KEGG   Clinocottus analis (woolly sculpin): 137788197
Entry
137788197         CDS       T10471                                 
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cana00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    137788197 (wdr43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cana03009]
    137788197 (wdr43)
Ribosome biogenesis [BR:cana03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    137788197 (wdr43)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_THOC3 WD40_Prp19 WD40 Utp12 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 ANAPC4_WD40 WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st DSE1_N WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st ASA1 Beta-prop_ACSF4 Beta-prop_SPT8 Beta-prop_NOL10_N Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_HPS5 WD40_2 Beta-prop_SCAP Beta-prop_Nup120_160 Paf1 NBCH_WD40 CFAP251_N Beta-prop_IP5PC_F Tricorn_2nd Beta-prop_RIG_1st Beta-prop_WDR75_2nd BBS2_GAE AHSA1 SGL
Other DBs
NCBI-GeneID: 137788197
NCBI-ProteinID: XP_068437153
LinkDB
Position
Unknown
AA seq 645 aa
MAADTGSSSLQLPCVFSPKSRQYLALCSQDGRLRIWNTDSKTLHQEYVPSAHLSATCICI
TWGPCRTVKEGPQRKKRKSVAGQAEEKADLLAMGTAAGSVLIYSTVKGALHCTLDGGHSG
GVNCVQWHPEDSLLYSGSDDTNIIEWDLQTGKARSKWKADRAAVTSLCVSPDGKLLLSAG
QIIKMWDLDTKEVYRKFTGHSTAVTTLRFATTRPPDSNGLYFLSGAAHDRLLSVWQVRED
GKDKNSVVSFTLTDEPRHVDLVASNSKEEAVRLAVVCKDGQLHLFEHFLNGPCKKPLSPS
CTVQMSDTKDSPVPIPLMAAAFKADTQTVLLGYGNHLQPVMEKVEINTAERHVCLTRDVQ
TSLSLSMETAVSKVKTPIVNAKSRMLVPGLPGHQAPVKGSVAGSEKRKKDTDSKEMSIAE
RLGEIDLSTVSNKGAPQGTASLQTDNFAVLLVQGLESSDANILNKVFQTRKEMVIKKTVA
RLPLPAVLPLVEELTKRLQGHPFTAVLMVRWLKAVLMHHTSYLASLPDLVSQLGVLYHMI
ESRVKMFHKLTKLHGKLYLLMTQVATSDSSNTVTAVNHTAKLVYEEESSEDEASGDEGLP
DGDDSNWEEEEEEVAMEEEDDLDRRTDSKANGEEDMERGNESEEE
NT seq 1938 nt   +upstreamnt  +downstreamnt
atggcggccgatactggcagctcgtcgctgcagctaccatgcgttttttcaccaaaatcc
cgacagtacctggcgttgtgttcccaggacggcagactccgcatctggaacacagatagt
aaaacacttcatcaagaatacgtgccttcagcccatttgagtgccacttgtatctgcata
acctggggaccatgccggacagtcaaggagggaccccagaggaagaagaggaaatcggtg
gcgggccaggcggaggagaaggccgacctgttggcgatgggcacggcggcgggcagtgtc
ctcatatacagtacagtgaagggagccctgcactgcaccctggatggaggccacagcgga
ggggtgaactgtgtgcagtggcaccctgaagacagtttattatacagcggttcagatgat
acaaacatcatagagtgggacctgcagacgggcaaggccagaagtaagtggaaggcggat
cgcgcggcggtaaccagtttgtgtgtgagccctgacggcaaactgctgctctcagctggt
cagatcatcaagatgtgggacttggacaccaaggaggtttacaggaagttcacgggccac
tccacagccgtgacgaccctgcgctttgccaccacgcggccccccgacagcaacggcctt
tacttcctgtccggcgccgcacacgatcgtctgctcagcgtctggcaagtacgagaggac
gggaaggacaagaactcagtggtttccttcacgctgacggatgagccgcggcacgtcgac
ctcgttgcatccaacagcaaagaagaggcggtgaggctggcagtggtgtgcaaggatggc
cagctgcatctttttgagcactttttaaacgggccctgtaagaagccgctgtcgccctcg
tgtacggtgcagatgtcggacacgaaggactcccctgtgccgatccccctgatggctgcc
gccttcaaagccgatacgcagacagtgctgctgggctacggcaaccacctgcagcctgtg
atggagaaagtagagatcaacaccgcagagagacacgtgtgtttgacccgggacgtccag
accagcttgtccctttccatggagactgccgtctccaaggtgaaaactcctattgtcaac
gccaagagcagaatgttggtcccggggcttcctggtcaccaagcgcccgtcaagggaagc
gtagcgggatcagagaagaggaaaaaagacacggactccaaagagatgtcgatagcggag
aggctcggtgaaatcgatctgtccacagtctccaacaagggggcccctcaagggacagcc
tctttacagacggacaactttgcggtgctgctggtgcagggcctggagagcagcgacgcc
aacatcctcaataaagttttccagacccgtaaagagatggtgataaagaaaacggttgct
cggttacccctccctgctgttttacccttagtggaagagctcacaaagaggctccaaggg
catcctttcacggccgttttaatggtgcggtggctcaaggccgtgctcatgcaccacacg
tcatacctggcatcgctgccagacctggtttcccagctgggagtgctttatcacatgatt
gagagccgagtgaagatgttccacaagctgacgaagctgcatgggaaactgtacctgctg
atgacacaggtggcgacaagcgacagcagcaacaccgttacagctgtgaaccacacagca
aagctggtgtatgaggaagaatcatctgaagacgaggcctccggtgatgaaggtctccca
gacggtgacgactctaactgggaggaggaagaggaggaggtagcgatggaagaagaggac
gatcttgaccgcagaacagattccaaagcaaacggagaggaagacatggagcgcgggaac
gagagcgaagaagagtga

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