Clinocottus analis (woolly sculpin): 137788464
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Entry
137788464 CDS
T10471
Symbol
pan3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137788464 (pan3)
mRNA degradation factors
3'-5' decay
Pan complex
137788464 (pan3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137788464
NCBI-ProteinID:
XP_068437357
LinkDB
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Position
Unknown
AA seq
798 aa
AA seq
DB search
MNSGLPASPAPLGGAGIPNVKVKFCRYYAKDKTCFYGEECQFLHEDPSISSLPLHGGGSP
VPMSMAGGGGTPAVYSLGGSVAACPGSAGTGVPKKSETLGPAGASLEGQLLTIPGMEGAT
LSDANLTNSYFSSSFIGVNGFGSPAETKYSMMQRMTTSSSSPSLNDGAKNFSHSTHDPVN
SPTSSLFSDFGALSISQRRKTPNPAASEFVPKGAPRMATMVQSPVQAFPSPLFPHPGLSS
STAAALAPDSLCPILGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPANFMGPTTAADQ
GPHMIQKETVGGTTYFYTDNTPAPMAGMVFPTYHIYPPTAPHVAYMQPKANAPSFFMADE
LRQELINRHLITMAQIDHSENPDVPSEVDSYHSLFPLEALPPPNRMQKTSNFSYITSCYK
AVNSKDDLPYCLRRIHGFRLVNTKCMMLVDMWKKIQHSNAVTLREVFTTKGFGDHSLVFS
YDFHAGAETMFSRHFNDPAADSYFTKRKWGQHEPPPPRQHAGLLPESLIWAYIVQLSSAL
RTIHTAGLACRVMDPSKILITGKTRLRLNCVGVFDVLTFDNSQTNHLALMPQYQQADLVS
LGKVVLALACNSLAGIQRENLQKAMELVSINYSSDLKNLILYLLTEQSRLRSVNDIMPMI
GARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRY
LLKLFRDHLFHQVTEAGTPWIDLSHIVSCLNKLDAGVPEKISLVSRDEKSVLVVTYSDLK
RCFDSTFQELHAAASGSL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtggactcccagcctcacctgctccgcttgggggtgccggaatacccaatgtc
aaggtgaagttttgccgatattacgcgaaagacaaaacctgtttttatggggaagagtgc
cagttcttgcacgaggatccgtccatatcgagtctgccgctgcacggtggcgggagccca
gtcccgatgtcgatggccggaggtggcgggaccccagcggtgtattctctcggcggctcc
gtagcggcctgtccgggcagcgcgggcactggtgtgcccaagaaaagtgaaacattgggt
cctgcaggcgcatctctagaagggcagctgttaacaatcccagggatggaaggtgcaacc
ctgagtgatgccaatctaaccaactcttacttcagcagcagctttattggggtcaatggg
tttggaagtccagcagagactaaatactcaatgatgcagcgtatgactaccagcagcagc
tctcccagtctcaacgatggtgccaagaacttcagccacagcactcatgatccagtgaac
tctccgacatcctcgttgttcagtgattttggtgctcttagtatttcccaaaggagaaag
actcctaacccggcagcaagtgagttcgtccctaagggagctccacgtatggccactatg
gttcagtcccctgtccaggcctttccctcgcctctcttcccacatcctggcctcagcagt
tctacagctgctgccctggctcctgactctctctgtccaattttaggcatgtctctttct
gcgggatcttctcctctccactccccaaaaattacaccacacacctcacctgctccacgt
cggcgcagtcacacaccaaaccctgccaacttcatggggcccacaactgcagctgaccag
ggtcctcacatgatccagaaagaaactgtaggggggaccacctacttctacacggacaac
accccggcaccaatggctgggatggtgtttcctacataccatatctacccccccactgcg
ccccatgtggcttacatgcagccaaaagccaatgccccttcctttttcatggcggatgaa
ctccgacaggagttgataaacagacatctgataaccatggcccagattgaccactcagag
aacccagatgtaccctctgaggtggacagctaccacagcctcttcccgctcgaggccctc
cccccaccaaaccgcatgcagaagaccagcaacttcagctacatcacctcctgttacaag
gctgtcaacagcaaggatgacctgccttactgcctgaggaggatacatggtttccgcctt
gttaacaccaagtgtatgatgctggtggacatgtggaagaaaatccagcactcgaatgct
gtaacactgagagaggtcttcaccacgaagggctttggagaccactcgttggtgttctcc
tatgacttccatgcgggtgcagaaaccatgttcagcagacacttcaatgacccagcagca
gattcgtactttaccaagagaaagtggggacaacatgaacctcccccgccacggcagcat
gcaggtttgctccccgagtctctgatctgggcctacattgtccagctcagctcggccctg
cgcaccatccacactgctggcctggcctgccgtgtcatggatcccagcaagattcttatc
actggcaagacaaggttacgactgaactgtgttggggtgtttgatgtcttaacctttgac
aacagtcagaccaatcatcttgccctgatgccacagtatcagcaagcagacctggtgtcg
ctgggcaaggtggtgctggcgttggcatgtaactcattggctggtattcaaagggagaac
ctgcagaaggccatggagctggtgtccatcaactactcttcagacctcaagaacctcatt
ctgtatctgctgactgaacaatctcgcctgcgcagcgtcaatgacattatgccgatgatt
ggagctcgattctacacgcaactcgatgcatcgcagatgaggaatgatgttattgaggag
gatctagccaaggaggtgcaaaacggccgtctcttccgcctgttggccaagctgggcacc
atcaacgagcggccagagtttcagaaagacccgacgtggtcggagacgggcgaccgttac
ctgttgaagcttttccgggatcacctgtttcaccaggtgacagaagctgggacgccctgg
atcgacctcagccacatcgtctcctgcctcaacaaactggacgctggcgttcctgagaag
atcagcctggtgtcgcgggacgagaagagcgtcctggtcgtgacctactcggacctgaag
cgttgcttcgacagtaccttccaggagctgcacgctgcagcctccggctctctgtag
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