVAGQAEEKADLLAMGTAAGSVLIYSTVKGALHCTLDGGHSG
GVNCVQWHPEDSLLYSGSDDTNIIEWDLQTGKARSKWKADRAAVTSLCVSPDGKLLLSAG
QIIKMWDLDTKEVYRKFTGHSTAVTTLRFATTRPPDSNGLYFLSGAAHDRLLSVWQVRED
GKDKNSVVSFTLTDEPRHVDLVASNSKEEAVRLAVVCKDGQLHLFEHFLNGPCKKPLSPS
CTVQMSDTKDSPVPIPLMAAAFKADTQTVLLGYGNHLQPVMEKVEINTAERHVCLTRDVQ
TSLSLSMETAVSKVKTPIVNAKSRMLVPGLPGHQAPVKGSVAGSEKRKKDTDSKEMSIAE
RLGEIDLSTVSNKGAPQGTASLQTDNFAVLLVQGLESSDANILNKVFQTRKEMVIKKTVA
RLPLPAVLPLVEELTKRLQGHPFTAVLMVRWLKAVLMHHTSYLASLPDLVSQLGVLYHMI
ESRVKMFHKLTKLHGKLYLLMTQVATSDSSNTVTAVNHTAKLVYEEESSEDEASGDEGLP
DGDDSNWEEEEEEVAMEEEDDLDRRTDSKANGEEDMERGNESEEE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgatactggcagctcgtcgctgcagctaccatgcgttttttcaccaaaatcc
cgacagtacctggcgttgtgttcccaggacggcagactccgcatctggaacacagatagt
aaaacacttcatcaagaatacgtgccttcagcccatttgagtgccacttgtatctgcata
acctggggaccatgccggacagtcaaggagggaccccagaggaagaagaggaaatcggtg
gcgggccaggcggaggagaaggccgacctgttggcgatgggcacggcggcgggcagtgtc
ctcatatacagtacagtgaagggagccctgcactgcaccctggatggaggccacagcgga
ggggtgaactgtgtgcagtggcaccctgaagacagtttattatacagcggttcagatgat
acaaacatcatagagtgggacctgcagacgggcaaggccagaagtaagtggaaggcggat
cgcgcggcggtaaccagtttgtgtgtgagccctgacggcaaactgctgctctcagctggt
cagatcatcaagatgtgggacttggacaccaaggaggtttacaggaagttcacgggccac
tccacagccgtgacgaccctgcgctttgccaccacgcggccccccgacagcaacggcctt
tacttcctgtccggcgccgcacacgatcgtctgctcagcgtctggcaagtacgagaggac
gggaaggacaagaactcagtggtttccttcacgctgacggatgagccgcggcacgtcgac
ctcgttgcatccaacagcaaagaagaggcggtgaggctggcagtggtgtgcaaggatggc
cagctgcatctttttgagcactttttaaacgggccctgtaagaagccgctgtcgccctcg
tgtacggtgcagatgtcggacacgaaggactcccctgtgccgatccccctgatggctgcc
gccttcaaagccgatacgcagacagtgctgctgggctacggcaaccacctgcagcctgtg
atggagaaagtagagatcaacaccgcagagagacacgtgtgtttgacccgggacgtccag
accagcttgtccctttccatggagactgccgtctccaaggtgaaaactcctattgtcaac
gccaagagcagaatgttggtcccggggcttcctggtcaccaagcgcccgtcaagggaagc
gtagcgggatcagagaagaggaaaaaagacacggactccaaagagatgtcgatagcggag
aggctcggtgaaatcgatctgtccacagtctccaacaagggggcccctcaagggacagcc
tctttacagacggacaactttgcggtgctgctggtgcagggcctggagagcagcgacgcc
aacatcctcaataaagttttccagacccgtaaagagatggtgataaagaaaacggttgct
cggttacccctccctgctgttttacccttagtggaagagctcacaaagaggctccaaggg
catcctttcacggccgttttaatggtgcggtggctcaaggccgtgctcatgcaccacacg
tcatacctggcatcgctgccagacctggtttcccagctgggagtgctttatcacatgatt
gagagccgagtgaagatgttccacaagctgacgaagctgcatgggaaactgtacctgctg
atgacacaggtggcgacaagcgacagcagcaacaccgttacagctgtgaaccacacagca
aagctggtgtatgaggaagaatcatctgaagacgaggcctccggtgatgaaggtctccca
gacggtgacgactctaactgggaggaggaagaggaggaggtagcgatggaagaagaggac
gatcttgaccgcagaacagattccaaagcaaacggagaggaagacatggagcgcgggaac
gagagcgaagaagagtga
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integrated database retrieval system